RNA–Protein interactions for RNA: ENST00000339647.5

UBC-201, Transcript of ubiquitin C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBC, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-201ENST00000339647 ZNF75DP51815 510 aa23.98■■□□□ 1.43
UBC-201ENST00000339647 MTHFSDQ2M296 383 aaKnown RBP23.98■■□□□ 1.43
UBC-201ENST00000339647 PTH1RQ03431 593 aa23.97■■□□□ 1.43
UBC-201ENST00000339647 GABPB1Q06547 395 aaPredicted RBP23.97■■□□□ 1.43
UBC-201ENST00000339647 ME3Q16798 604 aa23.97■■□□□ 1.43
UBC-201ENST00000339647 TPD52L1Q16890 204 aaPredicted RBP23.97■■□□□ 1.43
UBC-201ENST00000339647 CACTINQ8WUQ7 758 aaKnown RBP23.97■■□□□ 1.43
UBC-201ENST00000339647 ZNF592Q92610 1267 aa23.97■■□□□ 1.43
UBC-201ENST00000339647 DACT1Q9NYF0 836 aa23.97■■□□□ 1.43
UBC-201ENST00000339647 PLA2G4DQ86XP0 818 aa23.97■■□□□ 1.43
UBC-201ENST00000339647 TNMDQ9H2S6 317 aa23.97■■□□□ 1.43
UBC-201ENST00000339647 SOX12O15370 315 aa23.97■■□□□ 1.43
UBC-201ENST00000339647 UBTFL1P0CB47 393 aaPredicted RBP23.97■■□□□ 1.43
UBC-201ENST00000339647 CDC37L1Q7L3B6 337 aa23.97■■□□□ 1.43
UBC-201ENST00000339647 CNTROBQ8N137 903 aa23.97■■□□□ 1.43
UBC-201ENST00000339647 RHPN1Q8TCX5 695 aa23.97■■□□□ 1.43
UBC-201ENST00000339647 SSH3Q8TE77 659 aa23.97■■□□□ 1.43
UBC-201ENST00000339647 GTF2E1P29083 439 aaPredicted RBP23.96■■□□□ 1.43
UBC-201ENST00000339647 KRT85P78386 507 aa23.96■■□□□ 1.43
UBC-201ENST00000339647 PRPF40BQ6NWY9 871 aaKnown RBP23.96■■□□□ 1.43
UBC-201ENST00000339647 PPP1R42Q7Z4L9 355 aa23.96■■□□□ 1.43
UBC-201ENST00000339647 KIF18AQ8NI77 898 aa23.96■■□□□ 1.43
UBC-201ENST00000339647 MORC2Q9Y6X9 1032 aaPredicted RBP23.96■■□□□ 1.43
UBC-201ENST00000339647 CCDC144BQ3MJ40 725 aa23.96■■□□□ 1.43
UBC-201ENST00000339647 LARP1BQ659C4 914 aaKnown RBP23.96■■□□□ 1.43
UBC-201ENST00000339647 CCDC144CPQ8IYA2 1237 aa23.96■■□□□ 1.43
UBC-201ENST00000339647 PAXBP1Q9Y5B6 917 aa23.96■■□□□ 1.43
UBC-201ENST00000339647 CCDC61Q9Y6R9 512 aa23.96■■□□□ 1.43
UBC-201ENST00000339647 DLC1Q96QB1 1528 aa23.95■■□□□ 1.43
UBC-201ENST00000339647 ZBTB22O15209 634 aa23.95■■□□□ 1.42
UBC-201ENST00000339647 VPS53Q5VIR6 699 aa23.95■■□□□ 1.42
UBC-201ENST00000339647 TFIP11Q9UBB9 837 aaKnown RBP23.95■■□□□ 1.42
UBC-201ENST00000339647 NRKQ7Z2Y5 1582 aa23.94■■□□□ 1.42
UBC-201ENST00000339647 TAF3Q5VWG9 929 aa23.94■■□□□ 1.42
UBC-201ENST00000339647 TXNDC2Q86VQ3 553 aa23.94■■□□□ 1.42
UBC-201ENST00000339647 ARHGEF10O15013 1369 aa23.93■■□□□ 1.42
UBC-201ENST00000339647 ZSCAN31Q96LW9 406 aaPredicted RBP23.93■■□□□ 1.42
UBC-201ENST00000339647 SH2B1Q9NRF2 756 aaPredicted RBP23.93■■□□□ 1.42
UBC-201ENST00000339647 TMEM51Q9NW97 253 aa23.93■■□□□ 1.42
UBC-201ENST00000339647 CLIP2Q9UDT6 1046 aa23.93■■□□□ 1.42
UBC-201ENST00000339647 NOL12Q9UGY1 213 aaKnown RBP eCLIP23.93■■□□□ 1.42
UBC-201ENST00000339647 V9GYY5 206 aaPredicted RBP23.93■■□□□ 1.42
UBC-201ENST00000339647 COL9A3Q14050 684 aaPredicted RBP23.93■■□□□ 1.42
UBC-201ENST00000339647 CCDC30Q5VVM6 783 aa23.93■■□□□ 1.42
UBC-201ENST00000339647 CYP46A1Q9Y6A2 500 aa23.93■■□□□ 1.42
UBC-201ENST00000339647 MAP3K19Q56UN5 1328 aa23.92■■□□□ 1.42
UBC-201ENST00000339647 RAB11FIP3O75154 756 aa23.92■■□□□ 1.42
UBC-201ENST00000339647 CEP135Q66GS9 1140 aa23.92■■□□□ 1.42
UBC-201ENST00000339647 ZSWIM6Q9HCJ5 1215 aa23.92■■□□□ 1.42
UBC-201ENST00000339647 DNAJC25Q9H1X3 360 aa23.92■■□□□ 1.42
UBC-201ENST00000339647 TPCN1Q9ULQ1 816 aa23.92■■□□□ 1.42
UBC-201ENST00000339647 USP27XA6NNY8 438 aa23.91■■□□□ 1.42
UBC-201ENST00000339647 ARID5BQ14865 1188 aa23.91■■□□□ 1.42
UBC-201ENST00000339647 TDRD7Q8NHU6 1098 aaKnown RBP23.91■■□□□ 1.42
UBC-201ENST00000339647 KMT5BQ4FZB7 885 aa23.91■■□□□ 1.42
UBC-201ENST00000339647 XRN1Q8IZH2 1706 aaKnown RBP23.91■■□□□ 1.42
UBC-201ENST00000339647 ZNF165P49910 485 aa23.9■■□□□ 1.42
UBC-201ENST00000339647 TERF2Q15554 542 aa23.9■■□□□ 1.42
UBC-201ENST00000339647 GOLGA6L4A6NEF3 574 aa23.9■■□□□ 1.42
UBC-201ENST00000339647 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.9■■□□□ 1.42
UBC-201ENST00000339647 ELP1O95163 1332 aa23.9■■□□□ 1.42
UBC-201ENST00000339647 ZNF215Q9UL58 517 aaPredicted RBP23.89■■□□□ 1.42
UBC-201ENST00000339647 TTC21AQ8NDW8 1320 aa23.89■■□□□ 1.42
UBC-201ENST00000339647 SRGAP3O43295 1099 aa23.89■■□□□ 1.41
UBC-201ENST00000339647 POLA2Q14181 598 aa23.89■■□□□ 1.41
UBC-201ENST00000339647 KIF1BPQ96EK5 621 aa23.89■■□□□ 1.41
UBC-201ENST00000339647 MON2Q7Z3U7 1717 aa23.89■■□□□ 1.41
UBC-201ENST00000339647 NR1I2O75469 434 aa23.88■■□□□ 1.41
UBC-201ENST00000339647 SPATA32Q96LK8 384 aa23.88■■□□□ 1.41
UBC-201ENST00000339647 CLSTN2Q9H4D0 955 aa23.88■■□□□ 1.41
UBC-201ENST00000339647 C3P01024 1663 aa23.88■■□□□ 1.41
UBC-201ENST00000339647 RIMS1Q86UR5 1692 aaKnown RBP23.88■■□□□ 1.41
UBC-201ENST00000339647 KRT222Q8N1A0 295 aa23.87■■□□□ 1.41
UBC-201ENST00000339647 PRR36Q9H6K5 1346 aa23.87■■□□□ 1.41
UBC-201ENST00000339647 RBM43Q6ZSC3 357 aaKnown RBP23.87■■□□□ 1.41
UBC-201ENST00000339647 TCEANC2Q96MN5 208 aa23.87■■□□□ 1.41
UBC-201ENST00000339647 TM6SF1Q9BZW5 370 aa23.87■■□□□ 1.41
UBC-201ENST00000339647 PHAXQ9H814 394 aaKnown RBP23.87■■□□□ 1.41
UBC-201ENST00000339647 LRRC8AQ8IWT6 810 aa23.86■■□□□ 1.41
UBC-201ENST00000339647 ZNF397Q8NF99 534 aaPredicted RBP23.86■■□□□ 1.41
UBC-201ENST00000339647 DDX19AQ9NUU7 478 aaKnown RBP23.86■■□□□ 1.41
UBC-201ENST00000339647 LEO1Q8WVC0 666 aaPredicted RBP23.86■■□□□ 1.41
UBC-201ENST00000339647 TTC21BQ7Z4L5 1316 aa23.85■■□□□ 1.41
UBC-201ENST00000339647 CEBPAP49715 358 aaPredicted RBP23.85■■□□□ 1.41
UBC-201ENST00000339647 NECTIN1Q15223 517 aa23.85■■□□□ 1.41
UBC-201ENST00000339647 PGBD1Q96JS3 809 aa23.85■■□□□ 1.41
UBC-201ENST00000339647 PEAK1Q9H792 1746 aa23.84■■□□□ 1.41
UBC-201ENST00000339647 NBPF7P0C2Y1 421 aaPredicted RBP23.84■■□□□ 1.41
UBC-201ENST00000339647 LARP1Q6PKG0 1096 aaKnown RBP23.84■■□□□ 1.41
UBC-201ENST00000339647 SCAND2PQ9GZW5 306 aaPredicted RBP23.84■■□□□ 1.41
UBC-201ENST00000339647 ST7Q9NRC1 585 aa23.84■■□□□ 1.41
UBC-201ENST00000339647 FBXO38Q6PIJ6 1188 aa23.84■■□□□ 1.41
UBC-201ENST00000339647 RUFY2Q8WXA3 655 aa23.84■■□□□ 1.41
UBC-201ENST00000339647 NPHP3Q7Z494 1330 aa23.84■■□□□ 1.41
UBC-201ENST00000339647 BICD2Q8TD16 824 aa23.83■■□□□ 1.41
UBC-201ENST00000339647 KCNB2Q92953 911 aa23.83■■□□□ 1.41
UBC-201ENST00000339647 TRMT1Q9NXH9 659 aaKnown RBP23.83■■□□□ 1.41
UBC-201ENST00000339647 KCNJ4P48050 445 aa23.83■■□□□ 1.4
UBC-201ENST00000339647 PTPN14Q15678 1187 aa23.83■■□□□ 1.4
UBC-201ENST00000339647 ELF2Q15723 593 aa23.83■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms