RNA–Protein interactions for RNA: ENST00000315994.6

SH3PXD2A-201, Transcript of SH3 and PX domains 2A, humanhuman

TSL 1 (best)

Gene SH3PXD2A, Length 5,504 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2A-201ENST00000315994 CCDC83Q8IWF9 413 aa15.1■□□□□ 0.01
SH3PXD2A-201ENST00000315994 NFATC2IPQ8NCF5 419 aa15.09■□□□□ 0.01
SH3PXD2A-201ENST00000315994 BABAM1Q9NWV8 329 aa15.09■□□□□ 0.01
SH3PXD2A-201ENST00000315994 ZNF213O14771 459 aa15.09■□□□□ 0.01
SH3PXD2A-201ENST00000315994 TSPYL6Q8N831 410 aa15.09■□□□□ 0.01
SH3PXD2A-201ENST00000315994 INSRP06213 1382 aa15.09■□□□□ 0.01
SH3PXD2A-201ENST00000315994 ATP6V1AP38606 617 aa15.09■□□□□ 0.01
SH3PXD2A-201ENST00000315994 GOLIM4O00461 696 aa15.09■□□□□ 0.01
SH3PXD2A-201ENST00000315994 CCDC152Q4G0S7 254 aa15.09■□□□□ 0.01
SH3PXD2A-201ENST00000315994 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.09■□□□□ 0.01
SH3PXD2A-201ENST00000315994 DACH1Q9UI36 760 aa15.09■□□□□ 0.01
SH3PXD2A-201ENST00000315994 MINDY4BA8MYZ0 360 aa15.08■□□□□ 0.01
SH3PXD2A-201ENST00000315994 FILIP1LQ4L180 1135 aa15.08■□□□□ 0.01
SH3PXD2A-201ENST00000315994 DDX46Q7L014 1031 aaKnown RBP15.08■□□□□ 0.01
SH3PXD2A-201ENST00000315994 SLF2Q8IX21 1173 aa15.08■□□□□ 0.01
SH3PXD2A-201ENST00000315994 RNF41Q9H4P4 317 aaPredicted RBP15.08■□□□□ 0.01
SH3PXD2A-201ENST00000315994 KDM6BO15054 1643 aa15.08■□□□□ 0.01
SH3PXD2A-201ENST00000315994 POLR3DP05423 398 aaPredicted RBP15.08■□□□□ 0
SH3PXD2A-201ENST00000315994 RFC4P35249 363 aa15.08■□□□□ 0
SH3PXD2A-201ENST00000315994 HECW2Q9P2P5 1572 aa15.08■□□□□ 0
SH3PXD2A-201ENST00000315994 PLEKHG3A1L390 1219 aa15.08■□□□□ 0
SH3PXD2A-201ENST00000315994 LINS1Q8NG48 757 aa15.08■□□□□ 0
SH3PXD2A-201ENST00000315994 DDX11Q96FC9 970 aa15.08■□□□□ 0
SH3PXD2A-201ENST00000315994 SBNO2Q9Y2G9 1366 aa15.08■□□□□ 0
SH3PXD2A-201ENST00000315994 CCDC196A0A1B0GTZ2 297 aa15.07■□□□□ 0
SH3PXD2A-201ENST00000315994 SMC2O95347 1197 aa15.07■□□□□ 0
SH3PXD2A-201ENST00000315994 LIMCH1Q9UPQ0 1083 aa15.07■□□□□ 0
SH3PXD2A-201ENST00000315994 ZMYM4Q5VZL5 1548 aa15.07■□□□□ 0
SH3PXD2A-201ENST00000315994 PDILTQ8N807 584 aa15.07■□□□□ 0
SH3PXD2A-201ENST00000315994 MAGEC2Q9UBF1 373 aaPredicted RBP15.07■□□□□ 0
SH3PXD2A-201ENST00000315994 UQCRFS1P1P0C7P4 283 aa15.07■□□□□ 0
SH3PXD2A-201ENST00000315994 MYOM2P54296 1465 aa15.07■□□□□ 0
SH3PXD2A-201ENST00000315994 KRT18P05783 430 aaKnown RBP15.07■□□□□ 0
SH3PXD2A-201ENST00000315994 CCDC173Q0VFZ6 552 aa15.07■□□□□ 0
SH3PXD2A-201ENST00000315994 EFCAB6Q5THR3 1501 aa15.06■□□□□ 0
SH3PXD2A-201ENST00000315994 WWC2Q6AWC2 1192 aa15.06■□□□□ 0
SH3PXD2A-201ENST00000315994 JARID2Q92833 1246 aaPredicted RBP15.06■□□□□ 0
SH3PXD2A-201ENST00000315994 ACSBG1Q96GR2 724 aa15.06■□□□□ 0
SH3PXD2A-201ENST00000315994 MKNK2Q9HBH9 465 aa15.06■□□□□ 0
SH3PXD2A-201ENST00000315994 ORAI2Q96SN7 254 aa15.06■□□□□ 0
SH3PXD2A-201ENST00000315994 HMG20BQ9P0W2 317 aa15.06■□□□□ 0
SH3PXD2A-201ENST00000315994 CEP131Q9UPN4 1083 aa15.06■□□□□ 0
SH3PXD2A-201ENST00000315994 SHROOM2Q13796 1616 aa15.05■□□□□ 0
SH3PXD2A-201ENST00000315994 C8orf37Q96NL8 207 aa15.05■□□□□ 0
SH3PXD2A-201ENST00000315994 LMTK3Q96Q04 1460 aa15.05■□□□□ -0
SH3PXD2A-201ENST00000315994 PDE1AP54750 535 aa15.05■□□□□ -0
SH3PXD2A-201ENST00000315994 NBPF6Q5VWK0 638 aa15.05■□□□□ -0
SH3PXD2A-201ENST00000315994 NBPF5PQ86XG9 351 aaPredicted RBP15.05■□□□□ -0
SH3PXD2A-201ENST00000315994 NBPF4Q96M43 638 aa15.05■□□□□ -0
SH3PXD2A-201ENST00000315994 LTKP29376 864 aa15.05■□□□□ -0
SH3PXD2A-201ENST00000315994 HMGN5P82970 282 aaKnown RBP15.05■□□□□ -0
SH3PXD2A-201ENST00000315994 TSHZ3Q63HK5 1081 aa15.05■□□□□ -0
SH3PXD2A-201ENST00000315994 IQCA1Q86XH1 822 aa15.05■□□□□ -0
SH3PXD2A-201ENST00000315994 TBC1D2Q9BYX2 928 aa15.05■□□□□ -0
SH3PXD2A-201ENST00000315994 SPATA31E1Q6ZUB1 1445 aa15.05■□□□□ -0
SH3PXD2A-201ENST00000315994 NUP62CLQ9H1M0 184 aa15.04■□□□□ -0
SH3PXD2A-201ENST00000315994 ST5P78524 1137 aa15.04■□□□□ -0
SH3PXD2A-201ENST00000315994 STIM1Q13586 685 aa15.04■□□□□ -0
SH3PXD2A-201ENST00000315994 SDSP20132 328 aa15.04■□□□□ -0
SH3PXD2A-201ENST00000315994 IL15P40933 162 aaPredicted RBP15.04■□□□□ -0
SH3PXD2A-201ENST00000315994 DHX8Q14562 1220 aaKnown RBP15.04■□□□□ -0
SH3PXD2A-201ENST00000315994 TBC1D32Q96NH3 1257 aa15.04■□□□□ -0
SH3PXD2A-201ENST00000315994 KRT24Q2M2I5 525 aa15.04■□□□□ -0
SH3PXD2A-201ENST00000315994 LMBR1LQ6UX01 489 aa15.03■□□□□ -0
SH3PXD2A-201ENST00000315994 SLC12A7Q9Y666 1083 aa15.03■□□□□ -0
SH3PXD2A-201ENST00000315994 CFAP65Q6ZU64 1925 aaKnown RBP15.03■□□□□ -0
SH3PXD2A-201ENST00000315994 ARHGEF10O15013 1369 aa15.03■□□□□ -0
SH3PXD2A-201ENST00000315994 WDHD1O75717 1129 aaPredicted RBP15.03■□□□□ -0
SH3PXD2A-201ENST00000315994 CEP85Q6P2H3 762 aa15.03■□□□□ -0
SH3PXD2A-201ENST00000315994 SMARCE1Q969G3 411 aa15.03■□□□□ -0
SH3PXD2A-201ENST00000315994 GPS2Q13227 327 aa15.03■□□□□ -0
SH3PXD2A-201ENST00000315994 CRACR2BQ8N4Y2 399 aaPredicted RBP15.03■□□□□ -0
SH3PXD2A-201ENST00000315994 MPHOSPH10O00566 681 aaKnown RBP15.03■□□□□ -0
SH3PXD2A-201ENST00000315994 OFD1O75665 1012 aa15.03■□□□□ -0
SH3PXD2A-201ENST00000315994 LDHCP07864 332 aa15.03■□□□□ -0
SH3PXD2A-201ENST00000315994 RLBP1P12271 317 aa15.03■□□□□ -0
SH3PXD2A-201ENST00000315994 SPTY2D1Q68D10 685 aaPredicted RBP15.03■□□□□ -0
SH3PXD2A-201ENST00000315994 SNRKQ9NRH2 765 aa15.03■□□□□ -0
SH3PXD2A-201ENST00000315994 ZBTB40Q9NUA8 1239 aa15.03■□□□□ -0
SH3PXD2A-201ENST00000315994 BLMP54132 1417 aaPredicted RBP15.03■□□□□ -0
SH3PXD2A-201ENST00000315994 PLEKHG1Q9ULL1 1385 aa15.03■□□□□ -0
SH3PXD2A-201ENST00000315994 CTCFLQ8NI51 663 aaPredicted RBP15.03■□□□□ -0
SH3PXD2A-201ENST00000315994 CDCA7Q9BWT1 371 aaPredicted RBP15.03■□□□□ -0
SH3PXD2A-201ENST00000315994 HOXB7P09629 217 aa15.02■□□□□ -0
SH3PXD2A-201ENST00000315994 NAP1L1P55209 391 aaKnown RBP15.02■□□□□ -0
SH3PXD2A-201ENST00000315994 ZNF444Q8N0Y2 327 aaPredicted RBP15.02■□□□□ -0
SH3PXD2A-201ENST00000315994 SEC63Q9UGP8 760 aaKnown RBP15.02■□□□□ -0
SH3PXD2A-201ENST00000315994 ZFYP08048 801 aaPredicted RBP15.02■□□□□ -0
SH3PXD2A-201ENST00000315994 SETDB2Q96T68 719 aa15.02■□□□□ -0
SH3PXD2A-201ENST00000315994 DCTPP1Q9H773 170 aa15.02■□□□□ -0
SH3PXD2A-201ENST00000315994 TNNQ9UQP3 1299 aa15.02■□□□□ -0
SH3PXD2A-201ENST00000315994 C6orf229H3BNL8 230 aa15.02□□□□□ -0.01
SH3PXD2A-201ENST00000315994 RANBP6O60518 1105 aaKnown RBP15.02□□□□□ -0.01
SH3PXD2A-201ENST00000315994 ANKRD18AQ8IVF6 992 aa15.02□□□□□ -0.01
SH3PXD2A-201ENST00000315994 ADCY10Q96PN6 1610 aa15.02□□□□□ -0.01
SH3PXD2A-201ENST00000315994 DZIP3Q86Y13 1208 aaKnown RBP15.02□□□□□ -0.01
SH3PXD2A-201ENST00000315994 SCAND2PQ9GZW5 306 aaPredicted RBP15.02□□□□□ -0.01
SH3PXD2A-201ENST00000315994 BTG4Q9NY30 223 aa15.02□□□□□ -0.01
SH3PXD2A-201ENST00000315994 TMEM132AQ24JP5 1023 aa15.01□□□□□ -0.01
SH3PXD2A-201ENST00000315994 C8orf76Q96K31 380 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms