RNA–Protein interactions for RNA: ENST00000340398.4

H3F3C-201, Transcript of H3 histone family member 3C, humanhuman

APPRIS P1 BASIC

Gene H3F3C, Length 1,057 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3C-201ENST00000340398 PDZRN3Q9UPQ7 1066 aa21.8■■□□□ 1.08
H3F3C-201ENST00000340398 COL11A2P13942 1736 aaPredicted RBP21.8■■□□□ 1.08
H3F3C-201ENST00000340398 SLX4Q8IY92 1834 aa21.79■■□□□ 1.08
H3F3C-201ENST00000340398 SMC1BQ8NDV3 1235 aa21.79■■□□□ 1.08
H3F3C-201ENST00000340398 KLRG1Q96E93 195 aa21.79■■□□□ 1.08
H3F3C-201ENST00000340398 SRGNP10124 158 aa21.78■■□□□ 1.08
H3F3C-201ENST00000340398 ST5P78524 1137 aa21.78■■□□□ 1.08
H3F3C-201ENST00000340398 ERFEQ4G0M1 354 aa21.78■■□□□ 1.08
H3F3C-201ENST00000340398 TAF7Q15545 349 aaPredicted RBP21.77■■□□□ 1.08
H3F3C-201ENST00000340398 STYK1Q6J9G0 422 aa21.77■■□□□ 1.08
H3F3C-201ENST00000340398 CNKSR1Q969H4 720 aa21.77■■□□□ 1.08
H3F3C-201ENST00000340398 FER1L6Q2WGJ9 1857 aa21.77■■□□□ 1.08
H3F3C-201ENST00000340398 PCNTO95613 3336 aa21.76■■□□□ 1.07
H3F3C-201ENST00000340398 FAM177BA6PVY3 158 aa21.76■■□□□ 1.07
H3F3C-201ENST00000340398 HTATSF1O43719 755 aaKnown RBP21.76■■□□□ 1.07
H3F3C-201ENST00000340398 CACNA1SQ13698 1873 aa21.76■■□□□ 1.07
H3F3C-201ENST00000340398 DPY19L2Q6NUT2 758 aa21.76■■□□□ 1.07
H3F3C-201ENST00000340398 PRPF40BQ6NWY9 871 aaKnown RBP21.76■■□□□ 1.07
H3F3C-201ENST00000340398 CLEC4GQ6UXB4 293 aa21.76■■□□□ 1.07
H3F3C-201ENST00000340398 NBPF5PQ86XG9 351 aaPredicted RBP21.76■■□□□ 1.07
H3F3C-201ENST00000340398 MASTLQ96GX5 879 aa21.76■■□□□ 1.07
H3F3C-201ENST00000340398 TIAM2Q8IVF5 1701 aa21.75■■□□□ 1.07
H3F3C-201ENST00000340398 BCORQ6W2J9 1755 aa21.75■■□□□ 1.07
H3F3C-201ENST00000340398 HLFQ16534 295 aa21.75■■□□□ 1.07
H3F3C-201ENST00000340398 NGEFQ8N5V2 710 aa21.74■■□□□ 1.07
H3F3C-201ENST00000340398 NIP7Q9Y221 180 aaKnown RBP eCLIP21.74■■□□□ 1.07
H3F3C-201ENST00000340398 TAOK3Q9H2K8 898 aa21.73■■□□□ 1.07
H3F3C-201ENST00000340398 ZNF652Q9Y2D9 606 aa21.73■■□□□ 1.07
H3F3C-201ENST00000340398 DICER1Q9UPY3 1922 aaKnown RBP21.72■■□□□ 1.07
H3F3C-201ENST00000340398 DDNO94850 711 aaPredicted RBP21.72■■□□□ 1.07
H3F3C-201ENST00000340398 JMYQ8N9B5 988 aa21.72■■□□□ 1.07
H3F3C-201ENST00000340398 C7orf43Q8WVR3 580 aa21.72■■□□□ 1.07
H3F3C-201ENST00000340398 OLFM4Q6UX06 510 aa21.71■■□□□ 1.07
H3F3C-201ENST00000340398 TPTE2Q6XPS3 522 aa21.71■■□□□ 1.07
H3F3C-201ENST00000340398 THUMPD2Q9BTF0 503 aaKnown RBP21.71■■□□□ 1.07
H3F3C-201ENST00000340398 LTBP3Q9NS15 1303 aa21.71■■□□□ 1.07
H3F3C-201ENST00000340398 PLEKHF1Q96S99 279 aa21.7■■□□□ 1.06
H3F3C-201ENST00000340398 KLRG2A4D1S0 409 aaPredicted RBP21.69■■□□□ 1.06
H3F3C-201ENST00000340398 NPR1P16066 1061 aa21.69■■□□□ 1.06
H3F3C-201ENST00000340398 DLG5Q8TDM6 1919 aa21.68■■□□□ 1.06
H3F3C-201ENST00000340398 POTEIP0CG38 1075 aa21.68■■□□□ 1.06
H3F3C-201ENST00000340398 POTEJP0CG39 1038 aa21.68■■□□□ 1.06
H3F3C-201ENST00000340398 RRP7AQ9Y3A4 280 aaKnown RBP21.68■■□□□ 1.06
H3F3C-201ENST00000340398 NEFMP07197 916 aa21.66■■□□□ 1.06
H3F3C-201ENST00000340398 EIF4A1P60842 406 aaKnown RBP21.66■■□□□ 1.06
H3F3C-201ENST00000340398 SOGA3Q5TF21 947 aa21.66■■□□□ 1.06
H3F3C-201ENST00000340398 TTLL7Q6ZT98 887 aa21.66■■□□□ 1.06
H3F3C-201ENST00000340398 ZNF277Q9NRM2 450 aaPredicted RBP21.66■■□□□ 1.06
H3F3C-201ENST00000340398 GTF2E1P29083 439 aaPredicted RBP21.65■■□□□ 1.06
H3F3C-201ENST00000340398 NFE2L2Q16236 605 aa21.65■■□□□ 1.06
H3F3C-201ENST00000340398 CCDC93Q567U6 631 aa21.65■■□□□ 1.06
H3F3C-201ENST00000340398 COL13A1Q5TAT6 717 aaPredicted RBP21.65■■□□□ 1.06
H3F3C-201ENST00000340398 NUTM1Q86Y26 1132 aa21.65■■□□□ 1.06
H3F3C-201ENST00000340398 ARFGEF2Q9Y6D5 1785 aa21.65■■□□□ 1.06
H3F3C-201ENST00000340398 RGL2O15211 777 aa21.64■■□□□ 1.05
H3F3C-201ENST00000340398 MYL6BP14649 208 aa21.64■■□□□ 1.05
H3F3C-201ENST00000340398 PNISRQ8TF01 805 aaKnown RBP21.64■■□□□ 1.05
H3F3C-201ENST00000340398 GPTP24298 496 aa21.62■■□□□ 1.05
H3F3C-201ENST00000340398 FKBP4Q02790 459 aaKnown RBP eCLIP21.62■■□□□ 1.05
H3F3C-201ENST00000340398 CHADLQ6NUI6 762 aa21.62■■□□□ 1.05
H3F3C-201ENST00000340398 MAP3K15Q6ZN16 1313 aa21.61■■□□□ 1.05
H3F3C-201ENST00000340398 ERVV-1B6SEH8 477 aa21.61■■□□□ 1.05
H3F3C-201ENST00000340398 ALDH1B1P30837 517 aa21.61■■□□□ 1.05
H3F3C-201ENST00000340398 SYNE4Q8N205 404 aa21.61■■□□□ 1.05
H3F3C-201ENST00000340398 NUP98P52948 1817 aa21.61■■□□□ 1.05
H3F3C-201ENST00000340398 KDM3BQ7LBC6 1761 aa21.61■■□□□ 1.05
H3F3C-201ENST00000340398 ZBTB3Q9H5J0 574 aa21.6■■□□□ 1.05
H3F3C-201ENST00000340398 ABCC12Q96J65 1359 aa21.6■■□□□ 1.05
H3F3C-201ENST00000340398 SUSD4Q5VX71 490 aa21.59■■□□□ 1.05
H3F3C-201ENST00000340398 KIF6Q6ZMV9 814 aa21.59■■□□□ 1.05
H3F3C-201ENST00000340398 RTKN2Q8IZC4 609 aa21.59■■□□□ 1.05
H3F3C-201ENST00000340398 LAMB4A4D0S4 1761 aa21.59■■□□□ 1.05
H3F3C-201ENST00000340398 ZNF541Q9H0D2 1346 aa21.58■■□□□ 1.05
H3F3C-201ENST00000340398 NYXQ9GZU5 481 aa21.58■■□□□ 1.05
H3F3C-201ENST00000340398 TAF1DQ9H5J8 278 aaPredicted RBP21.58■■□□□ 1.05
H3F3C-201ENST00000340398 UBN2Q6ZU65 1347 aa21.57■■□□□ 1.04
H3F3C-201ENST00000340398 MAPK8IP3Q9UPT6 1336 aa21.57■■□□□ 1.04
H3F3C-201ENST00000340398 CRY2Q49AN0 593 aa21.57■■□□□ 1.04
H3F3C-201ENST00000340398 SLC51AQ86UW1 340 aa21.57■■□□□ 1.04
H3F3C-201ENST00000340398 PNNQ9H307 717 aaKnown RBP21.57■■□□□ 1.04
H3F3C-201ENST00000340398 HSPA1AP0DMV8 641 aaKnown RBP21.56■■□□□ 1.04
H3F3C-201ENST00000340398 HSPA1BP0DMV9 641 aaKnown RBP21.56■■□□□ 1.04
H3F3C-201ENST00000340398 EIF2S2P20042 333 aaKnown RBP21.56■■□□□ 1.04
H3F3C-201ENST00000340398 IARSP41252 1262 aaKnown RBP21.56■■□□□ 1.04
H3F3C-201ENST00000340398 L3MBTL3Q96JM7 780 aaPredicted RBP21.56■■□□□ 1.04
H3F3C-201ENST00000340398 MKRN1Q9UHC7 482 aaKnown RBP21.56■■□□□ 1.04
H3F3C-201ENST00000340398 TSPYL4Q9UJ04 414 aa21.56■■□□□ 1.04
H3F3C-201ENST00000340398 IQCA1LA6NCM1 817 aa21.55■■□□□ 1.04
H3F3C-201ENST00000340398 TCERG1O14776 1098 aaKnown RBP21.55■■□□□ 1.04
H3F3C-201ENST00000340398 RIPK4P57078 832 aa21.55■■□□□ 1.04
H3F3C-201ENST00000340398 EAPPQ56P03 285 aaPredicted RBP21.55■■□□□ 1.04
H3F3C-201ENST00000340398 ZNF34Q8IZ26 560 aa21.55■■□□□ 1.04
H3F3C-201ENST00000340398 ANXA1P04083 346 aa21.54■■□□□ 1.04
H3F3C-201ENST00000340398 C3orf67Q6ZVT6 689 aa21.54■■□□□ 1.04
H3F3C-201ENST00000340398 LDHDQ86WU2 507 aa21.54■■□□□ 1.04
H3F3C-201ENST00000340398 CREBZFQ9NS37 354 aa21.54■■□□□ 1.04
H3F3C-201ENST00000340398 FZD9O00144 591 aa21.53■■□□□ 1.04
H3F3C-201ENST00000340398 PDIA6Q15084 440 aa21.53■■□□□ 1.04
H3F3C-201ENST00000340398 GIGYF2Q6Y7W6 1299 aaKnown RBP21.53■■□□□ 1.04
H3F3C-201ENST00000340398 RPGRQ92834 1020 aaKnown RBP21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms