RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 TBC1D9BQ66K14 1250 aa23.04■■□□□ 1.28
CCS-201ENST00000310190 TSR2Q969E8 191 aaKnown RBP23.04■■□□□ 1.28
CCS-201ENST00000310190 SPINK5Q9NQ38 1064 aaPredicted RBP23.04■■□□□ 1.28
CCS-201ENST00000310190 GOLGA2Q08379 1002 aa23.03■■□□□ 1.28
CCS-201ENST00000310190 PROSER3Q2NL68 480 aa23.03■■□□□ 1.28
CCS-201ENST00000310190 ZNF330Q9Y3S2 320 aaPredicted RBP23.03■■□□□ 1.28
CCS-201ENST00000310190 MYL6BP14649 208 aa23.02■■□□□ 1.28
CCS-201ENST00000310190 CCDC30Q5VVM6 783 aa23.02■■□□□ 1.28
CCS-201ENST00000310190 GIGYF2Q6Y7W6 1299 aaKnown RBP23.02■■□□□ 1.28
CCS-201ENST00000310190 TTLL7Q6ZT98 887 aa23.02■■□□□ 1.28
CCS-201ENST00000310190 TSPYL6Q8N831 410 aa23.02■■□□□ 1.28
CCS-201ENST00000310190 CHPF2Q9P2E5 772 aa23.02■■□□□ 1.28
CCS-201ENST00000310190 IBTKQ9P2D0 1353 aaPredicted RBP23.01■■□□□ 1.27
CCS-201ENST00000310190 E9PSI1 815 aa23.01■■□□□ 1.27
CCS-201ENST00000310190 SERPINB2P05120 415 aa23.01■■□□□ 1.27
CCS-201ENST00000310190 KIF6Q6ZMV9 814 aa23.01■■□□□ 1.27
CCS-201ENST00000310190 TRMT2AQ8IZ69 625 aaKnown RBP23.01■■□□□ 1.27
CCS-201ENST00000310190 SETDB2Q96T68 719 aa23.01■■□□□ 1.27
CCS-201ENST00000310190 GOLGB1Q14789 3259 aaKnown RBP23■■□□□ 1.27
CCS-201ENST00000310190 HLFQ16534 295 aa23■■□□□ 1.27
CCS-201ENST00000310190 TWISTNBQ3B726 338 aaPredicted RBP23■■□□□ 1.27
CCS-201ENST00000310190 SALL2Q9Y467 1007 aaPredicted RBP23■■□□□ 1.27
CCS-201ENST00000310190 BRCA1P38398 1863 aaKnown RBP22.99■■□□□ 1.27
CCS-201ENST00000310190 VAMP4O75379 141 aa22.99■■□□□ 1.27
CCS-201ENST00000310190 COPS6Q7L5N1 327 aa22.99■■□□□ 1.27
CCS-201ENST00000310190 ZNF34Q8IZ26 560 aa22.99■■□□□ 1.27
CCS-201ENST00000310190 NLGN2Q8NFZ4 835 aa22.99■■□□□ 1.27
CCS-201ENST00000310190 PDZRN3Q9UPQ7 1066 aa22.99■■□□□ 1.27
CCS-201ENST00000310190 PXDNLA1KZ92 1463 aa22.98■■□□□ 1.27
CCS-201ENST00000310190 SENP3-EIF4A1A0A087X0R7 540 aa22.98■■□□□ 1.27
CCS-201ENST00000310190 SLFN5Q08AF3 891 aa22.98■■□□□ 1.27
CCS-201ENST00000310190 XAGE3Q8WTP9 111 aa22.98■■□□□ 1.27
CCS-201ENST00000310190 ANKRD36CQ5JPF3 1778 aa22.98■■□□□ 1.27
CCS-201ENST00000310190 ELL2O00472 640 aaPredicted RBP22.96■■□□□ 1.27
CCS-201ENST00000310190 ANXA1P04083 346 aa22.96■■□□□ 1.27
CCS-201ENST00000310190 HSP90AB3PQ58FF7 597 aa22.96■■□□□ 1.27
CCS-201ENST00000310190 PLBD2Q8NHP8 589 aa22.96■■□□□ 1.27
CCS-201ENST00000310190 NECTIN2Q92692 538 aa22.96■■□□□ 1.27
CCS-201ENST00000310190 RIC1Q4ADV7 1423 aa22.96■■□□□ 1.27
CCS-201ENST00000310190 EXOSC9Q06265 439 aaKnown RBP22.95■■□□□ 1.26
CCS-201ENST00000310190 PRR5LQ6MZQ0 368 aa22.95■■□□□ 1.26
CCS-201ENST00000310190 ANKRD31Q8N7Z5 1873 aa22.95■■□□□ 1.26
CCS-201ENST00000310190 BRIP1Q9BX63 1249 aa22.95■■□□□ 1.26
CCS-201ENST00000310190 NIP7Q9Y221 180 aaKnown RBP eCLIP22.95■■□□□ 1.26
CCS-201ENST00000310190 DLEC1Q9Y238 1755 aa22.95■■□□□ 1.26
CCS-201ENST00000310190 RNF123Q5XPI4 1314 aa22.94■■□□□ 1.26
CCS-201ENST00000310190 KLRG2A4D1S0 409 aaPredicted RBP22.94■■□□□ 1.26
CCS-201ENST00000310190 KCNA3P22001 575 aa22.94■■□□□ 1.26
CCS-201ENST00000310190 TRIM28Q13263 835 aaKnown RBP22.94■■□□□ 1.26
CCS-201ENST00000310190 PARP10Q53GL7 1025 aa22.94■■□□□ 1.26
CCS-201ENST00000310190 ANKRD13DQ6ZTN6 518 aa22.94■■□□□ 1.26
CCS-201ENST00000310190 ZNF428Q96B54 188 aa22.94■■□□□ 1.26
CCS-201ENST00000310190 TCIRG1Q13488 830 aa22.93■■□□□ 1.26
CCS-201ENST00000310190 TPTE2Q6XPS3 522 aa22.93■■□□□ 1.26
CCS-201ENST00000310190 ZBTB3Q9H5J0 574 aa22.93■■□□□ 1.26
CCS-201ENST00000310190 N4BP2Q86UW6 1770 aaPredicted RBP22.93■■□□□ 1.26
CCS-201ENST00000310190 UTRNP46939 3433 aa22.93■■□□□ 1.26
CCS-201ENST00000310190 BICDL1Q6ZP65 573 aa22.92■■□□□ 1.26
CCS-201ENST00000310190 CNBD1Q8NA66 436 aa22.92■■□□□ 1.26
CCS-201ENST00000310190 NYXQ9GZU5 481 aa22.92■■□□□ 1.26
CCS-201ENST00000310190 ARFGEF2Q9Y6D5 1785 aa22.91■■□□□ 1.26
CCS-201ENST00000310190 UBN2Q6ZU65 1347 aa22.91■■□□□ 1.26
CCS-201ENST00000310190 CT47B1P0C2W7 299 aaPredicted RBP22.91■■□□□ 1.26
CCS-201ENST00000310190 STK31Q9BXU1 1019 aa22.91■■□□□ 1.26
CCS-201ENST00000310190 DCAF8L1A6NGE4 600 aa22.9■■□□□ 1.26
CCS-201ENST00000310190 NBPF5PQ86XG9 351 aaPredicted RBP22.9■■□□□ 1.26
CCS-201ENST00000310190 KLHL34Q8N239 644 aa22.9■■□□□ 1.26
CCS-201ENST00000310190 ISCA1Q9BUE6 129 aa22.9■■□□□ 1.26
CCS-201ENST00000310190 ARFGEF1Q9Y6D6 1849 aa22.89■■□□□ 1.26
CCS-201ENST00000310190 PDE6BP35913 854 aa22.89■■□□□ 1.25
CCS-201ENST00000310190 AIMP1Q12904 312 aaKnown RBP22.89■■□□□ 1.25
CCS-201ENST00000310190 PHAXQ9H814 394 aaKnown RBP22.89■■□□□ 1.25
CCS-201ENST00000310190 DDX58O95786 925 aaKnown RBP22.88■■□□□ 1.25
CCS-201ENST00000310190 DPEP1P16444 411 aa22.88■■□□□ 1.25
CCS-201ENST00000310190 ST5P78524 1137 aa22.88■■□□□ 1.25
CCS-201ENST00000310190 GRIN3BO60391 1043 aa22.87■■□□□ 1.25
CCS-201ENST00000310190 NTSR2O95665 410 aa22.87■■□□□ 1.25
CCS-201ENST00000310190 SLC10A5Q5PT55 438 aa22.87■■□□□ 1.25
CCS-201ENST00000310190 PPP1R42Q7Z4L9 355 aa22.87■■□□□ 1.25
CCS-201ENST00000310190 A0A0G2JLW4 131 aa22.86■■□□□ 1.25
CCS-201ENST00000310190 SLC4A2P04920 1241 aa22.86■■□□□ 1.25
CCS-201ENST00000310190 KSR2Q6VAB6 950 aa22.86■■□□□ 1.25
CCS-201ENST00000310190 NLRP10Q86W26 655 aa22.86■■□□□ 1.25
CCS-201ENST00000310190 PIM2Q9P1W9 311 aa22.86■■□□□ 1.25
CCS-201ENST00000310190 CHD4Q14839 1912 aa22.85■■□□□ 1.25
CCS-201ENST00000310190 SUSD4Q5VX71 490 aa22.85■■□□□ 1.25
CCS-201ENST00000310190 CDCA7LQ96GN5 454 aa22.85■■□□□ 1.25
CCS-201ENST00000310190 H0YIN7 160 aa22.84■■□□□ 1.25
CCS-201ENST00000310190 YBX3P16989 372 aaKnown RBP eCLIP22.84■■□□□ 1.25
CCS-201ENST00000310190 CRY2Q49AN0 593 aa22.84■■□□□ 1.25
CCS-201ENST00000310190 METTL22Q9BUU2 404 aaPredicted RBP22.84■■□□□ 1.25
CCS-201ENST00000310190 ZBED9Q6R2W3 1325 aa22.83■■□□□ 1.25
CCS-201ENST00000310190 COL11A2P13942 1736 aaPredicted RBP22.83■■□□□ 1.25
CCS-201ENST00000310190 SRGNP10124 158 aa22.83■■□□□ 1.25
CCS-201ENST00000310190 GPTP24298 496 aa22.83■■□□□ 1.25
CCS-201ENST00000310190 FLIIQ13045 1269 aa22.83■■□□□ 1.25
CCS-201ENST00000310190 RIC3Q7Z5B4 369 aa22.83■■□□□ 1.25
CCS-201ENST00000310190 UTP14AQ9BVJ6 771 aaKnown RBP22.83■■□□□ 1.25
CCS-201ENST00000310190 ADCY9O60503 1353 aa22.83■■□□□ 1.25
CCS-201ENST00000310190 GPR162Q16538 588 aa22.82■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms