RNA–Protein interactions for RNA: ENST00000318974.13

PTPN6-201, Transcript of protein tyrosine phosphatase, non-receptor type 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTPN6, Length 2,245 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6-201ENST00000318974 METTL22Q9BUU2 404 aaPredicted RBP15.75■□□□□ 0.11
PTPN6-201ENST00000318974 UPF2Q9HAU5 1272 aaKnown RBP15.75■□□□□ 0.11
PTPN6-201ENST00000318974 PALLDQ8WX93 1383 aa15.74■□□□□ 0.11
PTPN6-201ENST00000318974 UBTFL1P0CB47 393 aaPredicted RBP15.74■□□□□ 0.11
PTPN6-201ENST00000318974 CYP19A1P11511 503 aaPredicted RBP15.74■□□□□ 0.11
PTPN6-201ENST00000318974 PLBD2Q8NHP8 589 aa15.74■□□□□ 0.11
PTPN6-201ENST00000318974 LOC102724428A0A0B4J2F2 783 aa15.73■□□□□ 0.11
PTPN6-201ENST00000318974 SEC24BO95487 1268 aa15.73■□□□□ 0.11
PTPN6-201ENST00000318974 DEKP35659 375 aaKnown RBP15.73■□□□□ 0.11
PTPN6-201ENST00000318974 SIK1P57059 783 aa15.73■□□□□ 0.11
PTPN6-201ENST00000318974 FBXO41Q8TF61 875 aa15.73■□□□□ 0.11
PTPN6-201ENST00000318974 ATP6V1AP38606 617 aa15.72■□□□□ 0.11
PTPN6-201ENST00000318974 CWF19L2Q2TBE0 894 aaKnown RBP15.72■□□□□ 0.11
PTPN6-201ENST00000318974 FAM182BQ5T319 152 aa15.72■□□□□ 0.11
PTPN6-201ENST00000318974 TTLL7Q6ZT98 887 aa15.72■□□□□ 0.11
PTPN6-201ENST00000318974 GCC1Q96CN9 775 aa15.72■□□□□ 0.11
PTPN6-201ENST00000318974 MYD88Q99836 296 aa15.72■□□□□ 0.11
PTPN6-201ENST00000318974 IGKV5-2P06315 115 aa15.71■□□□□ 0.11
PTPN6-201ENST00000318974 SLC4A3P48751 1232 aa15.71■□□□□ 0.11
PTPN6-201ENST00000318974 C9orf78Q9NZ63 289 aaPredicted RBP15.71■□□□□ 0.11
PTPN6-201ENST00000318974 LRRFIP2Q9Y608 721 aaKnown RBP15.71■□□□□ 0.11
PTPN6-201ENST00000318974 IBTKQ9P2D0 1353 aaPredicted RBP15.71■□□□□ 0.11
PTPN6-201ENST00000318974 HMMRO75330 724 aa15.71■□□□□ 0.1
PTPN6-201ENST00000318974 NBPF7P0C2Y1 421 aaPredicted RBP15.71■□□□□ 0.1
PTPN6-201ENST00000318974 RBM6P78332 1123 aaKnown RBP15.71■□□□□ 0.1
PTPN6-201ENST00000318974 NEURL1BA8MQ27 555 aa15.7■□□□□ 0.1
PTPN6-201ENST00000318974 HDAC5Q9UQL6 1122 aa15.7■□□□□ 0.1
PTPN6-201ENST00000318974 ZBTB1Q9Y2K1 713 aa15.7■□□□□ 0.1
PTPN6-201ENST00000318974 ZNF330Q9Y3S2 320 aaPredicted RBP15.7■□□□□ 0.1
PTPN6-201ENST00000318974 TJP1Q07157 1748 aa15.7■□□□□ 0.1
PTPN6-201ENST00000318974 GRM8O00222 908 aa15.69■□□□□ 0.1
PTPN6-201ENST00000318974 ATP8B2P98198 1209 aa15.69■□□□□ 0.1
PTPN6-201ENST00000318974 ITPK1Q13572 414 aa15.69■□□□□ 0.1
PTPN6-201ENST00000318974 BECN1Q14457 450 aa15.69■□□□□ 0.1
PTPN6-201ENST00000318974 TBC1D32Q96NH3 1257 aa15.69■□□□□ 0.1
PTPN6-201ENST00000318974 KAT6BQ8WYB5 2073 aa15.69■□□□□ 0.1
PTPN6-201ENST00000318974 NHSQ6T4R5 1651 aa15.69■□□□□ 0.1
PTPN6-201ENST00000318974 IL6STP40189 918 aaPredicted RBP15.68■□□□□ 0.1
PTPN6-201ENST00000318974 NUCB1Q02818 461 aa15.68■□□□□ 0.1
PTPN6-201ENST00000318974 KIF6Q6ZMV9 814 aa15.68■□□□□ 0.1
PTPN6-201ENST00000318974 PTF1AQ7RTS3 328 aa15.68■□□□□ 0.1
PTPN6-201ENST00000318974 ZBTB3Q9H5J0 574 aa15.68■□□□□ 0.1
PTPN6-201ENST00000318974 DCTPP1Q9H773 170 aa15.68■□□□□ 0.1
PTPN6-201ENST00000318974 UTYO14607 1347 aa15.68■□□□□ 0.1
PTPN6-201ENST00000318974 GCKRQ14397 625 aa15.68■□□□□ 0.1
PTPN6-201ENST00000318974 KRT27Q7Z3Y8 459 aa15.68■□□□□ 0.1
PTPN6-201ENST00000318974 CCDC87Q9NVE4 849 aa15.68■□□□□ 0.1
PTPN6-201ENST00000318974 CICQ96RK0 1608 aaPredicted RBP15.67■□□□□ 0.1
PTPN6-201ENST00000318974 CRKLP46109 303 aaKnown RBP15.67■□□□□ 0.1
PTPN6-201ENST00000318974 ARFGEF2Q9Y6D5 1785 aa15.66■□□□□ 0.1
PTPN6-201ENST00000318974 ATP5J2-PTCD1G3V325 749 aa15.66■□□□□ 0.1
PTPN6-201ENST00000318974 INTS5Q6P9B9 1019 aaKnown RBP15.66■□□□□ 0.1
PTPN6-201ENST00000318974 FAM196AQ6ZSG2 479 aa15.66■□□□□ 0.1
PTPN6-201ENST00000318974 PNMA6EA0A0J9YXQ4 647 aa15.66■□□□□ 0.1
PTPN6-201ENST00000318974 ANKRD45Q5TZF3 282 aa15.66■□□□□ 0.1
PTPN6-201ENST00000318974 CHD1LQ86WJ1 897 aa15.66■□□□□ 0.1
PTPN6-201ENST00000318974 ARXQ96QS3 562 aa15.66■□□□□ 0.1
PTPN6-201ENST00000318974 MAP3K15Q6ZN16 1313 aa15.65■□□□□ 0.1
PTPN6-201ENST00000318974 BCL11BQ9C0K0 894 aaPredicted RBP15.65■□□□□ 0.1
PTPN6-201ENST00000318974 EIF5P55010 431 aaKnown RBP15.64■□□□□ 0.09
PTPN6-201ENST00000318974 TCIRG1Q13488 830 aa15.64■□□□□ 0.09
PTPN6-201ENST00000318974 NFKBIBQ15653 356 aa15.64■□□□□ 0.09
PTPN6-201ENST00000318974 PPP1R42Q7Z4L9 355 aa15.64■□□□□ 0.09
PTPN6-201ENST00000318974 CCDC191Q8NCU4 936 aa15.64■□□□□ 0.09
PTPN6-201ENST00000318974 SSH3Q8TE77 659 aa15.64■□□□□ 0.09
PTPN6-201ENST00000318974 SUCLG2Q96I99 432 aa15.64■□□□□ 0.09
PTPN6-201ENST00000318974 LNPKQ9C0E8 428 aa15.64■□□□□ 0.09
PTPN6-201ENST00000318974 CWC25Q9NXE8 425 aaPredicted RBP15.64■□□□□ 0.09
PTPN6-201ENST00000318974 ZNF831Q5JPB2 1677 aa15.64■□□□□ 0.09
PTPN6-201ENST00000318974 NUP188Q5SRE5 1749 aa15.63■□□□□ 0.09
PTPN6-201ENST00000318974 A0A087WZG4 1122 aa15.63■□□□□ 0.09
PTPN6-201ENST00000318974 RXRBP28702 533 aa15.63■□□□□ 0.09
PTPN6-201ENST00000318974 MTX1Q13505 466 aa15.63■□□□□ 0.09
PTPN6-201ENST00000318974 DZIP3Q86Y13 1208 aaKnown RBP15.63■□□□□ 0.09
PTPN6-201ENST00000318974 ISCA1Q9BUE6 129 aa15.63■□□□□ 0.09
PTPN6-201ENST00000318974 BTAF1O14981 1849 aa15.63■□□□□ 0.09
PTPN6-201ENST00000318974 POLA2Q14181 598 aa15.63■□□□□ 0.09
PTPN6-201ENST00000318974 GIGYF2Q6Y7W6 1299 aaKnown RBP15.63■□□□□ 0.09
PTPN6-201ENST00000318974 LINC00116Q8NCU8 138 aa15.63■□□□□ 0.09
PTPN6-201ENST00000318974 ERVV-1B6SEH8 477 aa15.62■□□□□ 0.09
PTPN6-201ENST00000318974 SRGAP3O43295 1099 aa15.62■□□□□ 0.09
PTPN6-201ENST00000318974 HSP90AB3PQ58FF7 597 aa15.62■□□□□ 0.09
PTPN6-201ENST00000318974 TRIM28Q13263 835 aaKnown RBP15.62■□□□□ 0.09
PTPN6-201ENST00000318974 CCNL1Q9UK58 526 aaPredicted RBP15.62■□□□□ 0.09
PTPN6-201ENST00000318974 RREB1Q92766 1687 aa15.61■□□□□ 0.09
PTPN6-201ENST00000318974 CNTNAP4Q9C0A0 1308 aa15.61■□□□□ 0.09
PTPN6-201ENST00000318974 UBE3BQ7Z3V4 1068 aa15.61■□□□□ 0.09
PTPN6-201ENST00000318974 KAZALD1Q96I82 304 aa15.61■□□□□ 0.09
PTPN6-201ENST00000318974 BICC1Q9H694 974 aaKnown RBP15.61■□□□□ 0.09
PTPN6-201ENST00000318974 TBC1D2BQ9UPU7 963 aa15.61■□□□□ 0.09
PTPN6-201ENST00000318974 COL15A1P39059 1388 aa15.61■□□□□ 0.09
PTPN6-201ENST00000318974 H7C1W4 665 aa15.6■□□□□ 0.09
PTPN6-201ENST00000318974 KCNQ4P56696 695 aa15.6■□□□□ 0.09
PTPN6-201ENST00000318974 HLFQ16534 295 aa15.6■□□□□ 0.09
PTPN6-201ENST00000318974 BMP2KLQ5H9B9 411 aa15.6■□□□□ 0.09
PTPN6-201ENST00000318974 CASP7P55210 303 aa15.6■□□□□ 0.09
PTPN6-201ENST00000318974 RC3H1Q5TC82 1133 aaKnown RBP15.6■□□□□ 0.09
PTPN6-201ENST00000318974 C22orf23Q9BZE7 217 aa15.6■□□□□ 0.09
PTPN6-201ENST00000318974 EXOC6BQ9Y2D4 811 aa15.6■□□□□ 0.09
PTPN6-201ENST00000318974 SBF2Q86WG5 1849 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms