RNA–Protein interactions for RNA: ENST00000325167.9

CHMP6-201, Transcript of charged multivesicular body protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP6, Length 1,664 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-201ENST00000325167 SDSP20132 328 aa23.73■■□□□ 1.39
CHMP6-201ENST00000325167 OTUD7AQ8TE49 926 aaPredicted RBP23.73■■□□□ 1.39
CHMP6-201ENST00000325167 EP400Q96L91 3159 aa23.73■■□□□ 1.39
CHMP6-201ENST00000325167 METTL22Q9BUU2 404 aaPredicted RBP23.73■■□□□ 1.39
CHMP6-201ENST00000325167 AIMP1Q12904 312 aaKnown RBP23.72■■□□□ 1.39
CHMP6-201ENST00000325167 ERC1Q8IUD2 1116 aa23.72■■□□□ 1.39
CHMP6-201ENST00000325167 XAGE3Q8WTP9 111 aa23.72■■□□□ 1.39
CHMP6-201ENST00000325167 CCDC9Q9Y3X0 531 aaKnown RBP23.72■■□□□ 1.39
CHMP6-201ENST00000325167 ANKRD13DQ6ZTN6 518 aa23.71■■□□□ 1.39
CHMP6-201ENST00000325167 COPS6Q7L5N1 327 aa23.71■■□□□ 1.39
CHMP6-201ENST00000325167 SNX21Q969T3 373 aa23.71■■□□□ 1.39
CHMP6-201ENST00000325167 PAPPAQ13219 1627 aa23.7■■□□□ 1.39
CHMP6-201ENST00000325167 MYL6BP14649 208 aa23.7■■□□□ 1.39
CHMP6-201ENST00000325167 TBC1D2Q9BYX2 928 aa23.7■■□□□ 1.39
CHMP6-201ENST00000325167 USP16Q9Y5T5 823 aa23.7■■□□□ 1.39
CHMP6-201ENST00000325167 UBR2Q8IWV8 1755 aa23.7■■□□□ 1.38
CHMP6-201ENST00000325167 REC8O95072 547 aa23.7■■□□□ 1.38
CHMP6-201ENST00000325167 VPS72Q15906 364 aa23.7■■□□□ 1.38
CHMP6-201ENST00000325167 LRP10Q7Z4F1 713 aa23.7■■□□□ 1.38
CHMP6-201ENST00000325167 HSCBQ8IWL3 235 aa23.7■■□□□ 1.38
CHMP6-201ENST00000325167 BTG4Q9NY30 223 aa23.7■■□□□ 1.38
CHMP6-201ENST00000325167 NRAPQ86VF7 1730 aa23.69■■□□□ 1.38
CHMP6-201ENST00000325167 SHANK3Q9BYB0 1731 aa23.69■■□□□ 1.38
CHMP6-201ENST00000325167 RHPN1Q8TCX5 695 aa23.69■■□□□ 1.38
CHMP6-201ENST00000325167 TNS2Q63HR2 1409 aa23.69■■□□□ 1.38
CHMP6-201ENST00000325167 CWF19L2Q2TBE0 894 aaKnown RBP23.68■■□□□ 1.38
CHMP6-201ENST00000325167 DDX54Q8TDD1 881 aaKnown RBP23.68■■□□□ 1.38
CHMP6-201ENST00000325167 COL15A1P39059 1388 aa23.67■■□□□ 1.38
CHMP6-201ENST00000325167 NEURL1BA8MQ27 555 aa23.67■■□□□ 1.38
CHMP6-201ENST00000325167 NBR1Q14596 966 aa23.67■■□□□ 1.38
CHMP6-201ENST00000325167 PLBD2Q8NHP8 589 aa23.67■■□□□ 1.38
CHMP6-201ENST00000325167 KCPQ6ZWJ8 1503 aa23.66■■□□□ 1.38
CHMP6-201ENST00000325167 IGKV5-2P06315 115 aa23.66■■□□□ 1.38
CHMP6-201ENST00000325167 GCKRQ14397 625 aa23.66■■□□□ 1.38
CHMP6-201ENST00000325167 TEX13AQ9BXU3 409 aaPredicted RBP23.66■■□□□ 1.38
CHMP6-201ENST00000325167 BCL11AQ9H165 835 aa23.66■■□□□ 1.38
CHMP6-201ENST00000325167 BRWD3Q6RI45 1802 aa23.65■■□□□ 1.38
CHMP6-201ENST00000325167 DISP2A7MBM2 1401 aa23.65■■□□□ 1.38
CHMP6-201ENST00000325167 ERC2O15083 957 aa23.65■■□□□ 1.38
CHMP6-201ENST00000325167 OS9Q13438 667 aaPredicted RBP23.65■■□□□ 1.38
CHMP6-201ENST00000325167 TMOD3Q9NYL9 352 aa23.65■■□□□ 1.38
CHMP6-201ENST00000325167 MYD88Q99836 296 aa23.64■■□□□ 1.38
CHMP6-201ENST00000325167 CDCA7Q9BWT1 371 aaPredicted RBP23.64■■□□□ 1.38
CHMP6-201ENST00000325167 SEPT12Q8IYM1 358 aa23.64■■□□□ 1.37
CHMP6-201ENST00000325167 TTC41PQ6P2S7 1318 aa23.63■■□□□ 1.37
CHMP6-201ENST00000325167 USP42Q9H9J4 1324 aaKnown RBP23.63■■□□□ 1.37
CHMP6-201ENST00000325167 VSIG10Q8N0Z9 540 aa23.63■■□□□ 1.37
CHMP6-201ENST00000325167 CLASRPQ8N2M8 674 aaKnown RBP23.63■■□□□ 1.37
CHMP6-201ENST00000325167 GPATCH3Q96I76 525 aa23.63■■□□□ 1.37
CHMP6-201ENST00000325167 SUCLG2Q96I99 432 aa23.63■■□□□ 1.37
CHMP6-201ENST00000325167 EPB41L2O43491 1005 aaKnown RBP23.62■■□□□ 1.37
CHMP6-201ENST00000325167 USP26Q9BXU7 913 aa23.61■■□□□ 1.37
CHMP6-201ENST00000325167 A0A0G2JS52 829 aa23.6■■□□□ 1.37
CHMP6-201ENST00000325167 RABEP1Q15276 862 aa23.6■■□□□ 1.37
CHMP6-201ENST00000325167 IL1RAPL2Q9NP60 686 aa23.6■■□□□ 1.37
CHMP6-201ENST00000325167 G3BP1Q13283 466 aaKnown RBP eCLIP23.6■■□□□ 1.37
CHMP6-201ENST00000325167 BICC1Q9H694 974 aaKnown RBP23.6■■□□□ 1.37
CHMP6-201ENST00000325167 TUBGCP6Q96RT7 1819 aa23.6■■□□□ 1.37
CHMP6-201ENST00000325167 FAM98CQ17RN3 349 aaKnown RBP23.59■■□□□ 1.37
CHMP6-201ENST00000325167 IL27Q8NEV9 243 aa23.59■■□□□ 1.37
CHMP6-201ENST00000325167 THRAP3Q9Y2W1 955 aaKnown RBP23.59■■□□□ 1.37
CHMP6-201ENST00000325167 ARFGEF2Q9Y6D5 1785 aa23.59■■□□□ 1.37
CHMP6-201ENST00000325167 TRIM6-TRIM34B2RNG4 842 aa23.58■■□□□ 1.37
CHMP6-201ENST00000325167 KIF2CQ99661 725 aa23.58■■□□□ 1.37
CHMP6-201ENST00000325167 GLRX3O76003 335 aaKnown RBP23.57■■□□□ 1.36
CHMP6-201ENST00000325167 KAZALD1Q96I82 304 aa23.57■■□□□ 1.36
CHMP6-201ENST00000325167 TOGARAM1Q9Y4F4 1720 aa23.57■■□□□ 1.36
CHMP6-201ENST00000325167 NBPF26B4DH59 902 aa23.57■■□□□ 1.36
CHMP6-201ENST00000325167 EXOC5O00471 708 aa23.57■■□□□ 1.36
CHMP6-201ENST00000325167 ONECUT3O60422 494 aaPredicted RBP23.57■■□□□ 1.36
CHMP6-201ENST00000325167 NBPF14Q5TI25 921 aa23.57■■□□□ 1.36
CHMP6-201ENST00000325167 NBPF10Q6P3W6 841 aaKnown RBP23.57■■□□□ 1.36
CHMP6-201ENST00000325167 NBPF15Q8N660 670 aa23.57■■□□□ 1.36
CHMP6-201ENST00000325167 ANTXR1Q9H6X2 564 aa23.57■■□□□ 1.36
CHMP6-201ENST00000325167 MCCP23508 829 aa23.56■■□□□ 1.36
CHMP6-201ENST00000325167 NFKBIBQ15653 356 aa23.56■■□□□ 1.36
CHMP6-201ENST00000325167 NUTM1Q86Y26 1132 aa23.56■■□□□ 1.36
CHMP6-201ENST00000325167 CNTROBQ8N137 903 aa23.56■■□□□ 1.36
CHMP6-201ENST00000325167 RILPL2Q969X0 211 aa23.56■■□□□ 1.36
CHMP6-201ENST00000325167 PI4K2BQ8TCG2 481 aa23.55■■□□□ 1.36
CHMP6-201ENST00000325167 ESYT1Q9BSJ8 1104 aa23.55■■□□□ 1.36
CHMP6-201ENST00000325167 SPATA31A5Q5VU36 1347 aa23.55■■□□□ 1.36
CHMP6-201ENST00000325167 SPATA31A7Q8IWB4 1347 aa23.55■■□□□ 1.36
CHMP6-201ENST00000325167 PTCD1O75127 700 aaKnown RBP23.54■■□□□ 1.36
CHMP6-201ENST00000325167 IFIT2P09913 472 aaKnown RBP23.54■■□□□ 1.36
CHMP6-201ENST00000325167 CHMLP26374 656 aa23.54■■□□□ 1.36
CHMP6-201ENST00000325167 RABL6Q3YEC7 729 aaPredicted RBP23.54■■□□□ 1.36
CHMP6-201ENST00000325167 STARD3NLO95772 234 aa23.54■■□□□ 1.36
CHMP6-201ENST00000325167 A0A087WZG4 1122 aa23.53■■□□□ 1.36
CHMP6-201ENST00000325167 KRT27Q7Z3Y8 459 aa23.53■■□□□ 1.36
CHMP6-201ENST00000325167 CCDC191Q8NCU4 936 aa23.53■■□□□ 1.36
CHMP6-201ENST00000325167 SLKQ9H2G2 1235 aaPredicted RBP23.53■■□□□ 1.36
CHMP6-201ENST00000325167 COPRSQ9NQ92 184 aa23.53■■□□□ 1.36
CHMP6-201ENST00000325167 ECHDC1Q9NTX5 307 aa23.53■■□□□ 1.36
CHMP6-201ENST00000325167 CWC25Q9NXE8 425 aaPredicted RBP23.53■■□□□ 1.36
CHMP6-201ENST00000325167 CHMP5Q9NZZ3 219 aa23.53■■□□□ 1.36
CHMP6-201ENST00000325167 AFDNP55196 1824 aaKnown RBP23.53■■□□□ 1.36
CHMP6-201ENST00000325167 WNK3Q9BYP7 1800 aa23.53■■□□□ 1.36
CHMP6-201ENST00000325167 TSHZ3Q63HK5 1081 aa23.52■■□□□ 1.36
CHMP6-201ENST00000325167 PIGBQ92521 554 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms