RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 TCERG1O14776 1098 aaKnown RBP28.48■■■□□ 2.15
SNUPN-201ENST00000308588 TM4SF1P30408 202 aa28.48■■■□□ 2.15
SNUPN-201ENST00000308588 XAGE3Q8WTP9 111 aa28.48■■■□□ 2.15
SNUPN-201ENST00000308588 MAP3K15Q6ZN16 1313 aa28.47■■■□□ 2.15
SNUPN-201ENST00000308588 BCORQ6W2J9 1755 aa28.47■■■□□ 2.15
SNUPN-201ENST00000308588 ERVV-1B6SEH8 477 aa28.46■■■□□ 2.15
SNUPN-201ENST00000308588 AIMP1Q12904 312 aaKnown RBP28.46■■■□□ 2.15
SNUPN-201ENST00000308588 HLFQ16534 295 aa28.46■■■□□ 2.15
SNUPN-201ENST00000308588 KIF6Q6ZMV9 814 aa28.46■■■□□ 2.15
SNUPN-201ENST00000308588 RGL2O15211 777 aa28.45■■■□□ 2.15
SNUPN-201ENST00000308588 NFIXQ14938 502 aa28.45■■■□□ 2.15
SNUPN-201ENST00000308588 CLEC4GQ6UXB4 293 aa28.45■■■□□ 2.15
SNUPN-201ENST00000308588 TBC1D9BQ66K14 1250 aa28.44■■■□□ 2.14
SNUPN-201ENST00000308588 ZBTB3Q9H5J0 574 aa28.44■■■□□ 2.14
SNUPN-201ENST00000308588 PHAXQ9H814 394 aaKnown RBP28.44■■■□□ 2.14
SNUPN-201ENST00000308588 DDR1Q08345 913 aa28.43■■■□□ 2.14
SNUPN-201ENST00000308588 STK31Q9BXU1 1019 aa28.43■■■□□ 2.14
SNUPN-201ENST00000308588 PPP1R1BQ9UD71 204 aaPredicted RBP28.43■■■□□ 2.14
SNUPN-201ENST00000308588 ZNF652Q9Y2D9 606 aa28.43■■■□□ 2.14
SNUPN-201ENST00000308588 SLC4A2P04920 1241 aa28.42■■■□□ 2.14
SNUPN-201ENST00000308588 BICDL1Q6ZP65 573 aa28.42■■■□□ 2.14
SNUPN-201ENST00000308588 POLRMTO00411 1230 aaKnown RBP28.41■■■□□ 2.14
SNUPN-201ENST00000308588 PARP3Q9Y6F1 533 aa28.41■■■□□ 2.14
SNUPN-201ENST00000308588 GIGYF2Q6Y7W6 1299 aaKnown RBP28.39■■■□□ 2.14
SNUPN-201ENST00000308588 ANKRD13DQ6ZTN6 518 aa28.38■■■□□ 2.13
SNUPN-201ENST00000308588 G2E3Q7L622 706 aa28.38■■■□□ 2.13
SNUPN-201ENST00000308588 PLBD2Q8NHP8 589 aa28.38■■■□□ 2.13
SNUPN-201ENST00000308588 SETDB2Q96T68 719 aa28.38■■■□□ 2.13
SNUPN-201ENST00000308588 NUP98P52948 1817 aa28.38■■■□□ 2.13
SNUPN-201ENST00000308588 NIP7Q9Y221 180 aaKnown RBP eCLIP28.36■■■□□ 2.13
SNUPN-201ENST00000308588 SERPINB2P05120 415 aa28.35■■■□□ 2.13
SNUPN-201ENST00000308588 CT47B1P0C2W7 299 aaPredicted RBP28.35■■■□□ 2.13
SNUPN-201ENST00000308588 ZNF428Q96B54 188 aa28.35■■■□□ 2.13
SNUPN-201ENST00000308588 FHDC1Q9C0D6 1143 aaPredicted RBP28.35■■■□□ 2.13
SNUPN-201ENST00000308588 ATP10DQ9P241 1426 aa28.34■■■□□ 2.13
SNUPN-201ENST00000308588 CACNA1FO60840 1977 aa28.34■■■□□ 2.13
SNUPN-201ENST00000308588 CARMIL3Q8ND23 1372 aa28.34■■■□□ 2.13
SNUPN-201ENST00000308588 ZNF34Q8IZ26 560 aa28.33■■■□□ 2.13
SNUPN-201ENST00000308588 FLIIQ13045 1269 aa28.33■■■□□ 2.13
SNUPN-201ENST00000308588 SSH1Q8WYL5 1049 aa28.33■■■□□ 2.13
SNUPN-201ENST00000308588 TCIRG1Q13488 830 aa28.32■■■□□ 2.12
SNUPN-201ENST00000308588 AFDNP55196 1824 aaKnown RBP28.31■■■□□ 2.12
SNUPN-201ENST00000308588 UBN2Q6ZU65 1347 aa28.31■■■□□ 2.12
SNUPN-201ENST00000308588 DDX58O95786 925 aaKnown RBP28.31■■■□□ 2.12
SNUPN-201ENST00000308588 GPTP24298 496 aa28.31■■■□□ 2.12
SNUPN-201ENST00000308588 RIC3Q7Z5B4 369 aa28.31■■■□□ 2.12
SNUPN-201ENST00000308588 KLHL34Q8N239 644 aa28.31■■■□□ 2.12
SNUPN-201ENST00000308588 SYT17Q9BSW7 474 aa28.31■■■□□ 2.12
SNUPN-201ENST00000308588 NRXN2Q9P2S2 1712 aa28.31■■■□□ 2.12
SNUPN-201ENST00000308588 HSP90AB3PQ58FF7 597 aa28.3■■■□□ 2.12
SNUPN-201ENST00000308588 MRPL50Q8N5N7 158 aaKnown RBP28.3■■■□□ 2.12
SNUPN-201ENST00000308588 CD2APQ9Y5K6 639 aa28.3■■■□□ 2.12
SNUPN-201ENST00000308588 ALDH1L2Q3SY69 923 aa28.29■■■□□ 2.12
SNUPN-201ENST00000308588 KSR2Q6VAB6 950 aa28.29■■■□□ 2.12
SNUPN-201ENST00000308588 PI4KAP2A4QPH2 592 aa28.28■■■□□ 2.12
SNUPN-201ENST00000308588 C10orf71Q711Q0 1435 aa28.28■■■□□ 2.12
SNUPN-201ENST00000308588 PI4KAP1Q8N8J0 262 aa28.28■■■□□ 2.12
SNUPN-201ENST00000308588 YTHDC1Q96MU7 727 aaKnown RBP28.28■■■□□ 2.12
SNUPN-201ENST00000308588 ADCY9O60503 1353 aa28.28■■■□□ 2.12
SNUPN-201ENST00000308588 ARFGEF2Q9Y6D5 1785 aa28.28■■■□□ 2.12
SNUPN-201ENST00000308588 PRR5LQ6MZQ0 368 aa28.28■■■□□ 2.12
SNUPN-201ENST00000308588 BCL2L13Q9BXK5 485 aa28.28■■■□□ 2.12
SNUPN-201ENST00000308588 MAP3K2Q9Y2U5 619 aa28.28■■■□□ 2.12
SNUPN-201ENST00000308588 FKBP5Q13451 457 aaPredicted RBP28.27■■■□□ 2.12
SNUPN-201ENST00000308588 NBPF5PQ86XG9 351 aaPredicted RBP28.27■■■□□ 2.12
SNUPN-201ENST00000308588 FAM177BA6PVY3 158 aa28.26■■■□□ 2.11
SNUPN-201ENST00000308588 SUSD4Q5VX71 490 aa28.26■■■□□ 2.11
SNUPN-201ENST00000308588 ISCA1Q9BUE6 129 aa28.26■■■□□ 2.11
SNUPN-201ENST00000308588 ANKRD36CQ5JPF3 1778 aa28.26■■■□□ 2.11
SNUPN-201ENST00000308588 RARSP54136 660 aaKnown RBP28.25■■■□□ 2.11
SNUPN-201ENST00000308588 PARP10Q53GL7 1025 aa28.25■■■□□ 2.11
SNUPN-201ENST00000308588 NLRP10Q86W26 655 aa28.25■■■□□ 2.11
SNUPN-201ENST00000308588 CNBD1Q8NA66 436 aa28.25■■■□□ 2.11
SNUPN-201ENST00000308588 NLGN2Q8NFZ4 835 aa28.25■■■□□ 2.11
SNUPN-201ENST00000308588 METTL22Q9BUU2 404 aaPredicted RBP28.25■■■□□ 2.11
SNUPN-201ENST00000308588 KIF13BQ9NQT8 1826 aa28.25■■■□□ 2.11
SNUPN-201ENST00000308588 ATP5J2-PTCD1G3V325 749 aa28.24■■■□□ 2.11
SNUPN-201ENST00000308588 TPTE2Q6XPS3 522 aa28.24■■■□□ 2.11
SNUPN-201ENST00000308588 CCDC24Q8N4L8 307 aa28.24■■■□□ 2.11
SNUPN-201ENST00000308588 SMC4Q9NTJ3 1288 aa28.24■■■□□ 2.11
SNUPN-201ENST00000308588 MYD88Q99836 296 aa28.23■■■□□ 2.11
SNUPN-201ENST00000308588 TRIM28Q13263 835 aaKnown RBP28.23■■■□□ 2.11
SNUPN-201ENST00000308588 NTSR2O95665 410 aa28.22■■■□□ 2.11
SNUPN-201ENST00000308588 NYXQ9GZU5 481 aa28.22■■■□□ 2.11
SNUPN-201ENST00000308588 IBTKQ9P2D0 1353 aaPredicted RBP28.21■■■□□ 2.11
SNUPN-201ENST00000308588 NPHP1O15259 732 aa28.21■■■□□ 2.11
SNUPN-201ENST00000308588 BRPF1P55201 1214 aaPredicted RBP28.21■■■□□ 2.11
SNUPN-201ENST00000308588 PPP1R42Q7Z4L9 355 aa28.21■■■□□ 2.11
SNUPN-201ENST00000308588 DNAAF4Q8WXU2 420 aa28.21■■■□□ 2.11
SNUPN-201ENST00000308588 F6X3S4 739 aa28.2■■■□□ 2.1
SNUPN-201ENST00000308588 TGFB2P61812 414 aa28.2■■■□□ 2.1
SNUPN-201ENST00000308588 NUTM1Q86Y26 1132 aa28.2■■■□□ 2.1
SNUPN-201ENST00000308588 UTP14AQ9BVJ6 771 aaKnown RBP28.2■■■□□ 2.1
SNUPN-201ENST00000308588 ST5P78524 1137 aa28.19■■■□□ 2.1
SNUPN-201ENST00000308588 BRIP1Q9BX63 1249 aa28.19■■■□□ 2.1
SNUPN-201ENST00000308588 IGKV5-2P06315 115 aa28.18■■■□□ 2.1
SNUPN-201ENST00000308588 PXDNLA1KZ92 1463 aa28.18■■■□□ 2.1
SNUPN-201ENST00000308588 GTF2E1P29083 439 aaPredicted RBP28.18■■■□□ 2.1
SNUPN-201ENST00000308588 ERFEQ4G0M1 354 aa28.18■■■□□ 2.1
SNUPN-201ENST00000308588 PTPRCP08575 1304 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms