RNA–Protein interactions for RNA: ENST00000315948.10

LYSMD3-201, Transcript of LysM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD3, Length 4,259 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-201ENST00000315948 CHGBP05060 677 aa8.68□□□□□ -1.02
LYSMD3-201ENST00000315948 SSH3Q8TE77 659 aa8.68□□□□□ -1.02
LYSMD3-201ENST00000315948 ANP32EQ9BTT0 268 aa8.68□□□□□ -1.02
LYSMD3-201ENST00000315948 HSP90AB1P08238 724 aaKnown RBP8.67□□□□□ -1.02
LYSMD3-201ENST00000315948 GCKRQ14397 625 aa8.67□□□□□ -1.02
LYSMD3-201ENST00000315948 C22orf23Q9BZE7 217 aa8.67□□□□□ -1.02
LYSMD3-201ENST00000315948 LRRCC1Q9C099 1032 aa8.67□□□□□ -1.02
LYSMD3-201ENST00000315948 ERVV-2B6SEH9 535 aa8.67□□□□□ -1.02
LYSMD3-201ENST00000315948 TOM1O60784 492 aa8.67□□□□□ -1.02
LYSMD3-201ENST00000315948 MRC1P22897 1456 aa8.67□□□□□ -1.02
LYSMD3-201ENST00000315948 GPTP24298 496 aa8.67□□□□□ -1.02
LYSMD3-201ENST00000315948 LINS1Q8NG48 757 aa8.67□□□□□ -1.02
LYSMD3-201ENST00000315948 NGLY1Q96IV0 654 aa8.67□□□□□ -1.02
LYSMD3-201ENST00000315948 CHMP4BQ9H444 224 aaKnown RBP8.67□□□□□ -1.02
LYSMD3-201ENST00000315948 IBTKQ9P2D0 1353 aaPredicted RBP8.67□□□□□ -1.02
LYSMD3-201ENST00000315948 KCPQ6ZWJ8 1503 aa8.67□□□□□ -1.02
LYSMD3-201ENST00000315948 SPATA31A1Q5TZJ5 1347 aa8.67□□□□□ -1.02
LYSMD3-201ENST00000315948 HLFQ16534 295 aa8.67□□□□□ -1.02
LYSMD3-201ENST00000315948 PHLPP1O60346 1717 aa8.67□□□□□ -1.02
LYSMD3-201ENST00000315948 HMMRO75330 724 aa8.66□□□□□ -1.02
LYSMD3-201ENST00000315948 POLA2Q14181 598 aa8.66□□□□□ -1.02
LYSMD3-201ENST00000315948 RILPL2Q969X0 211 aa8.66□□□□□ -1.02
LYSMD3-201ENST00000315948 ZBTB1Q9Y2K1 713 aa8.66□□□□□ -1.02
LYSMD3-201ENST00000315948 A0A087WZG4 1122 aa8.66□□□□□ -1.02
LYSMD3-201ENST00000315948 FAM177BA6PVY3 158 aa8.66□□□□□ -1.02
LYSMD3-201ENST00000315948 RHPN1Q8TCX5 695 aa8.66□□□□□ -1.02
LYSMD3-201ENST00000315948 METTL22Q9BUU2 404 aaPredicted RBP8.66□□□□□ -1.02
LYSMD3-201ENST00000315948 TBC1D2BQ9UPU7 963 aa8.66□□□□□ -1.02
LYSMD3-201ENST00000315948 OS9Q13438 667 aaPredicted RBP8.66□□□□□ -1.02
LYSMD3-201ENST00000315948 AEBP2Q6ZN18 517 aaPredicted RBP8.66□□□□□ -1.02
LYSMD3-201ENST00000315948 ZNF594Q96JF6 807 aaPredicted RBP8.66□□□□□ -1.02
LYSMD3-201ENST00000315948 FOXD4L1Q9NU39 408 aa8.66□□□□□ -1.02
LYSMD3-201ENST00000315948 DISP2A7MBM2 1401 aa8.66□□□□□ -1.02
LYSMD3-201ENST00000315948 DTNBO60941 627 aa8.66□□□□□ -1.02
LYSMD3-201ENST00000315948 MX1P20591 662 aa8.66□□□□□ -1.02
LYSMD3-201ENST00000315948 DDB1Q16531 1140 aa8.66□□□□□ -1.02
LYSMD3-201ENST00000315948 KIF2CQ99661 725 aa8.66□□□□□ -1.02
LYSMD3-201ENST00000315948 CCDC8Q9H0W5 538 aaPredicted RBP8.66□□□□□ -1.02
LYSMD3-201ENST00000315948 CHMP3Q9Y3E7 222 aa8.66□□□□□ -1.02
LYSMD3-201ENST00000315948 SALL3Q9BXA9 1300 aa8.65□□□□□ -1.02
LYSMD3-201ENST00000315948 TRIM6-TRIM34B2RNG4 842 aa8.65□□□□□ -1.02
LYSMD3-201ENST00000315948 EDC3Q96F86 508 aaKnown RBP8.65□□□□□ -1.02
LYSMD3-201ENST00000315948 TBC1D2Q9BYX2 928 aa8.65□□□□□ -1.02
LYSMD3-201ENST00000315948 AHDC1Q5TGY3 1603 aaPredicted RBP8.65□□□□□ -1.02
LYSMD3-201ENST00000315948 SASH1O94885 1247 aa8.65□□□□□ -1.02
LYSMD3-201ENST00000315948 HSPA1LP34931 641 aa8.65□□□□□ -1.03
LYSMD3-201ENST00000315948 FAM89AQ96GI7 184 aa8.65□□□□□ -1.03
LYSMD3-201ENST00000315948 PARP4Q9UKK3 1724 aaKnown RBP8.64□□□□□ -1.03
LYSMD3-201ENST00000315948 DDX58O95786 925 aaKnown RBP8.64□□□□□ -1.03
LYSMD3-201ENST00000315948 PXDNLA1KZ92 1463 aa8.64□□□□□ -1.03
LYSMD3-201ENST00000315948 ABCC6O95255 1503 aa8.64□□□□□ -1.03
LYSMD3-201ENST00000315948 NEXNQ0ZGT2 675 aa8.63□□□□□ -1.03
LYSMD3-201ENST00000315948 SLFNL1Q499Z3 407 aa8.63□□□□□ -1.03
LYSMD3-201ENST00000315948 EAF2Q96CJ1 260 aaPredicted RBP8.63□□□□□ -1.03
LYSMD3-201ENST00000315948 SPATA31A5Q5VU36 1347 aa8.63□□□□□ -1.03
LYSMD3-201ENST00000315948 SPATA31A7Q8IWB4 1347 aa8.63□□□□□ -1.03
LYSMD3-201ENST00000315948 ITPK1Q13572 414 aa8.63□□□□□ -1.03
LYSMD3-201ENST00000315948 LMBR1LQ6UX01 489 aa8.63□□□□□ -1.03
LYSMD3-201ENST00000315948 ALDH1L1O75891 902 aa8.63□□□□□ -1.03
LYSMD3-201ENST00000315948 LRP6O75581 1613 aa8.63□□□□□ -1.03
LYSMD3-201ENST00000315948 BCL9O00512 1426 aa8.63□□□□□ -1.03
LYSMD3-201ENST00000315948 CACNA1FO60840 1977 aa8.63□□□□□ -1.03
LYSMD3-201ENST00000315948 PLBD2Q8NHP8 589 aa8.63□□□□□ -1.03
LYSMD3-201ENST00000315948 PI4K2BQ8TCG2 481 aa8.63□□□□□ -1.03
LYSMD3-201ENST00000315948 CDC45O75419 566 aa8.62□□□□□ -1.03
LYSMD3-201ENST00000315948 CASP7P55210 303 aa8.62□□□□□ -1.03
LYSMD3-201ENST00000315948 AMIGO3Q86WK7 504 aa8.62□□□□□ -1.03
LYSMD3-201ENST00000315948 PUS3Q9BZE2 481 aaKnown RBP8.62□□□□□ -1.03
LYSMD3-201ENST00000315948 UPF2Q9HAU5 1272 aaKnown RBP8.62□□□□□ -1.03
LYSMD3-201ENST00000315948 TNS2Q63HR2 1409 aa8.62□□□□□ -1.03
LYSMD3-201ENST00000315948 BCL9LQ86UU0 1499 aa8.62□□□□□ -1.03
LYSMD3-201ENST00000315948 CYP19A1P11511 503 aaPredicted RBP8.62□□□□□ -1.03
LYSMD3-201ENST00000315948 COL9A3Q14050 684 aaPredicted RBP8.62□□□□□ -1.03
LYSMD3-201ENST00000315948 AACSQ86V21 672 aa8.62□□□□□ -1.03
LYSMD3-201ENST00000315948 PLCH1Q4KWH8 1693 aa8.62□□□□□ -1.03
LYSMD3-201ENST00000315948 COL14A1Q05707 1796 aaKnown RBP8.62□□□□□ -1.03
LYSMD3-201ENST00000315948 LRRC24Q50LG9 513 aa8.61□□□□□ -1.03
LYSMD3-201ENST00000315948 PALD1Q9ULE6 856 aa8.61□□□□□ -1.03
LYSMD3-201ENST00000315948 FOXO4P98177 505 aa8.61□□□□□ -1.03
LYSMD3-201ENST00000315948 PTPN12Q05209 780 aaKnown RBP8.61□□□□□ -1.03
LYSMD3-201ENST00000315948 ATP6V1AP38606 617 aa8.61□□□□□ -1.03
LYSMD3-201ENST00000315948 RFX5P48382 616 aaPredicted RBP8.61□□□□□ -1.03
LYSMD3-201ENST00000315948 TFCP2Q12800 502 aa8.61□□□□□ -1.03
LYSMD3-201ENST00000315948 CCDC24Q8N4L8 307 aa8.61□□□□□ -1.03
LYSMD3-201ENST00000315948 SNAP23O00161 211 aa8.6□□□□□ -1.03
LYSMD3-201ENST00000315948 DAXXQ9UER7 740 aaPredicted RBP8.6□□□□□ -1.03
LYSMD3-201ENST00000315948 UTYO14607 1347 aa8.6□□□□□ -1.03
LYSMD3-201ENST00000315948 ITGB4P16144 1822 aa8.6□□□□□ -1.03
LYSMD3-201ENST00000315948 NOL8Q76FK4 1167 aaKnown RBP8.6□□□□□ -1.03
LYSMD3-201ENST00000315948 SLC51AQ86UW1 340 aa8.6□□□□□ -1.03
LYSMD3-201ENST00000315948 KIF1BPQ96EK5 621 aa8.6□□□□□ -1.03
LYSMD3-201ENST00000315948 BOLA2Q9H3K6 86 aa8.6□□□□□ -1.03
LYSMD3-201ENST00000315948 USP21Q9UK80 565 aa8.6□□□□□ -1.03
LYSMD3-201ENST00000315948 MTX1Q13505 466 aa8.6□□□□□ -1.03
LYSMD3-201ENST00000315948 LARP6Q9BRS8 491 aaKnown RBP8.6□□□□□ -1.03
LYSMD3-201ENST00000315948 TIMM10P62072 90 aa8.6□□□□□ -1.03
LYSMD3-201ENST00000315948 USP26Q9BXU7 913 aa8.6□□□□□ -1.03
LYSMD3-201ENST00000315948 SLIT2O94813 1529 aa8.6□□□□□ -1.03
LYSMD3-201ENST00000315948 COL22A1Q8NFW1 1626 aaPredicted RBP8.6□□□□□ -1.03
LYSMD3-201ENST00000315948 UBR2Q8IWV8 1755 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms