RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 TRPM3Q9HCF6 1732 aaPredicted RBP28.25■■■□□ 2.11
NDEL1-201ENST00000334527 KRT28Q7Z3Y7 464 aa28.25■■■□□ 2.11
NDEL1-201ENST00000334527 RASEFQ8IZ41 740 aa28.25■■■□□ 2.11
NDEL1-201ENST00000334527 ECHDC1Q9NTX5 307 aa28.25■■■□□ 2.11
NDEL1-201ENST00000334527 GPATCH3Q96I76 525 aa28.24■■■□□ 2.11
NDEL1-201ENST00000334527 IFIT2P09913 472 aaKnown RBP28.24■■■□□ 2.11
NDEL1-201ENST00000334527 TTC14Q96N46 770 aa28.24■■■□□ 2.11
NDEL1-201ENST00000334527 LINS1Q8NG48 757 aa28.23■■■□□ 2.11
NDEL1-201ENST00000334527 RUFY2Q8WXA3 655 aa28.23■■■□□ 2.11
NDEL1-201ENST00000334527 WDR33Q9C0J8 1336 aaKnown RBP28.23■■■□□ 2.11
NDEL1-201ENST00000334527 RGPD5Q99666 1765 aa28.22■■■□□ 2.11
NDEL1-201ENST00000334527 SYCE3A1L190 88 aa28.22■■■□□ 2.11
NDEL1-201ENST00000334527 AIMP1Q12904 312 aaKnown RBP28.22■■■□□ 2.11
NDEL1-201ENST00000334527 DDX21Q9NR30 783 aaKnown RBP eCLIP28.22■■■□□ 2.11
NDEL1-201ENST00000334527 GRM8O00222 908 aa28.22■■■□□ 2.11
NDEL1-201ENST00000334527 DDX58O95786 925 aaKnown RBP28.22■■■□□ 2.11
NDEL1-201ENST00000334527 LRSAM1Q6UWE0 723 aa28.22■■■□□ 2.11
NDEL1-201ENST00000334527 AK2P54819 239 aa28.21■■■□□ 2.11
NDEL1-201ENST00000334527 SUCLG2Q96I99 432 aa28.21■■■□□ 2.11
NDEL1-201ENST00000334527 FOXD4L6Q3SYB3 417 aaPredicted RBP28.21■■■□□ 2.11
NDEL1-201ENST00000334527 FOXD4L3Q6VB84 417 aaPredicted RBP28.21■■■□□ 2.11
NDEL1-201ENST00000334527 ADAMTS7Q9UKP4 1686 aa28.2■■■□□ 2.11
NDEL1-201ENST00000334527 AACSQ86V21 672 aa28.2■■■□□ 2.1
NDEL1-201ENST00000334527 ERBB3P21860 1342 aa28.2■■■□□ 2.1
NDEL1-201ENST00000334527 KAZALD1Q96I82 304 aa28.19■■■□□ 2.1
NDEL1-201ENST00000334527 NAP1L5Q96NT1 182 aaPredicted RBP28.19■■■□□ 2.1
NDEL1-201ENST00000334527 BICC1Q9H694 974 aaKnown RBP28.19■■■□□ 2.1
NDEL1-201ENST00000334527 LIMCH1Q9UPQ0 1083 aa28.19■■■□□ 2.1
NDEL1-201ENST00000334527 UTYO14607 1347 aa28.18■■■□□ 2.1
NDEL1-201ENST00000334527 ZC3H6P61129 1189 aaKnown RBP28.18■■■□□ 2.1
NDEL1-201ENST00000334527 RUFY3Q7L099 469 aa28.18■■■□□ 2.1
NDEL1-201ENST00000334527 LMTK3Q96Q04 1460 aa28.18■■■□□ 2.1
NDEL1-201ENST00000334527 RPAP1Q9BWH6 1393 aaPredicted RBP28.18■■■□□ 2.1
NDEL1-201ENST00000334527 PDIA6Q15084 440 aa28.18■■■□□ 2.1
NDEL1-201ENST00000334527 LARP6Q9BRS8 491 aaKnown RBP28.18■■■□□ 2.1
NDEL1-201ENST00000334527 CASTP20810 708 aaKnown RBP28.17■■■□□ 2.1
NDEL1-201ENST00000334527 PTH1RQ03431 593 aa28.17■■■□□ 2.1
NDEL1-201ENST00000334527 PROSER2Q86WR7 435 aaPredicted RBP28.17■■■□□ 2.1
NDEL1-201ENST00000334527 EVI5LQ96CN4 794 aa28.17■■■□□ 2.1
NDEL1-201ENST00000334527 SLC39A6Q13433 755 aa28.16■■■□□ 2.1
NDEL1-201ENST00000334527 CPA1P15085 419 aa28.16■■■□□ 2.1
NDEL1-201ENST00000334527 ZNF790Q6PG37 636 aa28.16■■■□□ 2.1
NDEL1-201ENST00000334527 RAPGEF4Q8WZA2 1011 aa28.16■■■□□ 2.1
NDEL1-201ENST00000334527 GDPD2Q9HCC8 539 aa28.16■■■□□ 2.1
NDEL1-201ENST00000334527 ADAMTSL3P82987 1691 aa28.16■■■□□ 2.1
NDEL1-201ENST00000334527 KIF1AQ12756 1690 aa28.16■■■□□ 2.1
NDEL1-201ENST00000334527 C1orf167Q5SNV9 1468 aa28.15■■■□□ 2.1
NDEL1-201ENST00000334527 SASH1O94885 1247 aa28.15■■■□□ 2.1
NDEL1-201ENST00000334527 G3BP1Q13283 466 aaKnown RBP eCLIP28.15■■■□□ 2.1
NDEL1-201ENST00000334527 RIC3Q7Z5B4 369 aa28.15■■■□□ 2.1
NDEL1-201ENST00000334527 PRPF40BQ6NWY9 871 aaKnown RBP28.14■■■□□ 2.1
NDEL1-201ENST00000334527 ZSCAN30Q86W11 494 aa28.14■■■□□ 2.1
NDEL1-201ENST00000334527 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.14■■■□□ 2.1
NDEL1-201ENST00000334527 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP28.14■■■□□ 2.1
NDEL1-201ENST00000334527 IGKV5-2P06315 115 aa28.14■■■□□ 2.09
NDEL1-201ENST00000334527 C5P01031 1676 aa28.13■■■□□ 2.09
NDEL1-201ENST00000334527 USP48Q86UV5 1035 aa28.13■■■□□ 2.09
NDEL1-201ENST00000334527 EAF2Q96CJ1 260 aaPredicted RBP28.13■■■□□ 2.09
NDEL1-201ENST00000334527 SLC52A2Q9HAB3 445 aa28.13■■■□□ 2.09
NDEL1-201ENST00000334527 NLRP2Q9NX02 1062 aa28.13■■■□□ 2.09
NDEL1-201ENST00000334527 GADD45BO75293 160 aaPredicted RBP28.13■■■□□ 2.09
NDEL1-201ENST00000334527 MYL6BP14649 208 aa28.13■■■□□ 2.09
NDEL1-201ENST00000334527 SYAP1Q96A49 352 aaPredicted RBP28.13■■■□□ 2.09
NDEL1-201ENST00000334527 JAKMIP1Q96N16 626 aaKnown RBP28.13■■■□□ 2.09
NDEL1-201ENST00000334527 NPHP3Q7Z494 1330 aa28.12■■■□□ 2.09
NDEL1-201ENST00000334527 LARP1Q6PKG0 1096 aaKnown RBP28.12■■■□□ 2.09
NDEL1-201ENST00000334527 CCDC8Q9H0W5 538 aaPredicted RBP28.12■■■□□ 2.09
NDEL1-201ENST00000334527 KDM6AO15550 1401 aaPredicted RBP28.12■■■□□ 2.09
NDEL1-201ENST00000334527 ADCK5Q3MIX3 580 aa28.11■■■□□ 2.09
NDEL1-201ENST00000334527 PDLIM2Q96JY6 352 aa28.11■■■□□ 2.09
NDEL1-201ENST00000334527 SCN11AQ9UI33 1791 aa28.11■■■□□ 2.09
NDEL1-201ENST00000334527 ZSCAN22P10073 491 aaPredicted RBP28.11■■■□□ 2.09
NDEL1-201ENST00000334527 SIL1Q9H173 461 aa28.11■■■□□ 2.09
NDEL1-201ENST00000334527 SMC3Q9UQE7 1217 aa28.11■■■□□ 2.09
NDEL1-201ENST00000334527 NEXNQ0ZGT2 675 aa28.1■■■□□ 2.09
NDEL1-201ENST00000334527 PDRG1Q9NUG6 133 aa28.1■■■□□ 2.09
NDEL1-201ENST00000334527 LARGE1O95461 756 aa28.1■■■□□ 2.09
NDEL1-201ENST00000334527 NFATC2IPQ8NCF5 419 aa28.1■■■□□ 2.09
NDEL1-201ENST00000334527 ALS2Q96Q42 1657 aa28.1■■■□□ 2.09
NDEL1-201ENST00000334527 CCDC171Q6TFL3 1326 aa28.1■■■□□ 2.09
NDEL1-201ENST00000334527 MST1RQ04912 1400 aa28.09■■■□□ 2.09
NDEL1-201ENST00000334527 STX6O43752 255 aa28.09■■■□□ 2.09
NDEL1-201ENST00000334527 SYT1P21579 422 aa28.09■■■□□ 2.09
NDEL1-201ENST00000334527 VPS53Q5VIR6 699 aa28.09■■■□□ 2.09
NDEL1-201ENST00000334527 KCNB2Q92953 911 aa28.09■■■□□ 2.09
NDEL1-201ENST00000334527 TLR7Q9NYK1 1049 aaKnown RBP28.09■■■□□ 2.09
NDEL1-201ENST00000334527 TCHHQ07283 1943 aa28.09■■■□□ 2.09
NDEL1-201ENST00000334527 NEURL1BA8MQ27 555 aa28.09■■■□□ 2.09
NDEL1-201ENST00000334527 PHKG2P15735 406 aa28.09■■■□□ 2.09
NDEL1-201ENST00000334527 TATP17735 454 aaPredicted RBP28.09■■■□□ 2.09
NDEL1-201ENST00000334527 XAGE3Q8WTP9 111 aa28.09■■■□□ 2.09
NDEL1-201ENST00000334527 FAM227BQ96M60 508 aa28.09■■■□□ 2.09
NDEL1-201ENST00000334527 TM6SF1Q9BZW5 370 aa28.09■■■□□ 2.09
NDEL1-201ENST00000334527 C19orf44Q9H6X5 657 aa28.09■■■□□ 2.09
NDEL1-201ENST00000334527 CYP46A1Q9Y6A2 500 aa28.09■■■□□ 2.09
NDEL1-201ENST00000334527 NECTIN1Q15223 517 aa28.08■■■□□ 2.09
NDEL1-201ENST00000334527 ZSWIM6Q9HCJ5 1215 aa28.08■■■□□ 2.09
NDEL1-201ENST00000334527 HIP1O00291 1037 aa28.08■■■□□ 2.09
NDEL1-201ENST00000334527 NMIQ13287 307 aaPredicted RBP28.07■■■□□ 2.08
NDEL1-201ENST00000334527 HS1BP3Q53T59 392 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms