RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 TTLL7Q6ZT98 887 aa26.04■■□□□ 1.76
PDZRN3-202ENST00000308537 ARHGAP27Q6ZUM4 889 aa26.04■■□□□ 1.76
PDZRN3-202ENST00000308537 C2CD5Q86YS7 1000 aa26.04■■□□□ 1.76
PDZRN3-202ENST00000308537 ERBB4Q15303 1308 aa26.03■■□□□ 1.76
PDZRN3-202ENST00000308537 ARFGEF2Q9Y6D5 1785 aa26.02■■□□□ 1.76
PDZRN3-202ENST00000308537 KRT24Q2M2I5 525 aa26.02■■□□□ 1.76
PDZRN3-202ENST00000308537 CNBD1Q8NA66 436 aa26.02■■□□□ 1.76
PDZRN3-202ENST00000308537 ZNF652Q9Y2D9 606 aa26.01■■□□□ 1.75
PDZRN3-202ENST00000308537 MAP3K15Q6ZN16 1313 aa26■■□□□ 1.75
PDZRN3-202ENST00000308537 ERVV-1B6SEH8 477 aa26■■□□□ 1.75
PDZRN3-202ENST00000308537 H0YIN7 160 aa26■■□□□ 1.75
PDZRN3-202ENST00000308537 PRELPP51888 382 aa26■■□□□ 1.75
PDZRN3-202ENST00000308537 PROSER3Q2NL68 480 aa26■■□□□ 1.75
PDZRN3-202ENST00000308537 NIP7Q9Y221 180 aaKnown RBP eCLIP26■■□□□ 1.75
PDZRN3-202ENST00000308537 SLX4Q8IY92 1834 aa26■■□□□ 1.75
PDZRN3-202ENST00000308537 TNRC6CQ9HCJ0 1690 aaKnown RBP25.99■■□□□ 1.75
PDZRN3-202ENST00000308537 APAF1O14727 1248 aa25.99■■□□□ 1.75
PDZRN3-202ENST00000308537 MYL6BP14649 208 aa25.99■■□□□ 1.75
PDZRN3-202ENST00000308537 TTLL6Q8N841 843 aa25.99■■□□□ 1.75
PDZRN3-202ENST00000308537 CACNA1SQ13698 1873 aa25.99■■□□□ 1.75
PDZRN3-202ENST00000308537 FER1L6Q2WGJ9 1857 aa25.99■■□□□ 1.75
PDZRN3-202ENST00000308537 KLRG2A4D1S0 409 aaPredicted RBP25.98■■□□□ 1.75
PDZRN3-202ENST00000308537 ZNF853P0CG23 659 aa25.98■■□□□ 1.75
PDZRN3-202ENST00000308537 PDE6BP35913 854 aa25.98■■□□□ 1.75
PDZRN3-202ENST00000308537 NGEFQ8N5V2 710 aa25.98■■□□□ 1.75
PDZRN3-202ENST00000308537 C1QTNF8P60827 252 aa25.97■■□□□ 1.75
PDZRN3-202ENST00000308537 PDZRN3Q9UPQ7 1066 aa25.97■■□□□ 1.75
PDZRN3-202ENST00000308537 CCDC88AQ3V6T2 1871 aa25.97■■□□□ 1.75
PDZRN3-202ENST00000308537 UBN2Q6ZU65 1347 aa25.96■■□□□ 1.75
PDZRN3-202ENST00000308537 ANXA1P04083 346 aa25.96■■□□□ 1.75
PDZRN3-202ENST00000308537 SRGNP10124 158 aa25.96■■□□□ 1.75
PDZRN3-202ENST00000308537 C9orf131Q5VYM1 1079 aa25.96■■□□□ 1.75
PDZRN3-202ENST00000308537 NBPF5PQ86XG9 351 aaPredicted RBP25.96■■□□□ 1.75
PDZRN3-202ENST00000308537 EIF2S2P20042 333 aaKnown RBP25.95■■□□□ 1.74
PDZRN3-202ENST00000308537 CFAP44Q96MT7 982 aa25.95■■□□□ 1.74
PDZRN3-202ENST00000308537 NFKBIEO00221 500 aa25.94■■□□□ 1.74
PDZRN3-202ENST00000308537 ST5P78524 1137 aa25.94■■□□□ 1.74
PDZRN3-202ENST00000308537 RASSF7Q02833 373 aa25.94■■□□□ 1.74
PDZRN3-202ENST00000308537 ZNF526Q8TF50 670 aaPredicted RBP25.94■■□□□ 1.74
PDZRN3-202ENST00000308537 GPBP1L1Q9HC44 474 aaPredicted RBP25.94■■□□□ 1.74
PDZRN3-202ENST00000308537 ABCC12Q96J65 1359 aa25.94■■□□□ 1.74
PDZRN3-202ENST00000308537 ANKRD36CQ5JPF3 1778 aa25.93■■□□□ 1.74
PDZRN3-202ENST00000308537 ZNF34Q8IZ26 560 aa25.93■■□□□ 1.74
PDZRN3-202ENST00000308537 ZBTB3Q9H5J0 574 aa25.93■■□□□ 1.74
PDZRN3-202ENST00000308537 KIF3CO14782 793 aa25.92■■□□□ 1.74
PDZRN3-202ENST00000308537 STYK1Q6J9G0 422 aa25.92■■□□□ 1.74
PDZRN3-202ENST00000308537 TPTE2Q6XPS3 522 aa25.92■■□□□ 1.74
PDZRN3-202ENST00000308537 GIGYF2Q6Y7W6 1299 aaKnown RBP25.92■■□□□ 1.74
PDZRN3-202ENST00000308537 MBIPQ9NS73 344 aa25.92■■□□□ 1.74
PDZRN3-202ENST00000308537 IBTKQ9P2D0 1353 aaPredicted RBP25.92■■□□□ 1.74
PDZRN3-202ENST00000308537 KIF6Q6ZMV9 814 aa25.91■■□□□ 1.74
PDZRN3-202ENST00000308537 ZNF622Q969S3 477 aaKnown RBP eCLIP25.91■■□□□ 1.74
PDZRN3-202ENST00000308537 LAS1LQ9Y4W2 734 aaKnown RBP25.91■■□□□ 1.74
PDZRN3-202ENST00000308537 C7orf43Q8WVR3 580 aa25.9■■□□□ 1.74
PDZRN3-202ENST00000308537 MASTLQ96GX5 879 aa25.9■■□□□ 1.74
PDZRN3-202ENST00000308537 DICER1Q9UPY3 1922 aaKnown RBP25.9■■□□□ 1.74
PDZRN3-202ENST00000308537 RIC1Q4ADV7 1423 aa25.89■■□□□ 1.74
PDZRN3-202ENST00000308537 FAM177BA6PVY3 158 aa25.89■■□□□ 1.74
PDZRN3-202ENST00000308537 HOXB7P09629 217 aa25.89■■□□□ 1.74
PDZRN3-202ENST00000308537 NECTIN2Q92692 538 aa25.89■■□□□ 1.74
PDZRN3-202ENST00000308537 RNF181Q9P0P0 153 aa25.89■■□□□ 1.74
PDZRN3-202ENST00000308537 TIAM2Q8IVF5 1701 aa25.88■■□□□ 1.73
PDZRN3-202ENST00000308537 GPTP24298 496 aa25.88■■□□□ 1.73
PDZRN3-202ENST00000308537 SUSD4Q5VX71 490 aa25.88■■□□□ 1.73
PDZRN3-202ENST00000308537 PRPF40BQ6NWY9 871 aaKnown RBP25.88■■□□□ 1.73
PDZRN3-202ENST00000308537 DDX21Q9NR30 783 aaKnown RBP eCLIP25.88■■□□□ 1.73
PDZRN3-202ENST00000308537 IFT57Q9NWB7 429 aa25.88■■□□□ 1.73
PDZRN3-202ENST00000308537 C21orf2O43822 256 aa25.87■■□□□ 1.73
PDZRN3-202ENST00000308537 NTSR2O95665 410 aa25.87■■□□□ 1.73
PDZRN3-202ENST00000308537 CRY2Q49AN0 593 aa25.87■■□□□ 1.73
PDZRN3-202ENST00000308537 NUTM1Q86Y26 1132 aa25.87■■□□□ 1.73
PDZRN3-202ENST00000308537 CNKSR1Q969H4 720 aa25.87■■□□□ 1.73
PDZRN3-202ENST00000308537 NPHP1O15259 732 aa25.86■■□□□ 1.73
PDZRN3-202ENST00000308537 ERFEQ4G0M1 354 aa25.86■■□□□ 1.73
PDZRN3-202ENST00000308537 COPS6Q7L5N1 327 aa25.86■■□□□ 1.73
PDZRN3-202ENST00000308537 XAGE3Q8WTP9 111 aa25.86■■□□□ 1.73
PDZRN3-202ENST00000308537 CHPF2Q9P2E5 772 aa25.86■■□□□ 1.73
PDZRN3-202ENST00000308537 SNED1Q8TER0 1413 aa25.86■■□□□ 1.73
PDZRN3-202ENST00000308537 NPR1P16066 1061 aa25.85■■□□□ 1.73
PDZRN3-202ENST00000308537 DUSP27Q5VZP5 1158 aa25.85■■□□□ 1.73
PDZRN3-202ENST00000308537 LMNB1P20700 586 aa25.84■■□□□ 1.73
PDZRN3-202ENST00000308537 NMRK2Q9NPI5 230 aa25.84■■□□□ 1.73
PDZRN3-202ENST00000308537 LTBP3Q9NS15 1303 aa25.84■■□□□ 1.73
PDZRN3-202ENST00000308537 HDGFL1Q5TGJ6 251 aa25.83■■□□□ 1.73
PDZRN3-202ENST00000308537 NYXQ9GZU5 481 aa25.83■■□□□ 1.73
PDZRN3-202ENST00000308537 ZNF219Q9P2Y4 722 aaPredicted RBP25.83■■□□□ 1.73
PDZRN3-202ENST00000308537 ZC3H4Q9UPT8 1303 aaKnown RBP25.83■■□□□ 1.73
PDZRN3-202ENST00000308537 ANP32CO43423 234 aa25.82■■□□□ 1.72
PDZRN3-202ENST00000308537 GNAI1P63096 354 aa25.82■■□□□ 1.72
PDZRN3-202ENST00000308537 CCDC27Q2M243 656 aa25.82■■□□□ 1.72
PDZRN3-202ENST00000308537 MRS2Q9HD23 443 aa25.82■■□□□ 1.72
PDZRN3-202ENST00000308537 LAMB2P55268 1798 aa25.82■■□□□ 1.72
PDZRN3-202ENST00000308537 CEP350Q5VT06 3117 aa25.81■■□□□ 1.72
PDZRN3-202ENST00000308537 C3orf67Q6ZVT6 689 aa25.81■■□□□ 1.72
PDZRN3-202ENST00000308537 SENP3-EIF4A1A0A087X0R7 540 aa25.8■■□□□ 1.72
PDZRN3-202ENST00000308537 AIMP1Q12904 312 aaKnown RBP25.8■■□□□ 1.72
PDZRN3-202ENST00000308537 PARP10Q53GL7 1025 aa25.8■■□□□ 1.72
PDZRN3-202ENST00000308537 OLFM4Q6UX06 510 aa25.79■■□□□ 1.72
PDZRN3-202ENST00000308537 C8orf58Q8NAV2 365 aa25.79■■□□□ 1.72
PDZRN3-202ENST00000308537 HOXA10P31260 410 aaPredicted RBP25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms