RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 CLEC4GQ6UXB4 293 aa27.38■■□□□ 1.97
RAB28-203ENST00000338176 PDIA6Q15084 440 aa27.37■■□□□ 1.97
RAB28-203ENST00000338176 DALRD3Q5D0E6 543 aaKnown RBP27.37■■□□□ 1.97
RAB28-203ENST00000338176 ARHGAP27Q6ZUM4 889 aa27.37■■□□□ 1.97
RAB28-203ENST00000338176 C2CD5Q86YS7 1000 aa27.37■■□□□ 1.97
RAB28-203ENST00000338176 ZNF652Q9Y2D9 606 aa27.37■■□□□ 1.97
RAB28-203ENST00000338176 ARFGEF1Q9Y6D6 1849 aa27.36■■□□□ 1.97
RAB28-203ENST00000338176 FAM177BA6PVY3 158 aa27.36■■□□□ 1.97
RAB28-203ENST00000338176 CNBD1Q8NA66 436 aa27.36■■□□□ 1.97
RAB28-203ENST00000338176 NIP7Q9Y221 180 aaKnown RBP eCLIP27.36■■□□□ 1.97
RAB28-203ENST00000338176 LRP10Q7Z4F1 713 aa27.35■■□□□ 1.97
RAB28-203ENST00000338176 ZBTB3Q9H5J0 574 aa27.35■■□□□ 1.97
RAB28-203ENST00000338176 DLEC1Q9Y238 1755 aa27.35■■□□□ 1.97
RAB28-203ENST00000338176 CFAP44Q96MT7 982 aa27.35■■□□□ 1.97
RAB28-203ENST00000338176 MBIPQ9NS73 344 aa27.35■■□□□ 1.97
RAB28-203ENST00000338176 NUP98P52948 1817 aa27.34■■□□□ 1.97
RAB28-203ENST00000338176 MAP3K15Q6ZN16 1313 aa27.34■■□□□ 1.97
RAB28-203ENST00000338176 COL11A2P13942 1736 aaPredicted RBP27.34■■□□□ 1.97
RAB28-203ENST00000338176 NPHP1O15259 732 aa27.34■■□□□ 1.97
RAB28-203ENST00000338176 NBPF5PQ86XG9 351 aaPredicted RBP27.33■■□□□ 1.97
RAB28-203ENST00000338176 BRIP1Q9BX63 1249 aa27.33■■□□□ 1.97
RAB28-203ENST00000338176 ZNF853P0CG23 659 aa27.32■■□□□ 1.96
RAB28-203ENST00000338176 H0YIN7 160 aa27.32■■□□□ 1.96
RAB28-203ENST00000338176 KIF6Q6ZMV9 814 aa27.32■■□□□ 1.96
RAB28-203ENST00000338176 ERBB4Q15303 1308 aa27.32■■□□□ 1.96
RAB28-203ENST00000338176 ERVV-1B6SEH8 477 aa27.3■■□□□ 1.96
RAB28-203ENST00000338176 ATP10DQ9P241 1426 aa27.3■■□□□ 1.96
RAB28-203ENST00000338176 ST5P78524 1137 aa27.3■■□□□ 1.96
RAB28-203ENST00000338176 ZNF622Q969S3 477 aaKnown RBP eCLIP27.3■■□□□ 1.962e-6■□□□□ 10.3
RAB28-203ENST00000338176 ADCY9O60503 1353 aa27.3■■□□□ 1.96
RAB28-203ENST00000338176 GPTP24298 496 aa27.29■■□□□ 1.96
RAB28-203ENST00000338176 PDE6BP35913 854 aa27.29■■□□□ 1.96
RAB28-203ENST00000338176 RGL2O15211 777 aa27.28■■□□□ 1.96
RAB28-203ENST00000338176 TTLL6Q8N841 843 aa27.28■■□□□ 1.96
RAB28-203ENST00000338176 IFT57Q9NWB7 429 aa27.28■■□□□ 1.96
RAB28-203ENST00000338176 AIMP1Q12904 312 aaKnown RBP27.27■■□□□ 1.96
RAB28-203ENST00000338176 ZNF526Q8TF50 670 aaPredicted RBP27.27■■□□□ 1.96
RAB28-203ENST00000338176 CHPF2Q9P2E5 772 aa27.27■■□□□ 1.96
RAB28-203ENST00000338176 UBN2Q6ZU65 1347 aa27.27■■□□□ 1.96
RAB28-203ENST00000338176 DUSP27Q5VZP5 1158 aa27.27■■□□□ 1.96
RAB28-203ENST00000338176 HDGFL1Q5TGJ6 251 aa27.26■■□□□ 1.95
RAB28-203ENST00000338176 COPS6Q7L5N1 327 aa27.26■■□□□ 1.95
RAB28-203ENST00000338176 XAGE3Q8WTP9 111 aa27.26■■□□□ 1.95
RAB28-203ENST00000338176 ZNF219Q9P2Y4 722 aaPredicted RBP27.26■■□□□ 1.95
RAB28-203ENST00000338176 ELL2O00472 640 aaPredicted RBP27.25■■□□□ 1.95
RAB28-203ENST00000338176 GNAI1P63096 354 aa27.25■■□□□ 1.95
RAB28-203ENST00000338176 TPTE2Q6XPS3 522 aa27.25■■□□□ 1.95
RAB28-203ENST00000338176 NUTM1Q86Y26 1132 aa27.25■■□□□ 1.95
RAB28-203ENST00000338176 CACNA1SQ13698 1873 aa27.25■■□□□ 1.95
RAB28-203ENST00000338176 DDX21Q9NR30 783 aaKnown RBP eCLIP27.25■■□□□ 1.95
RAB28-203ENST00000338176 SALL2Q9Y467 1007 aaPredicted RBP27.25■■□□□ 1.95
RAB28-203ENST00000338176 RASSF7Q02833 373 aa27.24■■□□□ 1.95
RAB28-203ENST00000338176 GIGYF2Q6Y7W6 1299 aaKnown RBP27.24■■□□□ 1.95
RAB28-203ENST00000338176 SRGNP10124 158 aa27.23■■□□□ 1.95
RAB28-203ENST00000338176 CALD1Q05682 793 aaKnown RBP27.23■■□□□ 1.95
RAB28-203ENST00000338176 ABCC12Q96J65 1359 aa27.23■■□□□ 1.95
RAB28-203ENST00000338176 SUSD4Q5VX71 490 aa27.22■■□□□ 1.95
RAB28-203ENST00000338176 WWC1Q8IX03 1113 aa27.22■■□□□ 1.95
RAB28-203ENST00000338176 ZNF34Q8IZ26 560 aa27.22■■□□□ 1.95
RAB28-203ENST00000338176 FAM9BQ8IZU0 186 aa27.22■■□□□ 1.95
RAB28-203ENST00000338176 C8orf58Q8NAV2 365 aa27.22■■□□□ 1.95
RAB28-203ENST00000338176 TNRC6CQ9HCJ0 1690 aaKnown RBP27.22■■□□□ 1.95
RAB28-203ENST00000338176 C9orf131Q5VYM1 1079 aa27.22■■□□□ 1.95
RAB28-203ENST00000338176 TSR2Q969E8 191 aaKnown RBP27.22■■□□□ 1.95
RAB28-203ENST00000338176 SLX4Q8IY92 1834 aa27.21■■□□□ 1.95
RAB28-203ENST00000338176 ERFEQ4G0M1 354 aa27.21■■□□□ 1.95
RAB28-203ENST00000338176 HOXB7P09629 217 aa27.2■■□□□ 1.95
RAB28-203ENST00000338176 GTF2E1P29083 439 aaPredicted RBP27.2■■□□□ 1.95
RAB28-203ENST00000338176 SBF1O95248 1867 aa27.2■■□□□ 1.95
RAB28-203ENST00000338176 C21orf2O43822 256 aa27.2■■□□□ 1.94
RAB28-203ENST00000338176 PRELPP51888 382 aa27.2■■□□□ 1.94
RAB28-203ENST00000338176 ZNF428Q96B54 188 aa27.2■■□□□ 1.94
RAB28-203ENST00000338176 PDZRN3Q9UPQ7 1066 aa27.2■■□□□ 1.94
RAB28-203ENST00000338176 CCDC27Q2M243 656 aa27.19■■□□□ 1.94
RAB28-203ENST00000338176 MASTLQ96GX5 879 aa27.19■■□□□ 1.94
RAB28-203ENST00000338176 STYK1Q6J9G0 422 aa27.18■■□□□ 1.94
RAB28-203ENST00000338176 TSPYL6Q8N831 410 aa27.17■■□□□ 1.94
RAB28-203ENST00000338176 RNF181Q9P0P0 153 aa27.17■■□□□ 1.94
RAB28-203ENST00000338176 KLRG2A4D1S0 409 aaPredicted RBP27.17■■□□□ 1.94
RAB28-203ENST00000338176 NTSR2O95665 410 aa27.17■■□□□ 1.94
RAB28-203ENST00000338176 PRPF40BQ6NWY9 871 aaKnown RBP27.17■■□□□ 1.94
RAB28-203ENST00000338176 NYXQ9GZU5 481 aa27.17■■□□□ 1.94
RAB28-203ENST00000338176 DBF4Q9UBU7 674 aaPredicted RBP27.17■■□□□ 1.94
RAB28-203ENST00000338176 NFKBIEO00221 500 aa27.16■■□□□ 1.94
RAB28-203ENST00000338176 GPBP1L1Q9HC44 474 aaPredicted RBP27.16■■□□□ 1.94
RAB28-203ENST00000338176 CNKSR1Q969H4 720 aa27.15■■□□□ 1.94
RAB28-203ENST00000338176 ANKRD36CQ5JPF3 1778 aa27.15■■□□□ 1.94
RAB28-203ENST00000338176 CCDC88AQ3V6T2 1871 aa27.14■■□□□ 1.93
RAB28-203ENST00000338176 NPR1P16066 1061 aa27.14■■□□□ 1.93
RAB28-203ENST00000338176 C3orf67Q6ZVT6 689 aa27.14■■□□□ 1.93
RAB28-203ENST00000338176 ARFGEF2Q9Y6D5 1785 aa27.13■■□□□ 1.93
RAB28-203ENST00000338176 PHAXQ9H814 394 aaKnown RBP27.13■■□□□ 1.93
RAB28-203ENST00000338176 OLFM4Q6UX06 510 aa27.12■■□□□ 1.93
RAB28-203ENST00000338176 SYNE4Q8N205 404 aa27.12■■□□□ 1.93
RAB28-203ENST00000338176 IBTKQ9P2D0 1353 aaPredicted RBP27.12■■□□□ 1.93
RAB28-203ENST00000338176 TCIRG1Q13488 830 aa27.12■■□□□ 1.93
RAB28-203ENST00000338176 HYPKQ9NX55 129 aa27.12■■□□□ 1.93
RAB28-203ENST00000338176 TCERG1O14776 1098 aaKnown RBP27.11■■□□□ 1.93
RAB28-203ENST00000338176 FER1L6Q2WGJ9 1857 aa27.11■■□□□ 1.93
RAB28-203ENST00000338176 PARP10Q53GL7 1025 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 162.5 ms