RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 SLC26A8Q96RN1 970 aa21.29■■□□□ 1
PRKCB-202ENST00000321728 C3P01024 1663 aa21.28■■□□□ 1
PRKCB-202ENST00000321728 KRT85P78386 507 aa21.28■■□□□ 1
PRKCB-202ENST00000321728 NECAB1Q8N987 351 aa21.28■■□□□ 1
PRKCB-202ENST00000321728 ESF1Q9H501 851 aaKnown RBP21.28■■□□□ 1
PRKCB-202ENST00000321728 LIG1P18858 919 aa21.28■■□□□ 1
PRKCB-202ENST00000321728 ADCK5Q3MIX3 580 aa21.28■■□□□ 1
PRKCB-202ENST00000321728 PRPF40BQ6NWY9 871 aaKnown RBP21.28■■□□□ 1
PRKCB-202ENST00000321728 TTC6Q86TZ1 520 aa21.28■■□□□ 1
PRKCB-202ENST00000321728 LTV1Q96GA3 475 aaPredicted RBP21.28■■□□□ 1
PRKCB-202ENST00000321728 TRIM5Q9C035 493 aa21.28■■□□□ 1
PRKCB-202ENST00000321728 CYP46A1Q9Y6A2 500 aa21.28■■□□□ 1
PRKCB-202ENST00000321728 SRGAP3O43295 1099 aa21.27■■□□□ 1
PRKCB-202ENST00000321728 VPS53Q5VIR6 699 aa21.27■■□□□ 1
PRKCB-202ENST00000321728 LARP1BQ659C4 914 aaKnown RBP21.27■■□□□ 1
PRKCB-202ENST00000321728 ZSCAN31Q96LW9 406 aaPredicted RBP21.27■■□□□ 1
PRKCB-202ENST00000321728 SH2B1Q9NRF2 756 aaPredicted RBP21.27■■□□□ 1
PRKCB-202ENST00000321728 OGFRQ9NZT2 677 aa21.27■■□□□ 1
PRKCB-202ENST00000321728 NRBP1Q9UHY1 535 aa21.27■■□□□ 1
PRKCB-202ENST00000321728 NRXN3Q9Y4C0 1643 aa21.27■■□□□ 1
PRKCB-202ENST00000321728 ZNF771Q7L3S4 317 aaPredicted RBP21.27■■□□□ 1
PRKCB-202ENST00000321728 KIF1BPQ96EK5 621 aa21.27■■□□□ 1
PRKCB-202ENST00000321728 TNMDQ9H2S6 317 aa21.27■■□□□ 1
PRKCB-202ENST00000321728 GOLGA6L4A6NEF3 574 aa21.26■□□□□ 0.99
PRKCB-202ENST00000321728 SMTNL1A8MU46 457 aa21.26■□□□□ 0.99
PRKCB-202ENST00000321728 TNNT1P13805 278 aa21.26■□□□□ 0.99
PRKCB-202ENST00000321728 ANO6Q4KMQ2 910 aa21.26■□□□□ 0.99
PRKCB-202ENST00000321728 FAM173BQ6P4H8 233 aa21.26■□□□□ 0.99
PRKCB-202ENST00000321728 CBX8Q9HC52 389 aa21.26■□□□□ 0.99
PRKCB-202ENST00000321728 PTH1RQ03431 593 aa21.25■□□□□ 0.99
PRKCB-202ENST00000321728 ME3Q16798 604 aa21.25■□□□□ 0.99
PRKCB-202ENST00000321728 DACT1Q9NYF0 836 aa21.25■□□□□ 0.99
PRKCB-202ENST00000321728 ITSN1Q15811 1721 aa21.25■□□□□ 0.99
PRKCB-202ENST00000321728 ZSCAN25Q6NSZ9 544 aa21.24■□□□□ 0.99
PRKCB-202ENST00000321728 RUFY2Q8WXA3 655 aa21.24■□□□□ 0.99
PRKCB-202ENST00000321728 BCL11BQ9C0K0 894 aaPredicted RBP21.24■□□□□ 0.99
PRKCB-202ENST00000321728 ST3GAL1Q11201 340 aa21.23■□□□□ 0.99
PRKCB-202ENST00000321728 CDC37L1Q7L3B6 337 aa21.23■□□□□ 0.99
PRKCB-202ENST00000321728 CCDC112Q8NEF3 446 aa21.23■□□□□ 0.99
PRKCB-202ENST00000321728 XRN1Q8IZH2 1706 aaKnown RBP21.23■□□□□ 0.99
PRKCB-202ENST00000321728 PEAK1Q9H792 1746 aa21.23■□□□□ 0.99
PRKCB-202ENST00000321728 OS9Q13438 667 aaPredicted RBP21.23■□□□□ 0.99
PRKCB-202ENST00000321728 NAA30Q147X3 362 aaPredicted RBP21.23■□□□□ 0.99
PRKCB-202ENST00000321728 TPD52L1Q16890 204 aaPredicted RBP21.23■□□□□ 0.99
PRKCB-202ENST00000321728 ZSWIM6Q9HCJ5 1215 aa21.23■□□□□ 0.99
PRKCB-202ENST00000321728 CTNNA3Q9UI47 895 aa21.23■□□□□ 0.99
PRKCB-202ENST00000321728 ZNF75DP51815 510 aa21.22■□□□□ 0.99
PRKCB-202ENST00000321728 POLA2Q14181 598 aa21.22■□□□□ 0.99
PRKCB-202ENST00000321728 AKAP12Q02952 1782 aa21.22■□□□□ 0.99
PRKCB-202ENST00000321728 ZNF592Q92610 1267 aa21.22■□□□□ 0.99
PRKCB-202ENST00000321728 KCNJ4P48050 445 aa21.22■□□□□ 0.99
PRKCB-202ENST00000321728 SYCP1Q15431 976 aa21.22■□□□□ 0.99
PRKCB-202ENST00000321728 PHAXQ9H814 394 aaKnown RBP21.22■□□□□ 0.99
PRKCB-202ENST00000321728 CGNQ9P2M7 1197 aaKnown RBP21.22■□□□□ 0.99
PRKCB-202ENST00000321728 ZKSCAN1P17029 563 aaPredicted RBP21.21■□□□□ 0.99
PRKCB-202ENST00000321728 AMPHP49418 695 aa21.21■□□□□ 0.99
PRKCB-202ENST00000321728 USHBP1Q8N6Y0 703 aa21.21■□□□□ 0.99
PRKCB-202ENST00000321728 TFIP11Q9UBB9 837 aaKnown RBP21.21■□□□□ 0.99
PRKCB-202ENST00000321728 PAXBP1Q9Y5B6 917 aa21.21■□□□□ 0.99
PRKCB-202ENST00000321728 GLRX3O76003 335 aaKnown RBP21.21■□□□□ 0.99
PRKCB-202ENST00000321728 TPCN1Q9ULQ1 816 aa21.21■□□□□ 0.99
PRKCB-202ENST00000321728 SPATA32Q96LK8 384 aa21.2■□□□□ 0.98
PRKCB-202ENST00000321728 EYA1Q99502 592 aa21.2■□□□□ 0.98
PRKCB-202ENST00000321728 TM6SF1Q9BZW5 370 aa21.2■□□□□ 0.98
PRKCB-202ENST00000321728 CLIP2Q9UDT6 1046 aa21.2■□□□□ 0.98
PRKCB-202ENST00000321728 ELP1O95163 1332 aa21.2■□□□□ 0.98
PRKCB-202ENST00000321728 PLA2G4DQ86XP0 818 aa21.2■□□□□ 0.98
PRKCB-202ENST00000321728 OVOS2A0A0J9YW53 1432 aa21.2■□□□□ 0.98
PRKCB-202ENST00000321728 OVOS2Q6IE36 1432 aa21.2■□□□□ 0.98
PRKCB-202ENST00000321728 RGPD1P0DJD0 1748 aa21.19■□□□□ 0.98
PRKCB-202ENST00000321728 NBPF7P0C2Y1 421 aaPredicted RBP21.19■□□□□ 0.98
PRKCB-202ENST00000321728 HDGFL1Q5TGJ6 251 aa21.19■□□□□ 0.98
PRKCB-202ENST00000321728 PDCP20941 246 aa21.19■□□□□ 0.98
PRKCB-202ENST00000321728 ZNF165P49910 485 aa21.19■□□□□ 0.98
PRKCB-202ENST00000321728 CACTINQ8WUQ7 758 aaKnown RBP21.18■□□□□ 0.98
PRKCB-202ENST00000321728 SCAND2PQ9GZW5 306 aaPredicted RBP21.18■□□□□ 0.98
PRKCB-202ENST00000321728 DNAJC25Q9H1X3 360 aa21.18■□□□□ 0.98
PRKCB-202ENST00000321728 DDX19AQ9NUU7 478 aaKnown RBP21.18■□□□□ 0.98
PRKCB-202ENST00000321728 FAM208AQ9UK61 1670 aaKnown RBP21.18■□□□□ 0.98
PRKCB-202ENST00000321728 MAP3K5Q99683 1374 aa21.18■□□□□ 0.98
PRKCB-202ENST00000321728 GNAT3A8MTJ3 354 aa21.18■□□□□ 0.98
PRKCB-202ENST00000321728 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.18■□□□□ 0.98
PRKCB-202ENST00000321728 PPP6R1Q9UPN7 881 aa21.18■□□□□ 0.98
PRKCB-202ENST00000321728 NGDNQ8NEJ9 315 aaKnown RBP21.17■□□□□ 0.98
PRKCB-202ENST00000321728 DDX41Q9UJV9 622 aaKnown RBP21.17■□□□□ 0.98
PRKCB-202ENST00000321728 SPATA31D1Q6ZQQ2 1576 aa21.17■□□□□ 0.98
PRKCB-202ENST00000321728 LTKP29376 864 aa21.17■□□□□ 0.98
PRKCB-202ENST00000321728 HSP90AB4PQ58FF6 505 aa21.17■□□□□ 0.98
PRKCB-202ENST00000321728 TDRD7Q8NHU6 1098 aaKnown RBP21.17■□□□□ 0.98
PRKCB-202ENST00000321728 BICD2Q8TD16 824 aa21.17■□□□□ 0.98
PRKCB-202ENST00000321728 TTC41PQ6P2S7 1318 aa21.17■□□□□ 0.98
PRKCB-202ENST00000321728 CEBPAP49715 358 aaPredicted RBP21.16■□□□□ 0.98
PRKCB-202ENST00000321728 CEP135Q66GS9 1140 aa21.16■□□□□ 0.98
PRKCB-202ENST00000321728 CLSTN2Q9H4D0 955 aa21.16■□□□□ 0.98
PRKCB-202ENST00000321728 NPHP3Q7Z494 1330 aa21.16■□□□□ 0.98
PRKCB-202ENST00000321728 TTC21AQ8NDW8 1320 aa21.16■□□□□ 0.98
PRKCB-202ENST00000321728 GABPB1Q06547 395 aaPredicted RBP21.16■□□□□ 0.98
PRKCB-202ENST00000321728 CLASRPQ8N2M8 674 aaKnown RBP21.16■□□□□ 0.98
PRKCB-202ENST00000321728 TCEANC2Q96MN5 208 aa21.16■□□□□ 0.98
PRKCB-202ENST00000321728 RBM8AQ9Y5S9 174 aaKnown RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms