RNA–Protein interactions for RNA: ENST00000304060.9

ZNF440-201, Transcript of zinc finger protein 440, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF440, Length 4,189 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-201ENST00000304060 RBM17Q96I25 401 aaKnown RBP7.74□□□□□ -1.17
ZNF440-201ENST00000304060 ZNF408Q9H9D4 720 aa7.74□□□□□ -1.17
ZNF440-201ENST00000304060 WDR90Q96KV7 1748 aa7.74□□□□□ -1.17
ZNF440-201ENST00000304060 COL15A1P39059 1388 aa7.74□□□□□ -1.17
ZNF440-201ENST00000304060 PKN2Q16513 984 aaKnown RBP7.74□□□□□ -1.17
ZNF440-201ENST00000304060 CHMP4AQ9BY43 222 aa7.74□□□□□ -1.17
ZNF440-201ENST00000304060 HSPA8P11142 646 aaKnown RBP7.73□□□□□ -1.17
ZNF440-201ENST00000304060 PRPF38BQ5VTL8 546 aaKnown RBP7.73□□□□□ -1.17
ZNF440-201ENST00000304060 GPC2Q8N158 579 aa7.73□□□□□ -1.17
ZNF440-201ENST00000304060 DDNO94850 711 aaPredicted RBP7.73□□□□□ -1.17
ZNF440-201ENST00000304060 IARSP41252 1262 aaKnown RBP7.73□□□□□ -1.17
ZNF440-201ENST00000304060 SULT6B1Q6IMI4 303 aa7.73□□□□□ -1.17
ZNF440-201ENST00000304060 FOXD4L1Q9NU39 408 aa7.73□□□□□ -1.17
ZNF440-201ENST00000304060 C4BP0C0L5 1744 aa7.73□□□□□ -1.17
ZNF440-201ENST00000304060 DOT1LQ8TEK3 1739 aa7.73□□□□□ -1.17
ZNF440-201ENST00000304060 RASSF10A6NK89 507 aa7.73□□□□□ -1.17
ZNF440-201ENST00000304060 IL6STP40189 918 aaPredicted RBP7.73□□□□□ -1.17
ZNF440-201ENST00000304060 DCPSQ96C86 337 aaKnown RBP7.72□□□□□ -1.17
ZNF440-201ENST00000304060 L3MBTL3Q96JM7 780 aaPredicted RBP7.72□□□□□ -1.17
ZNF440-201ENST00000304060 PRPF40BQ6NWY9 871 aaKnown RBP7.72□□□□□ -1.17
ZNF440-201ENST00000304060 DZIP3Q86Y13 1208 aaKnown RBP7.72□□□□□ -1.17
ZNF440-201ENST00000304060 CCER1Q8TC90 406 aaPredicted RBP7.72□□□□□ -1.17
ZNF440-201ENST00000304060 SLC52A2Q9HAB3 445 aa7.72□□□□□ -1.17
ZNF440-201ENST00000304060 SOS1Q07889 1333 aaPredicted RBP7.72□□□□□ -1.17
ZNF440-201ENST00000304060 CLEC4GQ6UXB4 293 aa7.71□□□□□ -1.17
ZNF440-201ENST00000304060 CDC37L1Q7L3B6 337 aa7.71□□□□□ -1.17
ZNF440-201ENST00000304060 PNISRQ8TF01 805 aaKnown RBP7.71□□□□□ -1.17
ZNF440-201ENST00000304060 VPS33BQ9H267 617 aa7.71□□□□□ -1.17
ZNF440-201ENST00000304060 RGL2O15211 777 aa7.71□□□□□ -1.18
ZNF440-201ENST00000304060 TM4SF1P30408 202 aa7.71□□□□□ -1.18
ZNF440-201ENST00000304060 TNRC6CQ9HCJ0 1690 aaKnown RBP7.71□□□□□ -1.18
ZNF440-201ENST00000304060 U2SURPO15042 1029 aaKnown RBP7.71□□□□□ -1.18
ZNF440-201ENST00000304060 DDR1Q08345 913 aa7.71□□□□□ -1.18
ZNF440-201ENST00000304060 TCIRG1Q13488 830 aa7.71□□□□□ -1.18
ZNF440-201ENST00000304060 EIF4A2Q14240 407 aaKnown RBP7.71□□□□□ -1.18
ZNF440-201ENST00000304060 TMC4Q7Z404 712 aa7.71□□□□□ -1.18
ZNF440-201ENST00000304060 PPP1R42Q7Z4L9 355 aa7.71□□□□□ -1.18
ZNF440-201ENST00000304060 EYA3Q99504 573 aa7.71□□□□□ -1.18
ZNF440-201ENST00000304060 ADARB2Q9NS39 739 aaKnown RBP7.71□□□□□ -1.18
ZNF440-201ENST00000304060 PPIP5K2O43314 1243 aa7.7□□□□□ -1.18
ZNF440-201ENST00000304060 SYNE4Q8N205 404 aa7.7□□□□□ -1.18
ZNF440-201ENST00000304060 DIAPH1O60610 1272 aaKnown RBP7.7□□□□□ -1.18
ZNF440-201ENST00000304060 TTLL12Q14166 644 aaPredicted RBP7.7□□□□□ -1.18
ZNF440-201ENST00000304060 OTUD7BQ6GQQ9 843 aa7.7□□□□□ -1.18
ZNF440-201ENST00000304060 SULF1Q8IWU6 871 aa7.7□□□□□ -1.18
ZNF440-201ENST00000304060 DDX21Q9NR30 783 aaKnown RBP eCLIP7.7□□□□□ -1.18
ZNF440-201ENST00000304060 C5P01031 1676 aa7.7□□□□□ -1.18
ZNF440-201ENST00000304060 CELF2O95319 508 aaKnown RBP7.7□□□□□ -1.18
ZNF440-201ENST00000304060 HSP90AB3PQ58FF7 597 aa7.7□□□□□ -1.18
ZNF440-201ENST00000304060 MAP1SQ66K74 1059 aaPredicted RBP7.7□□□□□ -1.18
ZNF440-201ENST00000304060 CTU1Q7Z7A3 348 aaKnown RBP7.7□□□□□ -1.18
ZNF440-201ENST00000304060 BRPF1P55201 1214 aaPredicted RBP7.7□□□□□ -1.18
ZNF440-201ENST00000304060 ZC3H15Q8WU90 426 aaKnown RBP7.7□□□□□ -1.18
ZNF440-201ENST00000304060 NIP7Q9Y221 180 aaKnown RBP eCLIP7.7□□□□□ -1.18
ZNF440-201ENST00000304060 NLRP3Q96P20 1036 aa7.69□□□□□ -1.18
ZNF440-201ENST00000304060 LTN1O94822 1766 aa7.69□□□□□ -1.18
ZNF440-201ENST00000304060 CIAPIN1Q6FI81 312 aa7.69□□□□□ -1.18
ZNF440-201ENST00000304060 HHIPL1Q96JK4 782 aa7.69□□□□□ -1.18
ZNF440-201ENST00000304060 TMEM106CQ9BVX2 250 aa7.69□□□□□ -1.18
ZNF440-201ENST00000304060 HUNKP57058 714 aa7.69□□□□□ -1.18
ZNF440-201ENST00000304060 TBC1D2BQ9UPU7 963 aa7.69□□□□□ -1.18
ZNF440-201ENST00000304060 CDHR2Q9BYE9 1310 aa7.68□□□□□ -1.18
ZNF440-201ENST00000304060 RNMTO43148 476 aaKnown RBP7.68□□□□□ -1.18
ZNF440-201ENST00000304060 MON2Q7Z3U7 1717 aa7.68□□□□□ -1.18
ZNF440-201ENST00000304060 MCOLN1Q9GZU1 580 aa7.68□□□□□ -1.18
ZNF440-201ENST00000304060 ZBTB1Q9Y2K1 713 aa7.68□□□□□ -1.18
ZNF440-201ENST00000304060 SMIM5Q71RC9 77 aa7.68□□□□□ -1.18
ZNF440-201ENST00000304060 LY75O60449 1722 aa7.68□□□□□ -1.18
ZNF440-201ENST00000304060 C4AP0C0L4 1744 aa7.68□□□□□ -1.18
ZNF440-201ENST00000304060 RGPD5Q99666 1765 aa7.68□□□□□ -1.18
ZNF440-201ENST00000304060 FAM177BA6PVY3 158 aa7.68□□□□□ -1.18
ZNF440-201ENST00000304060 GNAT3A8MTJ3 354 aa7.68□□□□□ -1.18
ZNF440-201ENST00000304060 CYP19A1P11511 503 aaPredicted RBP7.68□□□□□ -1.18
ZNF440-201ENST00000304060 NFKBIEO00221 500 aa7.67□□□□□ -1.18
ZNF440-201ENST00000304060 SNRPA1P09661 255 aaKnown RBP7.67□□□□□ -1.18
ZNF440-201ENST00000304060 PRR5LQ6MZQ0 368 aa7.67□□□□□ -1.18
ZNF440-201ENST00000304060 DDX46Q7L014 1031 aaKnown RBP7.67□□□□□ -1.18
ZNF440-201ENST00000304060 POLKQ9UBT6 870 aa7.67□□□□□ -1.18
ZNF440-201ENST00000304060 SAGE1Q9NXZ1 904 aa7.67□□□□□ -1.18
ZNF440-201ENST00000304060 EIF5BO60841 1220 aaKnown RBP7.67□□□□□ -1.18
ZNF440-201ENST00000304060 FBLN1P23142 703 aa7.67□□□□□ -1.18
ZNF440-201ENST00000304060 PARP10Q53GL7 1025 aa7.67□□□□□ -1.18
ZNF440-201ENST00000304060 PSMD1Q99460 953 aa7.67□□□□□ -1.18
ZNF440-201ENST00000304060 ZNF277Q9NRM2 450 aaPredicted RBP7.67□□□□□ -1.18
ZNF440-201ENST00000304060 BTBD11A6QL63 1104 aa7.66□□□□□ -1.18
ZNF440-201ENST00000304060 ALDH1A1P00352 501 aa7.66□□□□□ -1.18
ZNF440-201ENST00000304060 SREBF2Q12772 1141 aa7.66□□□□□ -1.18
ZNF440-201ENST00000304060 DIEXFQ68CQ4 756 aaKnown RBP7.66□□□□□ -1.18
ZNF440-201ENST00000304060 YTHDC1Q96MU7 727 aaKnown RBP7.66□□□□□ -1.18
ZNF440-201ENST00000304060 TLL2Q9Y6L7 1015 aa7.66□□□□□ -1.18
ZNF440-201ENST00000304060 KCNA3P22001 575 aa7.66□□□□□ -1.18
ZNF440-201ENST00000304060 RGS19P49795 217 aa7.66□□□□□ -1.18
ZNF440-201ENST00000304060 ZNF157P51786 506 aaPredicted RBP7.66□□□□□ -1.18
ZNF440-201ENST00000304060 INTS3Q68E01 1043 aaKnown RBP7.66□□□□□ -1.18
ZNF440-201ENST00000304060 CYP4F22Q6NT55 531 aa7.66□□□□□ -1.18
ZNF440-201ENST00000304060 DPP8Q6V1X1 898 aaPredicted RBP7.66□□□□□ -1.18
ZNF440-201ENST00000304060 RNF123Q5XPI4 1314 aa7.66□□□□□ -1.18
ZNF440-201ENST00000304060 KDRP35968 1356 aa7.65□□□□□ -1.18
ZNF440-201ENST00000304060 SRGNP10124 158 aa7.65□□□□□ -1.18
ZNF440-201ENST00000304060 GBA2Q9HCG7 927 aaPredicted RBP7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms