RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 RGPD2P0DJD1 1756 aa18.43■□□□□ 0.54
LIMK2-203ENST00000340552 KIAA0232Q92628 1395 aa18.42■□□□□ 0.54
LIMK2-203ENST00000340552 INTS3Q68E01 1043 aaKnown RBP18.42■□□□□ 0.54
LIMK2-203ENST00000340552 XIRP1Q702N8 1843 aaKnown RBP18.42■□□□□ 0.54
LIMK2-203ENST00000340552 HAP1P54257 671 aaPredicted RBP18.42■□□□□ 0.54
LIMK2-203ENST00000340552 PLCB2Q00722 1185 aa18.42■□□□□ 0.54
LIMK2-203ENST00000340552 SYCP1Q15431 976 aa18.42■□□□□ 0.54
LIMK2-203ENST00000340552 LRRC59Q96AG4 307 aaKnown RBP18.42■□□□□ 0.54
LIMK2-203ENST00000340552 TMX3Q96JJ7 454 aa18.42■□□□□ 0.54
LIMK2-203ENST00000340552 CHMP4AQ9BY43 222 aa18.42■□□□□ 0.54
LIMK2-203ENST00000340552 TSPYL4Q9UJ04 414 aa18.42■□□□□ 0.54
LIMK2-203ENST00000340552 USP48Q86UV5 1035 aa18.41■□□□□ 0.54
LIMK2-203ENST00000340552 KIF18AQ8NI77 898 aa18.41■□□□□ 0.54
LIMK2-203ENST00000340552 MAP3K5Q99683 1374 aa18.41■□□□□ 0.54
LIMK2-203ENST00000340552 TULP2O00295 520 aa18.41■□□□□ 0.54
LIMK2-203ENST00000340552 NPHP3Q7Z494 1330 aa18.41■□□□□ 0.54
LIMK2-203ENST00000340552 ERICH4A6NGS2 130 aa18.39■□□□□ 0.53
LIMK2-203ENST00000340552 C16orf71Q8IYS4 520 aaPredicted RBP18.39■□□□□ 0.53
LIMK2-203ENST00000340552 SPC24Q8NBT2 197 aa18.39■□□□□ 0.53
LIMK2-203ENST00000340552 CCDC183Q5T5S1 534 aa18.39■□□□□ 0.53
LIMK2-203ENST00000340552 ANKRD24Q8TF21 1146 aa18.39■□□□□ 0.53
LIMK2-203ENST00000340552 LRRC37A3O60309 1634 aa18.39■□□□□ 0.53
LIMK2-203ENST00000340552 MED1Q15648 1581 aaPredicted RBP18.39■□□□□ 0.53
LIMK2-203ENST00000340552 IL17REQ8NFR9 667 aa18.38■□□□□ 0.53
LIMK2-203ENST00000340552 AXIN2Q9Y2T1 843 aa18.38■□□□□ 0.53
LIMK2-203ENST00000340552 ZC3H6P61129 1189 aaKnown RBP18.38■□□□□ 0.53
LIMK2-203ENST00000340552 ZNF335Q9H4Z2 1342 aaPredicted RBP18.37■□□□□ 0.53
LIMK2-203ENST00000340552 KRT222Q8N1A0 295 aa18.37■□□□□ 0.53
LIMK2-203ENST00000340552 NEK4P51957 841 aa18.36■□□□□ 0.53
LIMK2-203ENST00000340552 TPRNQ4KMQ1 711 aa18.36■□□□□ 0.53
LIMK2-203ENST00000340552 API5Q9BZZ5 524 aaKnown RBP18.36■□□□□ 0.53
LIMK2-203ENST00000340552 ABCC4O15439 1325 aa18.36■□□□□ 0.53
LIMK2-203ENST00000340552 SMTNL1A8MU46 457 aa18.36■□□□□ 0.53
LIMK2-203ENST00000340552 SDSP20132 328 aa18.36■□□□□ 0.53
LIMK2-203ENST00000340552 OTUD7AQ8TE49 926 aaPredicted RBP18.36■□□□□ 0.53
LIMK2-203ENST00000340552 RGPD5Q99666 1765 aa18.36■□□□□ 0.53
LIMK2-203ENST00000340552 CALCOCO1Q9P1Z2 691 aa18.36■□□□□ 0.53
LIMK2-203ENST00000340552 TRIM6-TRIM34B2RNG4 842 aa18.35■□□□□ 0.53
LIMK2-203ENST00000340552 TPM3P06753 285 aa18.35■□□□□ 0.53
LIMK2-203ENST00000340552 MX1P20591 662 aa18.35■□□□□ 0.53
LIMK2-203ENST00000340552 CUL4AQ13619 759 aa18.35■□□□□ 0.53
LIMK2-203ENST00000340552 C16orf45Q96MC5 204 aaPredicted RBP18.35■□□□□ 0.53
LIMK2-203ENST00000340552 TRIM34Q9BYJ4 488 aa18.35■□□□□ 0.53
LIMK2-203ENST00000340552 TNS3Q68CZ2 1445 aa18.35■□□□□ 0.53
LIMK2-203ENST00000340552 CERS3Q8IU89 383 aa18.35■□□□□ 0.53
LIMK2-203ENST00000340552 PXDNQ92626 1479 aa18.34■□□□□ 0.53
LIMK2-203ENST00000340552 NCAPD2Q15021 1401 aa18.33■□□□□ 0.53
LIMK2-203ENST00000340552 PTGS1P23219 599 aa18.33■□□□□ 0.53
LIMK2-203ENST00000340552 TAF7Q15545 349 aaPredicted RBP18.33■□□□□ 0.53
LIMK2-203ENST00000340552 BRINP3Q76B58 766 aa18.33■□□□□ 0.53
LIMK2-203ENST00000340552 TRERF1Q96PN7 1200 aa18.33■□□□□ 0.53
LIMK2-203ENST00000340552 FUCA2Q9BTY2 467 aa18.33■□□□□ 0.53
LIMK2-203ENST00000340552 PLEKHO1Q53GL0 409 aaPredicted RBP18.33■□□□□ 0.52
LIMK2-203ENST00000340552 NOL8Q76FK4 1167 aaKnown RBP18.33■□□□□ 0.52
LIMK2-203ENST00000340552 CABLES1Q8TDN4 633 aa18.33■□□□□ 0.52
LIMK2-203ENST00000340552 SPATA31A3Q5VYP0 1347 aa18.33■□□□□ 0.52
LIMK2-203ENST00000340552 REC8O95072 547 aa18.32■□□□□ 0.52
LIMK2-203ENST00000340552 IRX3P78415 501 aaPredicted RBP18.32■□□□□ 0.52
LIMK2-203ENST00000340552 ST7Q9NRC1 585 aa18.32■□□□□ 0.52
LIMK2-203ENST00000340552 ERBB3P21860 1342 aa18.32■□□□□ 0.52
LIMK2-203ENST00000340552 FAM53CQ9NYF3 392 aa18.32■□□□□ 0.52
LIMK2-203ENST00000340552 KMT5BQ4FZB7 885 aa18.31■□□□□ 0.52
LIMK2-203ENST00000340552 ZNF530Q6P9A1 599 aaPredicted RBP18.31■□□□□ 0.52
LIMK2-203ENST00000340552 CASC1Q6TDU7 716 aa18.31■□□□□ 0.52
LIMK2-203ENST00000340552 BABAM1Q9NWV8 329 aa18.31■□□□□ 0.52
LIMK2-203ENST00000340552 CEMIPQ8WUJ3 1361 aa18.31■□□□□ 0.52
LIMK2-203ENST00000340552 SLC4A2P04920 1241 aa18.31■□□□□ 0.52
LIMK2-203ENST00000340552 AMOTQ4VCS5 1084 aa18.31■□□□□ 0.52
LIMK2-203ENST00000340552 CAMTA1Q9Y6Y1 1673 aa18.31■□□□□ 0.52
LIMK2-203ENST00000340552 GOLGA6L6A8MZA4 724 aa18.3■□□□□ 0.52
LIMK2-203ENST00000340552 GIMAP6Q6P9H5 292 aa18.3■□□□□ 0.52
LIMK2-203ENST00000340552 TMEM87AQ8NBN3 555 aa18.3■□□□□ 0.52
LIMK2-203ENST00000340552 TNNT1P13805 278 aa18.3■□□□□ 0.52
LIMK2-203ENST00000340552 AKAP4Q5JQC9 854 aa18.3■□□□□ 0.52
LIMK2-203ENST00000340552 DCTPP1Q9H773 170 aa18.3■□□□□ 0.52
LIMK2-203ENST00000340552 LGR6Q9HBX8 967 aa18.3■□□□□ 0.52
LIMK2-203ENST00000340552 CNPY2Q9Y2B0 182 aa18.3■□□□□ 0.52
LIMK2-203ENST00000340552 LRMPQ12912 555 aa18.3■□□□□ 0.52
LIMK2-203ENST00000340552 CCDC112Q8NEF3 446 aa18.3■□□□□ 0.52
LIMK2-203ENST00000340552 INTS4Q96HW7 963 aaKnown RBP18.3■□□□□ 0.52
LIMK2-203ENST00000340552 SLAIN2Q9P270 581 aa18.3■□□□□ 0.52
LIMK2-203ENST00000340552 PTPRCP08575 1304 aa18.3■□□□□ 0.52
LIMK2-203ENST00000340552 ERC2O15083 957 aa18.29■□□□□ 0.52
LIMK2-203ENST00000340552 LMO7Q8WWI1 1683 aa18.29■□□□□ 0.52
LIMK2-203ENST00000340552 ZNF397Q8NF99 534 aaPredicted RBP18.29■□□□□ 0.52
LIMK2-203ENST00000340552 SRCIN1Q9C0H9 1055 aa18.29■□□□□ 0.52
LIMK2-203ENST00000340552 RGS12O14924 1447 aa18.29■□□□□ 0.52
LIMK2-203ENST00000340552 MCM2P49736 904 aa18.28■□□□□ 0.52
LIMK2-203ENST00000340552 RPAP1Q9BWH6 1393 aaPredicted RBP18.28■□□□□ 0.52
LIMK2-203ENST00000340552 ZFP91Q96JP5 570 aaPredicted RBP18.28■□□□□ 0.52
LIMK2-203ENST00000340552 FEZ2Q9UHY8 353 aaPredicted RBP18.28■□□□□ 0.52
LIMK2-203ENST00000340552 RBM6P78332 1123 aaKnown RBP18.27■□□□□ 0.52
LIMK2-203ENST00000340552 C1orf141Q5JVX7 400 aa18.27■□□□□ 0.52
LIMK2-203ENST00000340552 COL18A1P39060 1754 aa18.27■□□□□ 0.52
LIMK2-203ENST00000340552 WDR33Q9C0J8 1336 aaKnown RBP18.27■□□□□ 0.52
LIMK2-203ENST00000340552 MPRIPQ6WCQ1 1025 aa18.27■□□□□ 0.51
LIMK2-203ENST00000340552 NLRP2Q9NX02 1062 aa18.27■□□□□ 0.51
LIMK2-203ENST00000340552 PAXBP1Q9Y5B6 917 aa18.27■□□□□ 0.51
LIMK2-203ENST00000340552 CRYBG1Q9Y4K1 1723 aa18.27■□□□□ 0.51
LIMK2-203ENST00000340552 CHRNA2Q15822 529 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms