RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 CWC22Q9HCG8 908 aaKnown RBP12.21□□□□□ -0.46
HIF1A-202ENST00000337138 TBX22Q9Y458 520 aa12.21□□□□□ -0.46
HIF1A-202ENST00000337138 GADD45BO75293 160 aaPredicted RBP12.2□□□□□ -0.46
HIF1A-202ENST00000337138 CWC27Q6UX04 472 aaKnown RBP12.2□□□□□ -0.46
HIF1A-202ENST00000337138 TMEM87AQ8NBN3 555 aa12.2□□□□□ -0.46
HIF1A-202ENST00000337138 SPG7Q9UQ90 795 aa12.2□□□□□ -0.46
HIF1A-202ENST00000337138 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.2□□□□□ -0.46
HIF1A-202ENST00000337138 VPS37CA5D8V6 355 aaPredicted RBP12.2□□□□□ -0.46
HIF1A-202ENST00000337138 PIP4K2BP78356 416 aa12.2□□□□□ -0.46
HIF1A-202ENST00000337138 MAP7D2Q96T17 732 aa12.2□□□□□ -0.46
HIF1A-202ENST00000337138 HOXC9P31274 260 aa12.19□□□□□ -0.46
HIF1A-202ENST00000337138 COL9A3Q14050 684 aaPredicted RBP12.19□□□□□ -0.46
HIF1A-202ENST00000337138 USP25Q9UHP3 1055 aa12.19□□□□□ -0.46
HIF1A-202ENST00000337138 ECM29Q5VYK3 1845 aa12.19□□□□□ -0.46
HIF1A-202ENST00000337138 JARID2Q92833 1246 aaPredicted RBP12.19□□□□□ -0.46
HIF1A-202ENST00000337138 MAP3K5Q99683 1374 aa12.19□□□□□ -0.46
HIF1A-202ENST00000337138 UBTFL1P0CB47 393 aaPredicted RBP12.19□□□□□ -0.46
HIF1A-202ENST00000337138 TMEM94Q12767 1356 aa12.19□□□□□ -0.46
HIF1A-202ENST00000337138 NLRP6P59044 892 aa12.18□□□□□ -0.46
HIF1A-202ENST00000337138 CBX1P83916 185 aa12.18□□□□□ -0.46
HIF1A-202ENST00000337138 HS1BP3Q53T59 392 aa12.18□□□□□ -0.46
HIF1A-202ENST00000337138 SPC24Q8NBT2 197 aa12.18□□□□□ -0.46
HIF1A-202ENST00000337138 TSPY26PQ9H489 355 aa12.18□□□□□ -0.46
HIF1A-202ENST00000337138 KIF1AQ12756 1690 aa12.18□□□□□ -0.46
HIF1A-202ENST00000337138 SETD1BQ9UPS6 1966 aaKnown RBP12.18□□□□□ -0.46
HIF1A-202ENST00000337138 ANAPC15P60006 121 aa12.18□□□□□ -0.46
HIF1A-202ENST00000337138 ZNF771Q7L3S4 317 aaPredicted RBP12.18□□□□□ -0.46
HIF1A-202ENST00000337138 INTS4Q96HW7 963 aaKnown RBP12.18□□□□□ -0.46
HIF1A-202ENST00000337138 FUCA2Q9BTY2 467 aa12.18□□□□□ -0.46
HIF1A-202ENST00000337138 NPHP4O75161 1426 aaPredicted RBP12.18□□□□□ -0.46
HIF1A-202ENST00000337138 ZNF500O60304 480 aaPredicted RBP12.18□□□□□ -0.46
HIF1A-202ENST00000337138 HSPA4P34932 840 aa12.18□□□□□ -0.46
HIF1A-202ENST00000337138 CCT4P50991 539 aaKnown RBP12.18□□□□□ -0.46
HIF1A-202ENST00000337138 FLIIQ13045 1269 aa12.18□□□□□ -0.46
HIF1A-202ENST00000337138 NHSL1Q5SYE7 1610 aa12.18□□□□□ -0.46
HIF1A-202ENST00000337138 ADGRL3Q9HAR2 1447 aa12.18□□□□□ -0.46
HIF1A-202ENST00000337138 DRC7Q8IY82 874 aa12.18□□□□□ -0.46
HIF1A-202ENST00000337138 UTYO14607 1347 aa12.17□□□□□ -0.46
HIF1A-202ENST00000337138 MTX1Q13505 466 aa12.17□□□□□ -0.46
HIF1A-202ENST00000337138 FERMT3Q86UX7 667 aa12.17□□□□□ -0.46
HIF1A-202ENST00000337138 SRGAP3O43295 1099 aa12.17□□□□□ -0.46
HIF1A-202ENST00000337138 FOSBP53539 338 aa12.17□□□□□ -0.46
HIF1A-202ENST00000337138 CSPP1Q1MSJ5 1256 aa12.17□□□□□ -0.46
HIF1A-202ENST00000337138 LRSAM1Q6UWE0 723 aa12.17□□□□□ -0.46
HIF1A-202ENST00000337138 SYAP1Q96A49 352 aaPredicted RBP12.17□□□□□ -0.46
HIF1A-202ENST00000337138 KAZALD1Q96I82 304 aa12.17□□□□□ -0.46
HIF1A-202ENST00000337138 LSG1Q9H089 658 aaKnown RBP12.17□□□□□ -0.46
HIF1A-202ENST00000337138 TTC12Q9H892 705 aaPredicted RBP12.17□□□□□ -0.46
HIF1A-202ENST00000337138 CNPY2Q9Y2B0 182 aa12.17□□□□□ -0.46
HIF1A-202ENST00000337138 HDGFL1Q5TGJ6 251 aa12.16□□□□□ -0.46
HIF1A-202ENST00000337138 LRP10Q7Z4F1 713 aa12.16□□□□□ -0.46
HIF1A-202ENST00000337138 USP48Q86UV5 1035 aa12.16□□□□□ -0.46
HIF1A-202ENST00000337138 HCLS1P14317 486 aaPredicted RBP12.16□□□□□ -0.46
HIF1A-202ENST00000337138 TCEANC2Q96MN5 208 aa12.16□□□□□ -0.46
HIF1A-202ENST00000337138 PHAXQ9H814 394 aaKnown RBP12.16□□□□□ -0.46
HIF1A-202ENST00000337138 NOL7Q9UMY1 257 aaKnown RBP12.16□□□□□ -0.46
HIF1A-202ENST00000337138 OFD1O75665 1012 aa12.16□□□□□ -0.46
HIF1A-202ENST00000337138 NAP1L2Q9ULW6 460 aaPredicted RBP12.16□□□□□ -0.46
HIF1A-202ENST00000337138 BEND3Q5T5X7 828 aa12.15□□□□□ -0.46
HIF1A-202ENST00000337138 SMC3Q9UQE7 1217 aa12.15□□□□□ -0.46
HIF1A-202ENST00000337138 CCDC83Q8IWF9 413 aa12.15□□□□□ -0.47
HIF1A-202ENST00000337138 CCDC39Q9UFE4 941 aa12.15□□□□□ -0.47
HIF1A-202ENST00000337138 ABCA3Q99758 1704 aa12.14□□□□□ -0.47
HIF1A-202ENST00000337138 MBD3O95983 291 aa12.14□□□□□ -0.47
HIF1A-202ENST00000337138 GNAI3P08754 354 aa12.14□□□□□ -0.47
HIF1A-202ENST00000337138 CEBPAP49715 358 aaPredicted RBP12.14□□□□□ -0.47
HIF1A-202ENST00000337138 AIMP1Q12904 312 aaKnown RBP12.14□□□□□ -0.47
HIF1A-202ENST00000337138 DIAPH3Q9NSV4 1193 aa12.14□□□□□ -0.47
HIF1A-202ENST00000337138 IGSF3O75054 1194 aa12.14□□□□□ -0.47
HIF1A-202ENST00000337138 PPFIA3O75145 1194 aa12.14□□□□□ -0.47
HIF1A-202ENST00000337138 TERF1P54274 439 aa12.14□□□□□ -0.47
HIF1A-202ENST00000337138 CCDC30Q5VVM6 783 aa12.14□□□□□ -0.47
HIF1A-202ENST00000337138 GIMAP6Q6P9H5 292 aa12.14□□□□□ -0.47
HIF1A-202ENST00000337138 COL15A1P39059 1388 aa12.14□□□□□ -0.47
HIF1A-202ENST00000337138 CAMK4Q16566 473 aa12.14□□□□□ -0.47
HIF1A-202ENST00000337138 AMOTL2Q9Y2J4 779 aa12.14□□□□□ -0.47
HIF1A-202ENST00000337138 STK3Q13188 491 aa12.13□□□□□ -0.47
HIF1A-202ENST00000337138 PPP1R42Q7Z4L9 355 aa12.13□□□□□ -0.47
HIF1A-202ENST00000337138 FBXW7Q969H0 707 aa12.13□□□□□ -0.47
HIF1A-202ENST00000337138 CASTP20810 708 aaKnown RBP12.13□□□□□ -0.47
HIF1A-202ENST00000337138 NECAB1Q8N987 351 aa12.13□□□□□ -0.47
HIF1A-202ENST00000337138 SIL1Q9H173 461 aa12.13□□□□□ -0.47
HIF1A-202ENST00000337138 TOGARAM1Q9Y4F4 1720 aa12.13□□□□□ -0.47
HIF1A-202ENST00000337138 COL22A1Q8NFW1 1626 aaPredicted RBP12.13□□□□□ -0.47
HIF1A-202ENST00000337138 GOLGA6L4A6NEF3 574 aa12.13□□□□□ -0.47
HIF1A-202ENST00000337138 EIF4A1P60842 406 aaKnown RBP12.13□□□□□ -0.47
HIF1A-202ENST00000337138 ZKSCAN5Q9Y2L8 839 aa12.13□□□□□ -0.47
HIF1A-202ENST00000337138 SPEF2Q9C093 1822 aa12.13□□□□□ -0.47
HIF1A-202ENST00000337138 C4AP0C0L4 1744 aa12.13□□□□□ -0.47
HIF1A-202ENST00000337138 C4BP0C0L5 1744 aa12.13□□□□□ -0.47
HIF1A-202ENST00000337138 FAM173BQ6P4H8 233 aa12.12□□□□□ -0.47
HIF1A-202ENST00000337138 RAD50Q92878 1312 aa12.12□□□□□ -0.47
HIF1A-202ENST00000337138 TAF7Q15545 349 aaPredicted RBP12.12□□□□□ -0.47
HIF1A-202ENST00000337138 PDIA6Q15084 440 aa12.12□□□□□ -0.47
HIF1A-202ENST00000337138 RASEFQ8IZ41 740 aa12.12□□□□□ -0.47
HIF1A-202ENST00000337138 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.12□□□□□ -0.47
HIF1A-202ENST00000337138 SGSM2O43147 1006 aa12.11□□□□□ -0.47
HIF1A-202ENST00000337138 PRPF40BQ6NWY9 871 aaKnown RBP12.11□□□□□ -0.47
HIF1A-202ENST00000337138 JAKMIP1Q96N16 626 aaKnown RBP12.11□□□□□ -0.47
HIF1A-202ENST00000337138 MTERF4Q7Z6M4 381 aaKnown RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms