RNA–Protein interactions for RNA: ENST00000307305.12

PHTF2-203, Transcript of putative homeodomain transcription factor 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHTF2, Length 4,793 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-203ENST00000307305 SNX14Q9Y5W7 946 aa13.4□□□□□ -0.26
PHTF2-203ENST00000307305 POLR3DP05423 398 aaPredicted RBP13.4□□□□□ -0.26
PHTF2-203ENST00000307305 AK9Q5TCS8 1911 aa13.4□□□□□ -0.27
PHTF2-203ENST00000307305 SOS1Q07889 1333 aaPredicted RBP13.39□□□□□ -0.27
PHTF2-203ENST00000307305 GOLIM4O00461 696 aa13.39□□□□□ -0.27
PHTF2-203ENST00000307305 HSP90AB3PQ58FF7 597 aa13.39□□□□□ -0.27
PHTF2-203ENST00000307305 CCDC129Q6ZRS4 1044 aa13.39□□□□□ -0.27
PHTF2-203ENST00000307305 CLIP2Q9UDT6 1046 aa13.39□□□□□ -0.27
PHTF2-203ENST00000307305 TNNT1P13805 278 aa13.39□□□□□ -0.27
PHTF2-203ENST00000307305 STRN4Q9NRL3 753 aa13.39□□□□□ -0.27
PHTF2-203ENST00000307305 PHF8Q9UPP1 1060 aa13.39□□□□□ -0.27
PHTF2-203ENST00000307305 A0A087WZG4 1122 aa13.39□□□□□ -0.27
PHTF2-203ENST00000307305 BRPF1P55201 1214 aaPredicted RBP13.39□□□□□ -0.27
PHTF2-203ENST00000307305 BRD1O95696 1058 aa13.38□□□□□ -0.27
PHTF2-203ENST00000307305 YEATS2Q9ULM3 1422 aa13.38□□□□□ -0.27
PHTF2-203ENST00000307305 ERICH4A6NGS2 130 aa13.38□□□□□ -0.27
PHTF2-203ENST00000307305 PTH1RQ03431 593 aa13.38□□□□□ -0.27
PHTF2-203ENST00000307305 CHRNA2Q15822 529 aa13.38□□□□□ -0.27
PHTF2-203ENST00000307305 IL17REQ8NFR9 667 aa13.38□□□□□ -0.27
PHTF2-203ENST00000307305 ZBTB3Q9H5J0 574 aa13.38□□□□□ -0.27
PHTF2-203ENST00000307305 PIK3R4Q99570 1358 aa13.38□□□□□ -0.27
PHTF2-203ENST00000307305 HIP1O00291 1037 aa13.38□□□□□ -0.27
PHTF2-203ENST00000307305 CCDC144CPQ8IYA2 1237 aa13.38□□□□□ -0.27
PHTF2-203ENST00000307305 THEMISQ8N1K5 641 aaPredicted RBP13.37□□□□□ -0.27
PHTF2-203ENST00000307305 IQGAP3Q86VI3 1631 aa13.37□□□□□ -0.27
PHTF2-203ENST00000307305 A0A087WWV3 80 aa13.37□□□□□ -0.27
PHTF2-203ENST00000307305 EVA1CP58658 441 aa13.37□□□□□ -0.27
PHTF2-203ENST00000307305 ANKRD1Q15327 319 aa13.37□□□□□ -0.27
PHTF2-203ENST00000307305 SKIDA1Q1XH10 827 aa13.37□□□□□ -0.27
PHTF2-203ENST00000307305 COPS6Q7L5N1 327 aa13.37□□□□□ -0.27
PHTF2-203ENST00000307305 SETD1BQ9UPS6 1966 aaKnown RBP13.37□□□□□ -0.27
PHTF2-203ENST00000307305 PROSER2Q86WR7 435 aaPredicted RBP13.37□□□□□ -0.27
PHTF2-203ENST00000307305 EVI5LQ96CN4 794 aa13.37□□□□□ -0.27
PHTF2-203ENST00000307305 TRERF1Q96PN7 1200 aa13.37□□□□□ -0.27
PHTF2-203ENST00000307305 MADDQ8WXG6 1647 aa13.37□□□□□ -0.27
PHTF2-203ENST00000307305 ZNF853P0CG23 659 aa13.37□□□□□ -0.27
PHTF2-203ENST00000307305 ANAPC15P60006 121 aa13.37□□□□□ -0.27
PHTF2-203ENST00000307305 TRIM29Q14134 588 aa13.37□□□□□ -0.27
PHTF2-203ENST00000307305 ZDHHC9Q9Y397 364 aa13.37□□□□□ -0.27
PHTF2-203ENST00000307305 ZFYVE9O95405 1425 aa13.36□□□□□ -0.27
PHTF2-203ENST00000307305 ADCK5Q3MIX3 580 aa13.36□□□□□ -0.27
PHTF2-203ENST00000307305 MTERF4Q7Z6M4 381 aaKnown RBP13.36□□□□□ -0.27
PHTF2-203ENST00000307305 PPP1R9BQ96SB3 815 aa13.36□□□□□ -0.27
PHTF2-203ENST00000307305 SH2B1Q9NRF2 756 aaPredicted RBP13.36□□□□□ -0.27
PHTF2-203ENST00000307305 SGSM2O43147 1006 aa13.36□□□□□ -0.27
PHTF2-203ENST00000307305 CABP4P57796 275 aa13.36□□□□□ -0.27
PHTF2-203ENST00000307305 CREB3L3Q68CJ9 461 aa13.36□□□□□ -0.27
PHTF2-203ENST00000307305 CPLX2Q6PUV4 134 aaKnown RBP13.36□□□□□ -0.27
PHTF2-203ENST00000307305 MNS1Q8NEH6 495 aa13.36□□□□□ -0.27
PHTF2-203ENST00000307305 XAGE3Q8WTP9 111 aa13.36□□□□□ -0.27
PHTF2-203ENST00000307305 PIBF1Q8WXW3 757 aa13.36□□□□□ -0.27
PHTF2-203ENST00000307305 LARP1Q6PKG0 1096 aaKnown RBP13.36□□□□□ -0.27
PHTF2-203ENST00000307305 SCAND2PQ9GZW5 306 aaPredicted RBP13.36□□□□□ -0.27
PHTF2-203ENST00000307305 TATP17735 454 aaPredicted RBP13.35□□□□□ -0.27
PHTF2-203ENST00000307305 DYNC1I1O14576 645 aa13.35□□□□□ -0.27
PHTF2-203ENST00000307305 SERPINC1P01008 464 aa13.35□□□□□ -0.27
PHTF2-203ENST00000307305 TYRO3Q06418 890 aa13.35□□□□□ -0.27
PHTF2-203ENST00000307305 FSIP1Q8NA03 581 aa13.35□□□□□ -0.27
PHTF2-203ENST00000307305 METP08581 1390 aa13.35□□□□□ -0.27
PHTF2-203ENST00000307305 E9PCH4 1651 aa13.35□□□□□ -0.27
PHTF2-203ENST00000307305 BICC1Q9H694 974 aaKnown RBP13.35□□□□□ -0.27
PHTF2-203ENST00000307305 JAK2O60674 1132 aa13.34□□□□□ -0.27
PHTF2-203ENST00000307305 HOXC9P31274 260 aa13.34□□□□□ -0.27
PHTF2-203ENST00000307305 Q6ZUG5 572 aa13.34□□□□□ -0.27
PHTF2-203ENST00000307305 CDC37L1Q7L3B6 337 aa13.34□□□□□ -0.27
PHTF2-203ENST00000307305 CABLES1Q8TDN4 633 aa13.34□□□□□ -0.27
PHTF2-203ENST00000307305 NEK1Q96PY6 1258 aa13.34□□□□□ -0.27
PHTF2-203ENST00000307305 CFAP45Q9UL16 551 aa13.34□□□□□ -0.27
PHTF2-203ENST00000307305 PRR36Q9H6K5 1346 aa13.34□□□□□ -0.27
PHTF2-203ENST00000307305 IDH1O75874 414 aaKnown RBP13.34□□□□□ -0.27
PHTF2-203ENST00000307305 INTS4Q96HW7 963 aaKnown RBP13.34□□□□□ -0.27
PHTF2-203ENST00000307305 LARGE1O95461 756 aa13.34□□□□□ -0.27
PHTF2-203ENST00000307305 TTC39AQ5SRH9 613 aa13.34□□□□□ -0.27
PHTF2-203ENST00000307305 PRAMEF22A3QJZ6 481 aa13.33□□□□□ -0.27
PHTF2-203ENST00000307305 GRM8O00222 908 aa13.33□□□□□ -0.27
PHTF2-203ENST00000307305 KCNA6P17658 529 aa13.33□□□□□ -0.27
PHTF2-203ENST00000307305 GTF2E1P29083 439 aaPredicted RBP13.33□□□□□ -0.27
PHTF2-203ENST00000307305 OTUD7BQ6GQQ9 843 aa13.33□□□□□ -0.27
PHTF2-203ENST00000307305 RUFY3Q7L099 469 aa13.33□□□□□ -0.27
PHTF2-203ENST00000307305 CCAR1Q8IX12 1150 aaKnown RBP13.33□□□□□ -0.27
PHTF2-203ENST00000307305 LRMPQ12912 555 aa13.33□□□□□ -0.28
PHTF2-203ENST00000307305 NCOA5Q9HCD5 579 aaKnown RBP13.33□□□□□ -0.28
PHTF2-203ENST00000307305 LIG1P18858 919 aa13.33□□□□□ -0.28
PHTF2-203ENST00000307305 NAT10Q9H0A0 1025 aaKnown RBP13.33□□□□□ -0.28
PHTF2-203ENST00000307305 PTPN14Q15678 1187 aa13.33□□□□□ -0.28
PHTF2-203ENST00000307305 NFATC2IPQ8NCF5 419 aa13.33□□□□□ -0.28
PHTF2-203ENST00000307305 ZNF396Q96N95 335 aaPredicted RBP13.33□□□□□ -0.28
PHTF2-203ENST00000307305 TPM3P06753 285 aa13.32□□□□□ -0.28
PHTF2-203ENST00000307305 LTKP29376 864 aa13.32□□□□□ -0.28
PHTF2-203ENST00000307305 ME3Q16798 604 aa13.32□□□□□ -0.28
PHTF2-203ENST00000307305 CEP57L1Q8IYX8 460 aa13.32□□□□□ -0.28
PHTF2-203ENST00000307305 CEP126Q9P2H0 1117 aa13.32□□□□□ -0.28
PHTF2-203ENST00000307305 EDC4Q6P2E9 1401 aaKnown RBP13.32□□□□□ -0.28
PHTF2-203ENST00000307305 KIF1BO60333 1816 aa13.32□□□□□ -0.28
PHTF2-203ENST00000307305 IFIT1P09914 478 aaKnown RBP13.32□□□□□ -0.28
PHTF2-203ENST00000307305 HSPA4P34932 840 aa13.32□□□□□ -0.28
PHTF2-203ENST00000307305 TIMM10P62072 90 aa13.32□□□□□ -0.28
PHTF2-203ENST00000307305 AKAP17AQ02040 695 aaKnown RBP13.32□□□□□ -0.28
PHTF2-203ENST00000307305 APOBRQ0VD83 1088 aa13.32□□□□□ -0.28
PHTF2-203ENST00000307305 NBPF6Q5VWK0 638 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms