RNA–Protein interactions for RNA: ENST00000311550.9

GABRB3-202, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRB3, Length 5,781 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-202ENST00000311550 FSIP1Q8NA03 581 aa20.15■□□□□ 0.82
GABRB3-202ENST00000311550 NEK1Q96PY6 1258 aa20.15■□□□□ 0.82
GABRB3-202ENST00000311550 GOLGA8BA8MQT2 603 aa20.14■□□□□ 0.82
GABRB3-202ENST00000311550 PRIM1P49642 420 aaKnown RBP20.14■□□□□ 0.82
GABRB3-202ENST00000311550 CCDC43Q96MW1 224 aaKnown RBP20.14■□□□□ 0.82
GABRB3-202ENST00000311550 LRRC2Q9BYS8 371 aa20.14■□□□□ 0.82
GABRB3-202ENST00000311550 PIP4K2AP48426 406 aaPredicted RBP20.14■□□□□ 0.81
GABRB3-202ENST00000311550 C16orf45Q96MC5 204 aaPredicted RBP20.14■□□□□ 0.81
GABRB3-202ENST00000311550 NUTM2BA6NNL0 878 aaPredicted RBP20.14■□□□□ 0.81
GABRB3-202ENST00000311550 NUTM2EB1AL46 878 aaPredicted RBP20.14■□□□□ 0.81
GABRB3-202ENST00000311550 ATP2B2Q01814 1243 aa20.14■□□□□ 0.81
GABRB3-202ENST00000311550 NUTM2AQ8IVF1 878 aaPredicted RBP20.14■□□□□ 0.81
GABRB3-202ENST00000311550 DDX19AQ9NUU7 478 aaKnown RBP20.14■□□□□ 0.81
GABRB3-202ENST00000311550 SFPQP23246 707 aaKnown RBP eCLIP20.14■□□□□ 0.81
GABRB3-202ENST00000311550 PTPN14Q15678 1187 aa20.14■□□□□ 0.81
GABRB3-202ENST00000311550 MINDY4BA8MYZ0 360 aa20.14■□□□□ 0.81
GABRB3-202ENST00000311550 SLC39A6Q13433 755 aa20.14■□□□□ 0.81
GABRB3-202ENST00000311550 DHX8Q14562 1220 aaKnown RBP20.14■□□□□ 0.81
GABRB3-202ENST00000311550 ZNF213O14771 459 aa20.13■□□□□ 0.81
GABRB3-202ENST00000311550 BIN1O00499 593 aa20.13■□□□□ 0.81
GABRB3-202ENST00000311550 G2E3Q7L622 706 aa20.13■□□□□ 0.81
GABRB3-202ENST00000311550 KRT28Q7Z3Y7 464 aa20.13■□□□□ 0.81
GABRB3-202ENST00000311550 USP26Q9BXU7 913 aa20.13■□□□□ 0.81
GABRB3-202ENST00000311550 RBM8AQ9Y5S9 174 aaKnown RBP20.13■□□□□ 0.81
GABRB3-202ENST00000311550 TTC21AQ8NDW8 1320 aa20.13■□□□□ 0.81
GABRB3-202ENST00000311550 GPTP24298 496 aa20.13■□□□□ 0.81
GABRB3-202ENST00000311550 CLCN1P35523 988 aa20.13■□□□□ 0.81
GABRB3-202ENST00000311550 IGHMBP2P38935 993 aaKnown RBP20.13■□□□□ 0.81
GABRB3-202ENST00000311550 NAPBQ9H115 298 aa20.13■□□□□ 0.81
GABRB3-202ENST00000311550 TRMT1Q9NXH9 659 aaKnown RBP20.13■□□□□ 0.81
GABRB3-202ENST00000311550 MSH6P52701 1360 aa20.12■□□□□ 0.81
GABRB3-202ENST00000311550 ANAPC15P60006 121 aa20.12■□□□□ 0.81
GABRB3-202ENST00000311550 SETQ01105 290 aaPredicted RBP20.12■□□□□ 0.81
GABRB3-202ENST00000311550 PBRM1Q86U86 1689 aa20.12■□□□□ 0.81
GABRB3-202ENST00000311550 BRF1Q92994 677 aa20.12■□□□□ 0.81
GABRB3-202ENST00000311550 WASF1Q92558 559 aa20.12■□□□□ 0.81
GABRB3-202ENST00000311550 UHRF1BP1LA0JNW5 1464 aa20.12■□□□□ 0.81
GABRB3-202ENST00000311550 ZNF165P49910 485 aa20.12■□□□□ 0.81
GABRB3-202ENST00000311550 CHRNA2Q15822 529 aa20.12■□□□□ 0.81
GABRB3-202ENST00000311550 EYA1Q99502 592 aa20.11■□□□□ 0.81
GABRB3-202ENST00000311550 ZNHIT6Q9NWK9 470 aaKnown RBP20.11■□□□□ 0.81
GABRB3-202ENST00000311550 ZFYVE9O95405 1425 aa20.11■□□□□ 0.81
GABRB3-202ENST00000311550 POLR3DP05423 398 aaPredicted RBP20.11■□□□□ 0.81
GABRB3-202ENST00000311550 YTHDC2Q9H6S0 1430 aaKnown RBP20.11■□□□□ 0.81
GABRB3-202ENST00000311550 ANKRD13DQ6ZTN6 518 aa20.11■□□□□ 0.81
GABRB3-202ENST00000311550 PRDM10Q9NQV6 1147 aa20.11■□□□□ 0.81
GABRB3-202ENST00000311550 IFNL2Q8IZJ0 200 aa20.1■□□□□ 0.81
GABRB3-202ENST00000311550 XAGE3Q8WTP9 111 aa20.1■□□□□ 0.81
GABRB3-202ENST00000311550 LRRC59Q96AG4 307 aaKnown RBP20.1■□□□□ 0.81
GABRB3-202ENST00000311550 KLHL10Q6JEL2 608 aa20.1■□□□□ 0.81
GABRB3-202ENST00000311550 CCDC144CPQ8IYA2 1237 aa20.1■□□□□ 0.81
GABRB3-202ENST00000311550 CBX1P83916 185 aa20.1■□□□□ 0.81
GABRB3-202ENST00000311550 TNNT1P13805 278 aa20.1■□□□□ 0.81
GABRB3-202ENST00000311550 DNM1Q05193 864 aaKnown RBP20.1■□□□□ 0.81
GABRB3-202ENST00000311550 ERCC4Q92889 916 aaPredicted RBP20.1■□□□□ 0.81
GABRB3-202ENST00000311550 TRMT112Q9UI30 125 aaKnown RBP20.1■□□□□ 0.81
GABRB3-202ENST00000311550 COPS6Q7L5N1 327 aa20.09■□□□□ 0.81
GABRB3-202ENST00000311550 CCAR1Q8IX12 1150 aaKnown RBP20.09■□□□□ 0.81
GABRB3-202ENST00000311550 PHAXQ9H814 394 aaKnown RBP20.09■□□□□ 0.81
GABRB3-202ENST00000311550 STIM1Q13586 685 aa20.09■□□□□ 0.81
GABRB3-202ENST00000311550 KRT18P05783 430 aaKnown RBP20.09■□□□□ 0.81
GABRB3-202ENST00000311550 RBM25P49756 843 aaKnown RBP20.09■□□□□ 0.81
GABRB3-202ENST00000311550 USP16Q9Y5T5 823 aa20.09■□□□□ 0.81
GABRB3-202ENST00000311550 SKIDA1Q1XH10 827 aa20.09■□□□□ 0.81
GABRB3-202ENST00000311550 GRM8O00222 908 aa20.08■□□□□ 0.81
GABRB3-202ENST00000311550 PTPRTO14522 1441 aa20.08■□□□□ 0.81
GABRB3-202ENST00000311550 IL13P35225 146 aa20.08■□□□□ 0.81
GABRB3-202ENST00000311550 CWF19L2Q2TBE0 894 aaKnown RBP20.08■□□□□ 0.81
GABRB3-202ENST00000311550 ISM2Q6H9L7 571 aa20.08■□□□□ 0.81
GABRB3-202ENST00000311550 PATL2C9JE40 543 aaKnown RBP20.08■□□□□ 0.81
GABRB3-202ENST00000311550 CHMLP26374 656 aa20.08■□□□□ 0.81
GABRB3-202ENST00000311550 ZHX3Q9H4I2 956 aa20.08■□□□□ 0.8
GABRB3-202ENST00000311550 CWC25Q9NXE8 425 aaPredicted RBP20.08■□□□□ 0.8
GABRB3-202ENST00000311550 HMG20BQ9P0W2 317 aa20.08■□□□□ 0.8
GABRB3-202ENST00000311550 CTAGE5O15320 804 aa20.08■□□□□ 0.8
GABRB3-202ENST00000311550 AK2P54819 239 aa20.08■□□□□ 0.8
GABRB3-202ENST00000311550 FLT4P35916 1363 aa20.08■□□□□ 0.8
GABRB3-202ENST00000311550 UBXN4Q92575 508 aa20.07■□□□□ 0.8
GABRB3-202ENST00000311550 CCDC66A2RUB6 948 aa20.07■□□□□ 0.8
GABRB3-202ENST00000311550 MCM5P33992 734 aa20.07■□□□□ 0.8
GABRB3-202ENST00000311550 F13A1P00488 732 aa20.07■□□□□ 0.8
GABRB3-202ENST00000311550 SNRPA1P09661 255 aaKnown RBP20.07■□□□□ 0.8
GABRB3-202ENST00000311550 KSR2Q6VAB6 950 aa20.07■□□□□ 0.8
GABRB3-202ENST00000311550 PKNOX2Q96KN3 472 aa20.07■□□□□ 0.8
GABRB3-202ENST00000311550 SLC12A7Q9Y666 1083 aa20.07■□□□□ 0.8
GABRB3-202ENST00000311550 MAP3K19Q56UN5 1328 aa20.07■□□□□ 0.8
GABRB3-202ENST00000311550 NMIQ13287 307 aaPredicted RBP20.06■□□□□ 0.8
GABRB3-202ENST00000311550 UVSSAQ2YD98 709 aa20.06■□□□□ 0.8
GABRB3-202ENST00000311550 SOGA3Q5TF21 947 aa20.06■□□□□ 0.8
GABRB3-202ENST00000311550 ORC3Q9UBD5 711 aaPredicted RBP20.06■□□□□ 0.8
GABRB3-202ENST00000311550 GOLGA8AA7E2F4 631 aa20.06■□□□□ 0.8
GABRB3-202ENST00000311550 IFIT3O14879 490 aaKnown RBP20.06■□□□□ 0.8
GABRB3-202ENST00000311550 TANGO6Q9C0B7 1094 aa20.06■□□□□ 0.8
GABRB3-202ENST00000311550 DEF6Q9H4E7 631 aa20.06■□□□□ 0.8
GABRB3-202ENST00000311550 MAGI2Q86UL8 1455 aa20.06■□□□□ 0.8
GABRB3-202ENST00000311550 ABCC2Q92887 1545 aa20.06■□□□□ 0.8
GABRB3-202ENST00000311550 LDHAL6AQ6ZMR3 332 aa20.06■□□□□ 0.8
GABRB3-202ENST00000311550 INSRP06213 1382 aa20.05■□□□□ 0.8
GABRB3-202ENST00000311550 CPA1P15085 419 aa20.05■□□□□ 0.8
GABRB3-202ENST00000311550 MAP3K12Q12852 859 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms