RNA–Protein interactions for RNA: ENST00000304954.3

CSN3-201, Transcript of casein kappa, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSN3, Length 836 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSN3-201ENST00000304954 NXF1Q9UBU9 619 aaKnown RBP8.68□□□□□ -1.02
CSN3-201ENST00000304954 A0A1W2PNR3 127 aa8.67□□□□□ -1.02
CSN3-201ENST00000304954 FAM13AO94988 1023 aa8.67□□□□□ -1.02
CSN3-201ENST00000304954 FKBP4Q02790 459 aaKnown RBP eCLIP8.67□□□□□ -1.02
CSN3-201ENST00000304954 SAMD5Q5TGI4 173 aa8.67□□□□□ -1.02
CSN3-201ENST00000304954 GPAMQ9HCL2 828 aa8.67□□□□□ -1.02
CSN3-201ENST00000304954 STIM2Q9P246 746 aa8.67□□□□□ -1.02
CSN3-201ENST00000304954 PHF24Q9UPV7 400 aa8.67□□□□□ -1.02
CSN3-201ENST00000304954 TGFBR3LH3BV60 316 aa8.66□□□□□ -1.02
CSN3-201ENST00000304954 PPFIA3O75145 1194 aa8.66□□□□□ -1.02
CSN3-201ENST00000304954 ABL1P00519 1130 aa8.66□□□□□ -1.02
CSN3-201ENST00000304954 DGKZQ13574 1117 aa8.66□□□□□ -1.02
CSN3-201ENST00000304954 NAA30Q147X3 362 aaPredicted RBP8.66□□□□□ -1.02
CSN3-201ENST00000304954 COX20Q5RI15 118 aa8.66□□□□□ -1.02
CSN3-201ENST00000304954 SLC16A10Q8TF71 515 aa8.66□□□□□ -1.02
CSN3-201ENST00000304954 EPB42P16452 691 aa8.65□□□□□ -1.02
CSN3-201ENST00000304954 NANOS1Q8WY41 292 aaKnown RBP8.65□□□□□ -1.02
CSN3-201ENST00000304954 SUSD3Q96L08 255 aa8.65□□□□□ -1.02
CSN3-201ENST00000304954 TRERF1Q96PN7 1200 aa8.65□□□□□ -1.02
CSN3-201ENST00000304954 RUBCNLQ9H714 662 aa8.65□□□□□ -1.02
CSN3-201ENST00000304954 SEPT3Q9UH03 358 aa8.65□□□□□ -1.02
CSN3-201ENST00000304954 IVNS1ABPQ9Y6Y0 642 aa8.65□□□□□ -1.02
CSN3-201ENST00000304954 SV2AQ7L0J3 742 aa8.64□□□□□ -1.03
CSN3-201ENST00000304954 GLYCTKQ8IVS8 523 aa8.64□□□□□ -1.03
CSN3-201ENST00000304954 C7orf43Q8WVR3 580 aa8.64□□□□□ -1.03
CSN3-201ENST00000304954 IFT43Q96FT9 208 aa8.64□□□□□ -1.03
CSN3-201ENST00000304954 POTECB2RU33 542 aa8.63□□□□□ -1.03
CSN3-201ENST00000304954 ICMTO60725 284 aa8.63□□□□□ -1.03
CSN3-201ENST00000304954 NPR3P17342 541 aa8.63□□□□□ -1.03
CSN3-201ENST00000304954 LAMC2Q13753 1193 aa8.63□□□□□ -1.03
CSN3-201ENST00000304954 C11orf16Q9NQ32 467 aa8.63□□□□□ -1.03
CSN3-201ENST00000304954 PCDHGC4Q9Y5F7 938 aa8.63□□□□□ -1.03
CSN3-201ENST00000304954 RPLP1P05386 114 aaKnown RBP8.62□□□□□ -1.03
CSN3-201ENST00000304954 FAM157BP0CG42 384 aa8.62□□□□□ -1.03
CSN3-201ENST00000304954 PCSK2P16519 638 aa8.62□□□□□ -1.03
CSN3-201ENST00000304954 LRRC69Q6ZNQ3 347 aa8.62□□□□□ -1.03
CSN3-201ENST00000304954 ZNF837Q96EG3 531 aaPredicted RBP8.62□□□□□ -1.03
CSN3-201ENST00000304954 CFHR5Q9BXR6 569 aa8.62□□□□□ -1.03
CSN3-201ENST00000304954 LRFN2Q9ULH4 789 aa8.62□□□□□ -1.03
CSN3-201ENST00000304954 DNMT3AQ9Y6K1 912 aaPredicted RBP8.62□□□□□ -1.03
CSN3-201ENST00000304954 SOWAHDA6NJG2 315 aa8.61□□□□□ -1.03
CSN3-201ENST00000304954 ATXN7O15265 892 aaPredicted RBP8.61□□□□□ -1.03
CSN3-201ENST00000304954 SERPINB4P48594 390 aa8.61□□□□□ -1.03
CSN3-201ENST00000304954 DBN1Q16643 649 aa8.61□□□□□ -1.03
CSN3-201ENST00000304954 NOM1Q5C9Z4 860 aaKnown RBP8.61□□□□□ -1.03
CSN3-201ENST00000304954 CAPN12Q6ZSI9 719 aa8.61□□□□□ -1.03
CSN3-201ENST00000304954 SAP130Q9H0E3 1048 aa8.61□□□□□ -1.03
CSN3-201ENST00000304954 KLK14Q9P0G3 267 aa8.61□□□□□ -1.03
CSN3-201ENST00000304954 ATXN7L1Q9ULK2 861 aaPredicted RBP8.61□□□□□ -1.03
CSN3-201ENST00000304954 CDC14CA4D256 554 aa8.6□□□□□ -1.03
CSN3-201ENST00000304954 H3BM21 787 aa8.6□□□□□ -1.03
CSN3-201ENST00000304954 H3BRB1 525 aa8.6□□□□□ -1.03
CSN3-201ENST00000304954 ARSDP51689 593 aa8.6□□□□□ -1.03
CSN3-201ENST00000304954 BTLAQ7Z6A9 289 aa8.6□□□□□ -1.03
CSN3-201ENST00000304954 CEP63Q96MT8 703 aa8.6□□□□□ -1.03
CSN3-201ENST00000304954 ZCCHC2Q9C0B9 1178 aaKnown RBP8.6□□□□□ -1.03
CSN3-201ENST00000304954 TUT1Q9H6E5 874 aaKnown RBP8.6□□□□□ -1.03
CSN3-201ENST00000304954 EFCC1Q9HA90 598 aa8.6□□□□□ -1.03
CSN3-201ENST00000304954 TERTO14746 1132 aaKnown RBP8.59□□□□□ -1.03
CSN3-201ENST00000304954 TNFRSF10BO14763 440 aa8.59□□□□□ -1.03
CSN3-201ENST00000304954 MICAL2O94851 1124 aa8.59□□□□□ -1.03
CSN3-201ENST00000304954 USP5P45974 858 aa8.59□□□□□ -1.03
CSN3-201ENST00000304954 TREML1Q86YW5 311 aa8.59□□□□□ -1.03
CSN3-201ENST00000304954 TTC16Q8NEE8 873 aa8.59□□□□□ -1.03
CSN3-201ENST00000304954 NSFL1CQ9UNZ2 370 aaKnown RBP8.59□□□□□ -1.03
CSN3-201ENST00000304954 ZNF211Q13398 564 aaPredicted RBP8.58□□□□□ -1.04
CSN3-201ENST00000304954 AAMPQ13685 434 aa8.58□□□□□ -1.04
CSN3-201ENST00000304954 SND1Q7KZF4 910 aaKnown RBP eCLIP8.58□□□□□ -1.04
CSN3-201ENST00000304954 PIK3R5Q8WYR1 880 aa8.58□□□□□ -1.04
CSN3-201ENST00000304954 IRF7Q92985 503 aa8.58□□□□□ -1.04
CSN3-201ENST00000304954 HSH2DQ96JZ2 352 aa8.58□□□□□ -1.04
CSN3-201ENST00000304954 BIN2Q9UBW5 565 aaPredicted RBP8.58□□□□□ -1.04
CSN3-201ENST00000304954 FNDC3AQ9Y2H6 1198 aaKnown RBP8.58□□□□□ -1.04
CSN3-201ENST00000304954 VSIG8P0DPA2 414 aa8.57□□□□□ -1.04
CSN3-201ENST00000304954 SCNN1AP37088 669 aa8.57□□□□□ -1.04
CSN3-201ENST00000304954 ZAP70P43403 619 aa8.57□□□□□ -1.04
CSN3-201ENST00000304954 IDH3AP50213 366 aa8.57□□□□□ -1.04
CSN3-201ENST00000304954 KCNQ4P56696 695 aa8.57□□□□□ -1.04
CSN3-201ENST00000304954 NEUROD1Q13562 356 aa8.57□□□□□ -1.04
CSN3-201ENST00000304954 VWA5B2Q8N398 1253 aa8.57□□□□□ -1.04
CSN3-201ENST00000304954 ZNF280CQ8ND82 737 aa8.57□□□□□ -1.04
CSN3-201ENST00000304954 GTPBP3Q969Y2 492 aaKnown RBP8.57□□□□□ -1.04
CSN3-201ENST00000304954 CITED4Q96RK1 184 aa8.57□□□□□ -1.04
CSN3-201ENST00000304954 BRD7Q9NPI1 651 aa8.57□□□□□ -1.04
CSN3-201ENST00000304954 KHNYNO15037 678 aaKnown RBP8.56□□□□□ -1.04
CSN3-201ENST00000304954 NDUFB5O43674 189 aa8.56□□□□□ -1.04
CSN3-201ENST00000304954 MPSTP25325 297 aa8.56□□□□□ -1.04
CSN3-201ENST00000304954 EIF1AXP47813 144 aaKnown RBP8.56□□□□□ -1.04
CSN3-201ENST00000304954 TYRO3Q06418 890 aa8.56□□□□□ -1.04
CSN3-201ENST00000304954 FAM182BQ5T319 152 aa8.56□□□□□ -1.04
CSN3-201ENST00000304954 CUEDC1Q9NWM3 386 aaPredicted RBP8.56□□□□□ -1.04
CSN3-201ENST00000304954 MARK1Q9P0L2 795 aa8.56□□□□□ -1.04
CSN3-201ENST00000304954 DMGDHQ9UI17 866 aaKnown RBP8.56□□□□□ -1.04
CSN3-201ENST00000304954 KCNH4Q9UQ05 1017 aa8.56□□□□□ -1.04
CSN3-201ENST00000304954 BCS1LQ9Y276 419 aa8.56□□□□□ -1.04
CSN3-201ENST00000304954 EFSO43281 561 aa8.55□□□□□ -1.04
CSN3-201ENST00000304954 MZF1P28698 734 aaPredicted RBP8.55□□□□□ -1.04
CSN3-201ENST00000304954 INPP5BP32019 993 aa8.55□□□□□ -1.04
CSN3-201ENST00000304954 TNP2Q05952 138 aa8.55□□□□□ -1.04
CSN3-201ENST00000304954 EHHADHQ08426 723 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms