RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 TIGD1Q96MW7 591 aa14.26□□□□□ -0.13
ABCA3-201ENST00000301732 IQSEC3Q9UPP2 1182 aaPredicted RBP14.26□□□□□ -0.13
ABCA3-201ENST00000301732 GOLGA8AA7E2F4 631 aa14.26□□□□□ -0.13
ABCA3-201ENST00000301732 ATP5J2-PTCD1G3V325 749 aa14.26□□□□□ -0.13
ABCA3-201ENST00000301732 SLFN5Q08AF3 891 aa14.26□□□□□ -0.13
ABCA3-201ENST00000301732 CCDC40Q4G0X9 1142 aa14.26□□□□□ -0.13
ABCA3-201ENST00000301732 VPS18Q9P253 973 aa14.26□□□□□ -0.13
ABCA3-201ENST00000301732 YEATS4O95619 227 aa14.25□□□□□ -0.13
ABCA3-201ENST00000301732 SELENOSQ9BQE4 189 aa14.25□□□□□ -0.13
ABCA3-201ENST00000301732 A0A1W2PRG0 241 aa14.25□□□□□ -0.13
ABCA3-201ENST00000301732 MPRIPQ6WCQ1 1025 aa14.25□□□□□ -0.13
ABCA3-201ENST00000301732 MRRFQ96E11 262 aaKnown RBP14.25□□□□□ -0.13
ABCA3-201ENST00000301732 XRCC6P12956 609 aaKnown RBP eCLIP14.25□□□□□ -0.13
ABCA3-201ENST00000301732 CRACR2BQ8N4Y2 399 aaPredicted RBP14.25□□□□□ -0.13
ABCA3-201ENST00000301732 PLIN2Q99541 437 aa14.25□□□□□ -0.13
ABCA3-201ENST00000301732 TSG101Q99816 390 aa14.25□□□□□ -0.13
ABCA3-201ENST00000301732 DNAJC25Q9H1X3 360 aa14.25□□□□□ -0.13
ABCA3-201ENST00000301732 FAM83GA6ND36 823 aa14.24□□□□□ -0.13
ABCA3-201ENST00000301732 STX6O43752 255 aa14.24□□□□□ -0.13
ABCA3-201ENST00000301732 CCDC6Q16204 474 aa14.24□□□□□ -0.13
ABCA3-201ENST00000301732 TXLNBQ8N3L3 684 aa14.24□□□□□ -0.13
ABCA3-201ENST00000301732 SLC26A6Q9BXS9 759 aa14.24□□□□□ -0.13
ABCA3-201ENST00000301732 GCOM1H8Y6P7 765 aaPredicted RBP14.24□□□□□ -0.13
ABCA3-201ENST00000301732 MYZAPP0CAP1 466 aa14.24□□□□□ -0.13
ABCA3-201ENST00000301732 FAM69CQ0P6D2 419 aa14.24□□□□□ -0.13
ABCA3-201ENST00000301732 ANKIB1Q9P2G1 1089 aa14.24□□□□□ -0.13
ABCA3-201ENST00000301732 PLEKHA4Q9H4M7 779 aa14.24□□□□□ -0.13
ABCA3-201ENST00000301732 CEP131Q9UPN4 1083 aa14.24□□□□□ -0.13
ABCA3-201ENST00000301732 SBNO2Q9Y2G9 1366 aa14.24□□□□□ -0.13
ABCA3-201ENST00000301732 SSRP1Q08945 709 aaKnown RBP14.24□□□□□ -0.13
ABCA3-201ENST00000301732 CIZ1Q9ULV3 898 aaPredicted RBP14.24□□□□□ -0.13
ABCA3-201ENST00000301732 CTNNA3Q9UI47 895 aa14.24□□□□□ -0.13
ABCA3-201ENST00000301732 ZNF213O14771 459 aa14.23□□□□□ -0.13
ABCA3-201ENST00000301732 USO1O60763 962 aaKnown RBP14.23□□□□□ -0.13
ABCA3-201ENST00000301732 RNASE9P60153 205 aaKnown RBP14.23□□□□□ -0.13
ABCA3-201ENST00000301732 NAA25Q14CX7 972 aa14.23□□□□□ -0.13
ABCA3-201ENST00000301732 LZTFL1Q9NQ48 299 aa14.23□□□□□ -0.13
ABCA3-201ENST00000301732 PPP1R14CQ8TAE6 165 aa14.23□□□□□ -0.13
ABCA3-201ENST00000301732 UBE2Q2Q8WVN8 375 aa14.23□□□□□ -0.13
ABCA3-201ENST00000301732 STX17P56962 302 aa14.23□□□□□ -0.13
ABCA3-201ENST00000301732 C16orf71Q8IYS4 520 aaPredicted RBP14.23□□□□□ -0.13
ABCA3-201ENST00000301732 IRX5P78411 483 aaPredicted RBP14.23□□□□□ -0.13
ABCA3-201ENST00000301732 NOLC1Q14978 699 aaKnown RBP eCLIP14.23□□□□□ -0.13
ABCA3-201ENST00000301732 ZSCAN25Q6NSZ9 544 aa14.23□□□□□ -0.13
ABCA3-201ENST00000301732 PROSER2Q86WR7 435 aaPredicted RBP14.23□□□□□ -0.13
ABCA3-201ENST00000301732 AOPEPQ8N6M6 819 aa14.23□□□□□ -0.13
ABCA3-201ENST00000301732 SAMM50Q9Y512 469 aa14.23□□□□□ -0.13
ABCA3-201ENST00000301732 USP16Q9Y5T5 823 aa14.23□□□□□ -0.13
ABCA3-201ENST00000301732 U3KPZ7 1027 aaPredicted RBP14.22□□□□□ -0.13
ABCA3-201ENST00000301732 SMG6Q86US8 1419 aaKnown RBP14.22□□□□□ -0.13
ABCA3-201ENST00000301732 STAMBPO95630 424 aa14.22□□□□□ -0.13
ABCA3-201ENST00000301732 SKILP12757 684 aa14.22□□□□□ -0.13
ABCA3-201ENST00000301732 AAMPQ13685 434 aa14.22□□□□□ -0.13
ABCA3-201ENST00000301732 USP48Q86UV5 1035 aa14.22□□□□□ -0.13
ABCA3-201ENST00000301732 PPP1R12BO60237 982 aaPredicted RBP14.22□□□□□ -0.13
ABCA3-201ENST00000301732 HSF2BPO75031 334 aa14.22□□□□□ -0.13
ABCA3-201ENST00000301732 CAPN2P17655 700 aa14.22□□□□□ -0.13
ABCA3-201ENST00000301732 U2AF2P26368 475 aaKnown RBP eCLIP14.22□□□□□ -0.13
ABCA3-201ENST00000301732 UBASH3AP57075 661 aa14.22□□□□□ -0.13
ABCA3-201ENST00000301732 IFT81Q8WYA0 676 aa14.22□□□□□ -0.13
ABCA3-201ENST00000301732 ZBTB3Q9H5J0 574 aa14.22□□□□□ -0.13
ABCA3-201ENST00000301732 LIMCH1Q9UPQ0 1083 aa14.22□□□□□ -0.13
ABCA3-201ENST00000301732 WAPLQ7Z5K2 1190 aa14.22□□□□□ -0.13
ABCA3-201ENST00000301732 GPRASP1Q5JY77 1395 aa14.22□□□□□ -0.13
ABCA3-201ENST00000301732 ERCC3P19447 782 aa14.21□□□□□ -0.13
ABCA3-201ENST00000301732 PRIM1P49642 420 aaKnown RBP14.21□□□□□ -0.13
ABCA3-201ENST00000301732 RARSP54136 660 aaKnown RBP14.21□□□□□ -0.13
ABCA3-201ENST00000301732 UIMC1Q96RL1 719 aa14.21□□□□□ -0.13
ABCA3-201ENST00000301732 IGHMBP2P38935 993 aaKnown RBP14.21□□□□□ -0.13
ABCA3-201ENST00000301732 ZNF354CQ86Y25 554 aa14.21□□□□□ -0.13
ABCA3-201ENST00000301732 TLDC2A0PJX2 215 aa14.21□□□□□ -0.13
ABCA3-201ENST00000301732 KRT32Q14532 448 aa14.21□□□□□ -0.13
ABCA3-201ENST00000301732 STX1AQ16623 288 aa14.21□□□□□ -0.13
ABCA3-201ENST00000301732 MICALCLQ6ZW33 695 aa14.21□□□□□ -0.13
ABCA3-201ENST00000301732 N4BP3O15049 544 aa14.21□□□□□ -0.13
ABCA3-201ENST00000301732 KRT13P13646 458 aa14.21□□□□□ -0.13
ABCA3-201ENST00000301732 POTEJP0CG39 1038 aa14.21□□□□□ -0.14
ABCA3-201ENST00000301732 LMOD1P29536 600 aaPredicted RBP14.21□□□□□ -0.14
ABCA3-201ENST00000301732 CCDC25Q86WR0 208 aa14.21□□□□□ -0.14
ABCA3-201ENST00000301732 KIF1BPQ96EK5 621 aa14.21□□□□□ -0.14
ABCA3-201ENST00000301732 SCAND2PQ9GZW5 306 aaPredicted RBP14.21□□□□□ -0.14
ABCA3-201ENST00000301732 KIF20AO95235 890 aa14.2□□□□□ -0.14
ABCA3-201ENST00000301732 RXRAP19793 462 aa14.2□□□□□ -0.14
ABCA3-201ENST00000301732 WASF1Q92558 559 aa14.2□□□□□ -0.14
ABCA3-201ENST00000301732 CLGNO14967 610 aa14.2□□□□□ -0.14
ABCA3-201ENST00000301732 PLS1Q14651 629 aa14.2□□□□□ -0.14
ABCA3-201ENST00000301732 BMS1Q14692 1282 aaKnown RBP14.2□□□□□ -0.14
ABCA3-201ENST00000301732 DZIP1Q86YF9 867 aaKnown RBP14.2□□□□□ -0.14
ABCA3-201ENST00000301732 WDR63Q8IWG1 891 aa14.2□□□□□ -0.14
ABCA3-201ENST00000301732 SYCP3Q8IZU3 236 aa14.2□□□□□ -0.14
ABCA3-201ENST00000301732 CCDC194A0A1B0GVG4 234 aa14.2□□□□□ -0.14
ABCA3-201ENST00000301732 FSD2A1L4K1 749 aa14.2□□□□□ -0.14
ABCA3-201ENST00000301732 TNNQ9UQP3 1299 aa14.2□□□□□ -0.14
ABCA3-201ENST00000301732 TRIM21P19474 475 aaKnown RBP14.2□□□□□ -0.14
ABCA3-201ENST00000301732 CA8P35219 290 aa14.2□□□□□ -0.14
ABCA3-201ENST00000301732 DNM1Q05193 864 aaKnown RBP14.2□□□□□ -0.14
ABCA3-201ENST00000301732 CEP112Q8N8E3 955 aa14.2□□□□□ -0.14
ABCA3-201ENST00000301732 CCDC63Q8NA47 563 aa14.2□□□□□ -0.14
ABCA3-201ENST00000301732 TRIM47Q96LD4 638 aa14.2□□□□□ -0.14
ABCA3-201ENST00000301732 PSMC4P43686 418 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 236 ms