RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 ZBTB1Q9Y2K1 713 aa28.19■■■□□ 2.1
IRF3-201ENST00000309877 LRRFIP2Q9Y608 721 aaKnown RBP28.19■■■□□ 2.1
IRF3-201ENST00000309877 ITPK1Q13572 414 aa28.19■■■□□ 2.1
IRF3-201ENST00000309877 FAM196AQ6ZSG2 479 aa28.19■■■□□ 2.1
IRF3-201ENST00000309877 SMC5Q8IY18 1101 aa28.19■■■□□ 2.1
IRF3-201ENST00000309877 HDAC5Q9UQL6 1122 aa28.19■■■□□ 2.1
IRF3-201ENST00000309877 NEURL1BA8MQ27 555 aa28.18■■■□□ 2.1
IRF3-201ENST00000309877 HMMRO75330 724 aa28.18■■■□□ 2.1
IRF3-201ENST00000309877 NBPF7P0C2Y1 421 aaPredicted RBP28.18■■■□□ 2.1
IRF3-201ENST00000309877 RXRBP28702 533 aa28.18■■■□□ 2.1
IRF3-201ENST00000309877 GCC1Q96CN9 775 aa28.18■■■□□ 2.1
IRF3-201ENST00000309877 ARXQ96QS3 562 aa28.18■■■□□ 2.1
IRF3-201ENST00000309877 ZBTB3Q9H5J0 574 aa28.18■■■□□ 2.1
IRF3-201ENST00000309877 CCDC87Q9NVE4 849 aa28.18■■■□□ 2.1
IRF3-201ENST00000309877 SKAP1Q86WV1 359 aa28.17■■■□□ 2.1
IRF3-201ENST00000309877 PDZRN3Q9UPQ7 1066 aa28.17■■■□□ 2.1
IRF3-201ENST00000309877 IL6STP40189 918 aaPredicted RBP28.16■■■□□ 2.1
IRF3-201ENST00000309877 CRKLP46109 303 aaKnown RBP28.16■■■□□ 2.1
IRF3-201ENST00000309877 GRM8O00222 908 aa28.16■■■□□ 2.1
IRF3-201ENST00000309877 BCL11BQ9C0K0 894 aaPredicted RBP28.16■■■□□ 2.1
IRF3-201ENST00000309877 IBTKQ9P2D0 1353 aaPredicted RBP28.16■■■□□ 2.1
IRF3-201ENST00000309877 INTS5Q6P9B9 1019 aaKnown RBP28.15■■■□□ 2.1
IRF3-201ENST00000309877 BTAF1O14981 1849 aa28.14■■■□□ 2.1
IRF3-201ENST00000309877 ATP5J2-PTCD1G3V325 749 aa28.14■■■□□ 2.1
IRF3-201ENST00000309877 GCKRQ14397 625 aa28.14■■■□□ 2.1
IRF3-201ENST00000309877 ARFGEF2Q9Y6D5 1785 aa28.14■■■□□ 2.09
IRF3-201ENST00000309877 ATP8B2P98198 1209 aa28.13■■■□□ 2.09
IRF3-201ENST00000309877 CICQ96RK0 1608 aaPredicted RBP28.13■■■□□ 2.09
IRF3-201ENST00000309877 RGS3P49796 1198 aa28.13■■■□□ 2.09
IRF3-201ENST00000309877 UTYO14607 1347 aa28.12■■■□□ 2.09
IRF3-201ENST00000309877 DCTPP1Q9H773 170 aa28.12■■■□□ 2.09
IRF3-201ENST00000309877 MAP3K15Q6ZN16 1313 aa28.11■■■□□ 2.09
IRF3-201ENST00000309877 BRWD3Q6RI45 1802 aa28.11■■■□□ 2.09
IRF3-201ENST00000309877 SBF2Q86WG5 1849 aa28.11■■■□□ 2.09
IRF3-201ENST00000309877 ZNF831Q5JPB2 1677 aa28.1■■■□□ 2.09
IRF3-201ENST00000309877 EIF5P55010 431 aaKnown RBP28.1■■■□□ 2.09
IRF3-201ENST00000309877 CCNL1Q9UK58 526 aaPredicted RBP28.1■■■□□ 2.09
IRF3-201ENST00000309877 NUCB1Q02818 461 aa28.09■■■□□ 2.09
IRF3-201ENST00000309877 DZIP3Q86Y13 1208 aaKnown RBP28.09■■■□□ 2.09
IRF3-201ENST00000309877 LINC00116Q8NCU8 138 aa28.09■■■□□ 2.09
IRF3-201ENST00000309877 NUP188Q5SRE5 1749 aa28.09■■■□□ 2.09
IRF3-201ENST00000309877 KCNQ4P56696 695 aa28.08■■■□□ 2.09
IRF3-201ENST00000309877 TCIRG1Q13488 830 aa28.08■■■□□ 2.09
IRF3-201ENST00000309877 ANKRD45Q5TZF3 282 aa28.08■■■□□ 2.09
IRF3-201ENST00000309877 CWC25Q9NXE8 425 aaPredicted RBP28.08■■■□□ 2.09
IRF3-201ENST00000309877 PNMA6EA0A0J9YXQ4 647 aa28.07■■■□□ 2.08
IRF3-201ENST00000309877 RGS17Q9UGC6 210 aaPredicted RBP28.07■■■□□ 2.08
IRF3-201ENST00000309877 A0A087WZG4 1122 aa28.07■■■□□ 2.08
IRF3-201ENST00000309877 GIGYF2Q6Y7W6 1299 aaKnown RBP28.07■■■□□ 2.08
IRF3-201ENST00000309877 CCDC191Q8NCU4 936 aa28.07■■■□□ 2.08
IRF3-201ENST00000309877 SUCLG2Q96I99 432 aa28.07■■■□□ 2.08
IRF3-201ENST00000309877 TBC1D2BQ9UPU7 963 aa28.07■■■□□ 2.08
IRF3-201ENST00000309877 ERVV-1B6SEH8 477 aa28.06■■■□□ 2.08
IRF3-201ENST00000309877 TRIM37O94972 964 aa28.06■■■□□ 2.08
IRF3-201ENST00000309877 HSP90AB3PQ58FF7 597 aa28.06■■■□□ 2.08
IRF3-201ENST00000309877 PPP1R42Q7Z4L9 355 aa28.06■■■□□ 2.08
IRF3-201ENST00000309877 CHD1LQ86WJ1 897 aa28.06■■■□□ 2.08
IRF3-201ENST00000309877 ISCA1Q9BUE6 129 aa28.05■■■□□ 2.08
IRF3-201ENST00000309877 ZBTB47Q9UFB7 747 aaPredicted RBP28.05■■■□□ 2.08
IRF3-201ENST00000309877 CNTNAP4Q9C0A0 1308 aa28.05■■■□□ 2.08
IRF3-201ENST00000309877 SRGAP3O43295 1099 aa28.04■■■□□ 2.08
IRF3-201ENST00000309877 RREB1Q92766 1687 aa28.04■■■□□ 2.08
IRF3-201ENST00000309877 HLFQ16534 295 aa28.03■■■□□ 2.08
IRF3-201ENST00000309877 RC3H1Q5TC82 1133 aaKnown RBP28.03■■■□□ 2.08
IRF3-201ENST00000309877 UBE3BQ7Z3V4 1068 aa28.03■■■□□ 2.08
IRF3-201ENST00000309877 SSH3Q8TE77 659 aa28.03■■■□□ 2.08
IRF3-201ENST00000309877 AFDNP55196 1824 aaKnown RBP28.03■■■□□ 2.08
IRF3-201ENST00000309877 COL5A3P25940 1745 aaPredicted RBP28.03■■■□□ 2.08
IRF3-201ENST00000309877 TRIM28Q13263 835 aaKnown RBP28.03■■■□□ 2.08
IRF3-201ENST00000309877 POTEAQ6S8J7 498 aa28.03■■■□□ 2.08
IRF3-201ENST00000309877 LNPKQ9C0E8 428 aa28.03■■■□□ 2.08
IRF3-201ENST00000309877 JARID2Q92833 1246 aaPredicted RBP28.02■■■□□ 2.08
IRF3-201ENST00000309877 H7C1W4 665 aa28.01■■■□□ 2.07
IRF3-201ENST00000309877 MTX1Q13505 466 aa28.01■■■□□ 2.07
IRF3-201ENST00000309877 POLA2Q14181 598 aa28.01■■■□□ 2.07
IRF3-201ENST00000309877 BICC1Q9H694 974 aaKnown RBP28.01■■■□□ 2.07
IRF3-201ENST00000309877 KAZALD1Q96I82 304 aa28■■■□□ 2.07
IRF3-201ENST00000309877 COL15A1P39059 1388 aa27.99■■■□□ 2.07
IRF3-201ENST00000309877 LY75O60449 1722 aa27.98■■■□□ 2.07
IRF3-201ENST00000309877 APBB1O00213 710 aa27.98■■■□□ 2.07
IRF3-201ENST00000309877 EXOC6BQ9Y2D4 811 aa27.98■■■□□ 2.07
IRF3-201ENST00000309877 MYH14Q7Z406 1995 aaKnown RBP27.98■■■□□ 2.07
IRF3-201ENST00000309877 PDE4AP27815 886 aa27.97■■■□□ 2.07
IRF3-201ENST00000309877 CASP7P55210 303 aa27.97■■■□□ 2.07
IRF3-201ENST00000309877 CAMTA2O94983 1202 aa27.97■■■□□ 2.07
IRF3-201ENST00000309877 GPTP24298 496 aa27.97■■■□□ 2.07
IRF3-201ENST00000309877 GNPATO15228 680 aa27.96■■■□□ 2.07
IRF3-201ENST00000309877 RPS6KA4O75676 772 aa27.96■■■□□ 2.07
IRF3-201ENST00000309877 SURF6O75683 361 aaKnown RBP27.95■■■□□ 2.07
IRF3-201ENST00000309877 RTL5Q5HYW3 569 aaPredicted RBP27.95■■■□□ 2.07
IRF3-201ENST00000309877 SLC27A3Q5K4L6 730 aa27.95■■■□□ 2.07
IRF3-201ENST00000309877 NLRP10Q86W26 655 aa27.95■■■□□ 2.07
IRF3-201ENST00000309877 EPHA10Q5JZY3 1008 aa27.94■■■□□ 2.06
IRF3-201ENST00000309877 PCCAP05165 728 aaPredicted RBP27.94■■■□□ 2.06
IRF3-201ENST00000309877 TSHZ2Q9NRE2 1034 aa27.94■■■□□ 2.06
IRF3-201ENST00000309877 ZNF652Q9Y2D9 606 aa27.94■■■□□ 2.06
IRF3-201ENST00000309877 RTCBQ9Y3I0 505 aaKnown RBP27.94■■■□□ 2.06
IRF3-201ENST00000309877 HSP90AB4PQ58FF6 505 aa27.93■■■□□ 2.06
IRF3-201ENST00000309877 ZNF34Q8IZ26 560 aa27.93■■■□□ 2.06
IRF3-201ENST00000309877 ZBTB38Q8NAP3 1195 aaPredicted RBP27.93■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms