RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 NEURL1BA8MQ27 555 aa21.9■■□□□ 1.1
KRT28-201ENST00000306658 IGKV5-2P06315 115 aa21.9■■□□□ 1.1
KRT28-201ENST00000306658 NBPF7P0C2Y1 421 aaPredicted RBP21.9■■□□□ 1.1
KRT28-201ENST00000306658 NPM2Q86SE8 214 aaKnown RBP21.9■■□□□ 1.1
KRT28-201ENST00000306658 ZNF330Q9Y3S2 320 aaPredicted RBP21.9■■□□□ 1.1
KRT28-201ENST00000306658 NHSQ6T4R5 1651 aa21.9■■□□□ 1.1
KRT28-201ENST00000306658 ARFGEF2Q9Y6D5 1785 aa21.89■■□□□ 1.1
KRT28-201ENST00000306658 ATP8B2P98198 1209 aa21.89■■□□□ 1.1
KRT28-201ENST00000306658 KIF6Q6ZMV9 814 aa21.89■■□□□ 1.1
KRT28-201ENST00000306658 GRM8O00222 908 aa21.88■■□□□ 1.09
KRT28-201ENST00000306658 IL6STP40189 918 aaPredicted RBP21.88■■□□□ 1.09
KRT28-201ENST00000306658 KRT27Q7Z3Y8 459 aa21.88■■□□□ 1.09
KRT28-201ENST00000306658 SKAP1Q86WV1 359 aa21.88■■□□□ 1.09
KRT28-201ENST00000306658 DCTPP1Q9H773 170 aa21.88■■□□□ 1.09
KRT28-201ENST00000306658 CICQ96RK0 1608 aaPredicted RBP21.88■■□□□ 1.09
KRT28-201ENST00000306658 UTYO14607 1347 aa21.88■■□□□ 1.09
KRT28-201ENST00000306658 RGS3P49796 1198 aa21.88■■□□□ 1.09
KRT28-201ENST00000306658 GCKRQ14397 625 aa21.88■■□□□ 1.09
KRT28-201ENST00000306658 CCDC87Q9NVE4 849 aa21.88■■□□□ 1.09
KRT28-201ENST00000306658 ZBTB1Q9Y2K1 713 aa21.88■■□□□ 1.09
KRT28-201ENST00000306658 ZBTB3Q9H5J0 574 aa21.87■■□□□ 1.09
KRT28-201ENST00000306658 ZNF831Q5JPB2 1677 aa21.87■■□□□ 1.09
KRT28-201ENST00000306658 NUCB1Q02818 461 aa21.86■■□□□ 1.09
KRT28-201ENST00000306658 ITPK1Q13572 414 aa21.86■■□□□ 1.09
KRT28-201ENST00000306658 FAM196AQ6ZSG2 479 aa21.86■■□□□ 1.09
KRT28-201ENST00000306658 BTAF1O14981 1849 aa21.86■■□□□ 1.09
KRT28-201ENST00000306658 CRKLP46109 303 aaKnown RBP21.85■■□□□ 1.09
KRT28-201ENST00000306658 PTF1AQ7RTS3 328 aa21.85■■□□□ 1.09
KRT28-201ENST00000306658 SBF2Q86WG5 1849 aa21.85■■□□□ 1.09
KRT28-201ENST00000306658 NUP188Q5SRE5 1749 aa21.85■■□□□ 1.09
KRT28-201ENST00000306658 INTS5Q6P9B9 1019 aaKnown RBP21.85■■□□□ 1.09
KRT28-201ENST00000306658 ARXQ96QS3 562 aa21.85■■□□□ 1.09
KRT28-201ENST00000306658 BCL11BQ9C0K0 894 aaPredicted RBP21.85■■□□□ 1.09
KRT28-201ENST00000306658 ATP5J2-PTCD1G3V325 749 aa21.84■■□□□ 1.09
KRT28-201ENST00000306658 ANKRD45Q5TZF3 282 aa21.84■■□□□ 1.09
KRT28-201ENST00000306658 CHD1LQ86WJ1 897 aa21.84■■□□□ 1.09
KRT28-201ENST00000306658 MAP3K15Q6ZN16 1313 aa21.83■■□□□ 1.09
KRT28-201ENST00000306658 ZBTB47Q9UFB7 747 aaPredicted RBP21.83■■□□□ 1.09
KRT28-201ENST00000306658 RXRBP28702 533 aa21.82■■□□□ 1.08
KRT28-201ENST00000306658 EIF5P55010 431 aaKnown RBP21.82■■□□□ 1.08
KRT28-201ENST00000306658 TCIRG1Q13488 830 aa21.82■■□□□ 1.08
KRT28-201ENST00000306658 CCDC191Q8NCU4 936 aa21.82■■□□□ 1.08
KRT28-201ENST00000306658 AFDNP55196 1824 aaKnown RBP21.82■■□□□ 1.08
KRT28-201ENST00000306658 BRWD3Q6RI45 1802 aa21.82■■□□□ 1.08
KRT28-201ENST00000306658 PNMA6EA0A0J9YXQ4 647 aa21.82■■□□□ 1.08
KRT28-201ENST00000306658 PPP1R42Q7Z4L9 355 aa21.82■■□□□ 1.08
KRT28-201ENST00000306658 SSH3Q8TE77 659 aa21.82■■□□□ 1.08
KRT28-201ENST00000306658 CWC25Q9NXE8 425 aaPredicted RBP21.82■■□□□ 1.08
KRT28-201ENST00000306658 A0A087WZG4 1122 aa21.81■■□□□ 1.08
KRT28-201ENST00000306658 ERVV-1B6SEH8 477 aa21.81■■□□□ 1.08
KRT28-201ENST00000306658 MTX1Q13505 466 aa21.81■■□□□ 1.08
KRT28-201ENST00000306658 HSP90AB3PQ58FF7 597 aa21.81■■□□□ 1.08
KRT28-201ENST00000306658 GIGYF2Q6Y7W6 1299 aaKnown RBP21.81■■□□□ 1.08
KRT28-201ENST00000306658 DZIP3Q86Y13 1208 aaKnown RBP21.81■■□□□ 1.08
KRT28-201ENST00000306658 SRGAP3O43295 1099 aa21.79■■□□□ 1.08
KRT28-201ENST00000306658 TRIM28Q13263 835 aaKnown RBP21.79■■□□□ 1.08
KRT28-201ENST00000306658 LNPKQ9C0E8 428 aa21.79■■□□□ 1.08
KRT28-201ENST00000306658 RREB1Q92766 1687 aa21.79■■□□□ 1.08
KRT28-201ENST00000306658 COL5A3P25940 1745 aaPredicted RBP21.79■■□□□ 1.08
KRT28-201ENST00000306658 POLA2Q14181 598 aa21.79■■□□□ 1.08
KRT28-201ENST00000306658 LINC00116Q8NCU8 138 aa21.79■■□□□ 1.08
KRT28-201ENST00000306658 SUCLG2Q96I99 432 aa21.79■■□□□ 1.08
KRT28-201ENST00000306658 ISCA1Q9BUE6 129 aa21.79■■□□□ 1.08
KRT28-201ENST00000306658 TSHZ2Q9NRE2 1034 aa21.79■■□□□ 1.08
KRT28-201ENST00000306658 CCNL1Q9UK58 526 aaPredicted RBP21.79■■□□□ 1.08
KRT28-201ENST00000306658 MYH14Q7Z406 1995 aaKnown RBP21.78■■□□□ 1.08
KRT28-201ENST00000306658 UBE3BQ7Z3V4 1068 aa21.78■■□□□ 1.08
KRT28-201ENST00000306658 CNTNAP4Q9C0A0 1308 aa21.78■■□□□ 1.08
KRT28-201ENST00000306658 H7C1W4 665 aa21.77■■□□□ 1.08
KRT28-201ENST00000306658 RC3H1Q5TC82 1133 aaKnown RBP21.77■■□□□ 1.08
KRT28-201ENST00000306658 TBC1D2BQ9UPU7 963 aa21.77■■□□□ 1.08
KRT28-201ENST00000306658 COL15A1P39059 1388 aa21.77■■□□□ 1.08
KRT28-201ENST00000306658 BICC1Q9H694 974 aaKnown RBP21.76■■□□□ 1.07
KRT28-201ENST00000306658 PDE4AP27815 886 aa21.75■■□□□ 1.07
KRT28-201ENST00000306658 HLFQ16534 295 aa21.75■■□□□ 1.07
KRT28-201ENST00000306658 KAZALD1Q96I82 304 aa21.75■■□□□ 1.07
KRT28-201ENST00000306658 KCNQ4P56696 695 aa21.75■■□□□ 1.07
KRT28-201ENST00000306658 EXOC6BQ9Y2D4 811 aa21.75■■□□□ 1.07
KRT28-201ENST00000306658 LY75O60449 1722 aa21.75■■□□□ 1.07
KRT28-201ENST00000306658 CASP7P55210 303 aa21.74■■□□□ 1.07
KRT28-201ENST00000306658 HSP90AB4PQ58FF6 505 aa21.74■■□□□ 1.07
KRT28-201ENST00000306658 APBB1O00213 710 aa21.73■■□□□ 1.07
KRT28-201ENST00000306658 RAB11FIP3O75154 756 aa21.73■■□□□ 1.07
KRT28-201ENST00000306658 SURF6O75683 361 aaKnown RBP21.73■■□□□ 1.07
KRT28-201ENST00000306658 TRIM37O94972 964 aa21.73■■□□□ 1.07
KRT28-201ENST00000306658 JARID2Q92833 1246 aaPredicted RBP21.72■■□□□ 1.07
KRT28-201ENST00000306658 LRRCC1Q9C099 1032 aa21.72■■□□□ 1.07
KRT28-201ENST00000306658 RGS17Q9UGC6 210 aaPredicted RBP21.72■■□□□ 1.07
KRT28-201ENST00000306658 NUP98P52948 1817 aa21.72■■□□□ 1.07
KRT28-201ENST00000306658 RPS6KA4O75676 772 aa21.71■■□□□ 1.07
KRT28-201ENST00000306658 PCCAP05165 728 aaPredicted RBP21.71■■□□□ 1.07
KRT28-201ENST00000306658 HMGB2P26583 209 aaKnown RBP21.71■■□□□ 1.07
KRT28-201ENST00000306658 RABL6Q3YEC7 729 aaPredicted RBP21.71■■□□□ 1.07
KRT28-201ENST00000306658 NOP58Q9Y2X3 529 aaKnown RBP21.71■■□□□ 1.07
KRT28-201ENST00000306658 CAMTA2O94983 1202 aa21.7■■□□□ 1.06
KRT28-201ENST00000306658 FAM161AQ3B820 660 aa21.7■■□□□ 1.06
KRT28-201ENST00000306658 EPHA10Q5JZY3 1008 aa21.7■■□□□ 1.06
KRT28-201ENST00000306658 NLRP10Q86W26 655 aa21.7■■□□□ 1.06
KRT28-201ENST00000306658 ZBTB38Q8NAP3 1195 aaPredicted RBP21.7■■□□□ 1.06
KRT28-201ENST00000306658 ZNF652Q9Y2D9 606 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms