RNA–Protein interactions for RNA: ENST00000312960.3

SIAH2-201, Transcript of siah E3 ubiquitin protein ligase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIAH2, Length 2,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIAH2-201ENST00000312960 CADPS2Q86UW7 1296 aa27.51■■■□□ 2
SIAH2-201ENST00000312960 SNX14Q9Y5W7 946 aa27.51■■■□□ 2
SIAH2-201ENST00000312960 GRM8O00222 908 aa27.51■■□□□ 1.99
SIAH2-201ENST00000312960 DDX58O95786 925 aaKnown RBP27.51■■□□□ 1.99
SIAH2-201ENST00000312960 ZC3H6P61129 1189 aaKnown RBP27.51■■□□□ 1.99
SIAH2-201ENST00000312960 CHAMP1Q96JM3 812 aa27.51■■□□□ 1.99
SIAH2-201ENST00000312960 KAZALD1Q96I82 304 aa27.5■■□□□ 1.99
SIAH2-201ENST00000312960 ECHDC1Q9NTX5 307 aa27.5■■□□□ 1.99
SIAH2-201ENST00000312960 PA2G4Q9UQ80 394 aaKnown RBP27.5■■□□□ 1.99
SIAH2-201ENST00000312960 ZNF335Q9H4Z2 1342 aaPredicted RBP27.5■■□□□ 1.99
SIAH2-201ENST00000312960 CWC27Q6UX04 472 aaKnown RBP27.5■■□□□ 1.99
SIAH2-201ENST00000312960 FOXD4L5Q5VV16 416 aaPredicted RBP27.49■■□□□ 1.99
SIAH2-201ENST00000312960 FOXD4L4Q8WXT5 416 aaPredicted RBP27.49■■□□□ 1.99
SIAH2-201ENST00000312960 ANO8Q9HCE9 1232 aaPredicted RBP27.49■■□□□ 1.99
SIAH2-201ENST00000312960 NASPP49321 788 aaPredicted RBP27.49■■□□□ 1.99
SIAH2-201ENST00000312960 ZNF790Q6PG37 636 aa27.49■■□□□ 1.99
SIAH2-201ENST00000312960 KIAA1211Q6ZU35 1233 aa27.48■■□□□ 1.99
SIAH2-201ENST00000312960 SUCLG2Q96I99 432 aa27.48■■□□□ 1.99
SIAH2-201ENST00000312960 ALS2Q96Q42 1657 aa27.48■■□□□ 1.99
SIAH2-201ENST00000312960 CLCN1P35523 988 aa27.48■■□□□ 1.99
SIAH2-201ENST00000312960 RAPGEF4Q8WZA2 1011 aa27.48■■□□□ 1.99
SIAH2-201ENST00000312960 TTC14Q96N46 770 aa27.48■■□□□ 1.99
SIAH2-201ENST00000312960 RASEFQ8IZ41 740 aa27.47■■□□□ 1.99
SIAH2-201ENST00000312960 SLC52A2Q9HAB3 445 aa27.47■■□□□ 1.99
SIAH2-201ENST00000312960 IFIT2P09913 472 aaKnown RBP27.47■■□□□ 1.99
SIAH2-201ENST00000312960 AIMP1Q12904 312 aaKnown RBP27.46■■□□□ 1.99
SIAH2-201ENST00000312960 GPATCH3Q96I76 525 aa27.46■■□□□ 1.99
SIAH2-201ENST00000312960 NPHP3Q7Z494 1330 aa27.46■■□□□ 1.99
SIAH2-201ENST00000312960 PPP1R9BQ96SB3 815 aa27.46■■□□□ 1.99
SIAH2-201ENST00000312960 SPG7Q9UQ90 795 aa27.46■■□□□ 1.99
SIAH2-201ENST00000312960 KDM6AO15550 1401 aaPredicted RBP27.46■■□□□ 1.99
SIAH2-201ENST00000312960 SLC39A6Q13433 755 aa27.45■■□□□ 1.99
SIAH2-201ENST00000312960 RUFY2Q8WXA3 655 aa27.45■■□□□ 1.99
SIAH2-201ENST00000312960 BICC1Q9H694 974 aaKnown RBP27.45■■□□□ 1.99
SIAH2-201ENST00000312960 DIAPH3Q9NSV4 1193 aa27.45■■□□□ 1.99
SIAH2-201ENST00000312960 XIRP1Q702N8 1843 aaKnown RBP27.45■■□□□ 1.98
SIAH2-201ENST00000312960 IGKV5-2P06315 115 aa27.45■■□□□ 1.98
SIAH2-201ENST00000312960 NLRP2Q9NX02 1062 aa27.45■■□□□ 1.98
SIAH2-201ENST00000312960 CCDC173Q0VFZ6 552 aa27.44■■□□□ 1.98
SIAH2-201ENST00000312960 SASH1O94885 1247 aa27.44■■□□□ 1.98
SIAH2-201ENST00000312960 PHKG2P15735 406 aa27.44■■□□□ 1.98
SIAH2-201ENST00000312960 RBM27Q9P2N5 1060 aaKnown RBP27.44■■□□□ 1.98
SIAH2-201ENST00000312960 LARP1Q6PKG0 1096 aaKnown RBP27.43■■□□□ 1.98
SIAH2-201ENST00000312960 AACSQ86V21 672 aa27.43■■□□□ 1.98
SIAH2-201ENST00000312960 TRIM44Q96DX7 344 aaPredicted RBP27.43■■□□□ 1.98
SIAH2-201ENST00000312960 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.43■■□□□ 1.98
SIAH2-201ENST00000312960 SCN11AQ9UI33 1791 aa27.43■■□□□ 1.98
SIAH2-201ENST00000312960 TATP17735 454 aaPredicted RBP27.43■■□□□ 1.98
SIAH2-201ENST00000312960 EVI5LQ96CN4 794 aa27.43■■□□□ 1.98
SIAH2-201ENST00000312960 NSFL1CQ9UNZ2 370 aaKnown RBP27.43■■□□□ 1.98
SIAH2-201ENST00000312960 ESPNB1AK53 854 aa27.42■■□□□ 1.98
SIAH2-201ENST00000312960 RIC3Q7Z5B4 369 aa27.42■■□□□ 1.98
SIAH2-201ENST00000312960 NFATC2IPQ8NCF5 419 aa27.42■■□□□ 1.98
SIAH2-201ENST00000312960 MBD3O95983 291 aa27.42■■□□□ 1.98
SIAH2-201ENST00000312960 TMEM63CQ9P1W3 806 aa27.42■■□□□ 1.98
SIAH2-201ENST00000312960 G3BP1Q13283 466 aaKnown RBP eCLIP27.41■■□□□ 1.98
SIAH2-201ENST00000312960 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP27.41■■□□□ 1.98
SIAH2-201ENST00000312960 AK2P54819 239 aa27.41■■□□□ 1.98
SIAH2-201ENST00000312960 WDR33Q9C0J8 1336 aaKnown RBP27.4■■□□□ 1.98
SIAH2-201ENST00000312960 PRIM1P49642 420 aaKnown RBP27.4■■□□□ 1.98
SIAH2-201ENST00000312960 EAF2Q96CJ1 260 aaPredicted RBP27.4■■□□□ 1.98
SIAH2-201ENST00000312960 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.4■■□□□ 1.98
SIAH2-201ENST00000312960 ERBB4Q15303 1308 aa27.4■■□□□ 1.98
SIAH2-201ENST00000312960 PTH1RQ03431 593 aa27.4■■□□□ 1.98
SIAH2-201ENST00000312960 KCNB2Q92953 911 aa27.4■■□□□ 1.98
SIAH2-201ENST00000312960 LIMCH1Q9UPQ0 1083 aa27.4■■□□□ 1.98
SIAH2-201ENST00000312960 C5P01031 1676 aa27.4■■□□□ 1.98
SIAH2-201ENST00000312960 NEURL1BA8MQ27 555 aa27.39■■□□□ 1.98
SIAH2-201ENST00000312960 RUFY3Q7L099 469 aa27.39■■□□□ 1.98
SIAH2-201ENST00000312960 RBSNQ9H1K0 784 aa27.39■■□□□ 1.98
SIAH2-201ENST00000312960 IFNL2Q8IZJ0 200 aa27.39■■□□□ 1.97
SIAH2-201ENST00000312960 ANP32BQ92688 251 aaKnown RBP27.39■■□□□ 1.97
SIAH2-201ENST00000312960 MEGF6O75095 1541 aa27.39■■□□□ 1.97
SIAH2-201ENST00000312960 MYL6BP14649 208 aa27.38■■□□□ 1.97
SIAH2-201ENST00000312960 XAGE3Q8WTP9 111 aa27.38■■□□□ 1.97
SIAH2-201ENST00000312960 NEXNQ0ZGT2 675 aa27.38■■□□□ 1.97
SIAH2-201ENST00000312960 GCKRQ14397 625 aa27.38■■□□□ 1.97
SIAH2-201ENST00000312960 ZNF496Q96IT1 587 aaPredicted RBP27.38■■□□□ 1.97
SIAH2-201ENST00000312960 COL18A1P39060 1754 aa27.37■■□□□ 1.97
SIAH2-201ENST00000312960 COPS6Q7L5N1 327 aa27.37■■□□□ 1.97
SIAH2-201ENST00000312960 METTL22Q9BUU2 404 aaPredicted RBP27.37■■□□□ 1.97
SIAH2-201ENST00000312960 ABCC6O95255 1503 aa27.37■■□□□ 1.97
SIAH2-201ENST00000312960 LRSAM1Q6UWE0 723 aa27.36■■□□□ 1.97
SIAH2-201ENST00000312960 BRINP3Q76B58 766 aa27.36■■□□□ 1.97
SIAH2-201ENST00000312960 LRP10Q7Z4F1 713 aa27.36■■□□□ 1.97
SIAH2-201ENST00000312960 RPAP1Q9BWH6 1393 aaPredicted RBP27.36■■□□□ 1.97
SIAH2-201ENST00000312960 CASTP20810 708 aaKnown RBP27.36■■□□□ 1.97
SIAH2-201ENST00000312960 TM6SF1Q9BZW5 370 aa27.36■■□□□ 1.97
SIAH2-201ENST00000312960 CCDC8Q9H0W5 538 aaPredicted RBP27.35■■□□□ 1.97
SIAH2-201ENST00000312960 NECTIN1Q15223 517 aa27.35■■□□□ 1.97
SIAH2-201ENST00000312960 PLEKHG2Q9H7P9 1386 aa27.34■■□□□ 1.97
SIAH2-201ENST00000312960 HIP1O00291 1037 aa27.34■■□□□ 1.97
SIAH2-201ENST00000312960 PRPF40BQ6NWY9 871 aaKnown RBP27.34■■□□□ 1.97
SIAH2-201ENST00000312960 DCAF5Q96JK2 942 aa27.34■■□□□ 1.97
SIAH2-201ENST00000312960 MYD88Q99836 296 aa27.34■■□□□ 1.97
SIAH2-201ENST00000312960 ZSWIM6Q9HCJ5 1215 aa27.34■■□□□ 1.97
SIAH2-201ENST00000312960 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.34■■□□□ 1.97
SIAH2-201ENST00000312960 SNRPA1P09661 255 aaKnown RBP27.33■■□□□ 1.97
SIAH2-201ENST00000312960 CPA1P15085 419 aa27.33■■□□□ 1.97
SIAH2-201ENST00000312960 EPHA10Q5JZY3 1008 aa27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms