RNA–Protein interactions for RNA: ENST00000300146.9

PATL1-201, Transcript of PAT1 homolog 1, processing body mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PATL1, Length 4,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PATL1-201ENST00000300146 ZNF277Q9NRM2 450 aaPredicted RBP7.31□□□□□ -1.24
PATL1-201ENST00000300146 LMOD3Q0VAK6 560 aa7.31□□□□□ -1.24
PATL1-201ENST00000300146 FBXW7Q969H0 707 aa7.31□□□□□ -1.24
PATL1-201ENST00000300146 PAXIP1Q6ZW49 1069 aaPredicted RBP7.3□□□□□ -1.24
PATL1-201ENST00000300146 TSPYL6Q8N831 410 aa7.3□□□□□ -1.24
PATL1-201ENST00000300146 PLEKHF1Q96S99 279 aa7.3□□□□□ -1.24
PATL1-201ENST00000300146 CAMTA2O94983 1202 aa7.3□□□□□ -1.24
PATL1-201ENST00000300146 MBIPQ9NS73 344 aa7.3□□□□□ -1.24
PATL1-201ENST00000300146 CARMIL3Q8ND23 1372 aa7.3□□□□□ -1.24
PATL1-201ENST00000300146 G3V3G9 751 aa7.3□□□□□ -1.24
PATL1-201ENST00000300146 RIMBP2O15034 1052 aa7.3□□□□□ -1.24
PATL1-201ENST00000300146 DCAF8Q5TAQ9 597 aa7.3□□□□□ -1.24
PATL1-201ENST00000300146 C8orf58Q8NAV2 365 aa7.29□□□□□ -1.24
PATL1-201ENST00000300146 YTHDC1Q96MU7 727 aaKnown RBP7.29□□□□□ -1.24
PATL1-201ENST00000300146 TM4SF1P30408 202 aa7.29□□□□□ -1.24
PATL1-201ENST00000300146 SUSD4Q5VX71 490 aa7.29□□□□□ -1.24
PATL1-201ENST00000300146 PNISRQ8TF01 805 aaKnown RBP7.29□□□□□ -1.24
PATL1-201ENST00000300146 MYD88Q99836 296 aa7.29□□□□□ -1.24
PATL1-201ENST00000300146 TRIM35Q9UPQ4 493 aa7.29□□□□□ -1.24
PATL1-201ENST00000300146 TGFB2P61812 414 aa7.29□□□□□ -1.24
PATL1-201ENST00000300146 RBM26Q5T8P6 1007 aaKnown RBP7.29□□□□□ -1.24
PATL1-201ENST00000300146 PRPF40BQ6NWY9 871 aaKnown RBP7.29□□□□□ -1.24
PATL1-201ENST00000300146 VSIG10Q8N0Z9 540 aa7.29□□□□□ -1.24
PATL1-201ENST00000300146 GPR101Q96P66 508 aaPredicted RBP7.29□□□□□ -1.24
PATL1-201ENST00000300146 SBF2Q86WG5 1849 aa7.29□□□□□ -1.24
PATL1-201ENST00000300146 PDE6BP35913 854 aa7.28□□□□□ -1.24
PATL1-201ENST00000300146 STK31Q9BXU1 1019 aa7.28□□□□□ -1.24
PATL1-201ENST00000300146 FAM208AQ9UK61 1670 aaKnown RBP7.28□□□□□ -1.24
PATL1-201ENST00000300146 PLIN1O60240 522 aa7.28□□□□□ -1.24
PATL1-201ENST00000300146 DDNO94850 711 aaPredicted RBP7.28□□□□□ -1.24
PATL1-201ENST00000300146 C6orf229H3BNL8 230 aa7.28□□□□□ -1.24
PATL1-201ENST00000300146 SLC4A2P04920 1241 aa7.28□□□□□ -1.24
PATL1-201ENST00000300146 FKBP5Q13451 457 aaPredicted RBP7.28□□□□□ -1.24
PATL1-201ENST00000300146 NLRP3Q96P20 1036 aa7.28□□□□□ -1.24
PATL1-201ENST00000300146 NSFL1CQ9UNZ2 370 aaKnown RBP7.28□□□□□ -1.24
PATL1-201ENST00000300146 F6X3S4 739 aa7.27□□□□□ -1.24
PATL1-201ENST00000300146 C1QTNF8P60827 252 aa7.27□□□□□ -1.24
PATL1-201ENST00000300146 ANKRD13DQ6ZTN6 518 aa7.27□□□□□ -1.24
PATL1-201ENST00000300146 NUP188Q5SRE5 1749 aa7.27□□□□□ -1.25
PATL1-201ENST00000300146 GOLGA2Q08379 1002 aa7.27□□□□□ -1.25
PATL1-201ENST00000300146 NPC1L1Q9UHC9 1359 aa7.27□□□□□ -1.25
PATL1-201ENST00000300146 KCNA3P22001 575 aa7.27□□□□□ -1.25
PATL1-201ENST00000300146 C3orf67Q6ZVT6 689 aa7.27□□□□□ -1.25
PATL1-201ENST00000300146 ZNF408Q9H9D4 720 aa7.27□□□□□ -1.25
PATL1-201ENST00000300146 EXOSC9Q06265 439 aaKnown RBP7.27□□□□□ -1.25
PATL1-201ENST00000300146 DIEXFQ68CQ4 756 aaKnown RBP7.27□□□□□ -1.25
PATL1-201ENST00000300146 DPY19L2Q6NUT2 758 aa7.27□□□□□ -1.25
PATL1-201ENST00000300146 LARGE2Q8N3Y3 721 aa7.27□□□□□ -1.25
PATL1-201ENST00000300146 GNAI1P63096 354 aa7.26□□□□□ -1.25
PATL1-201ENST00000300146 UTP14AQ9BVJ6 771 aaKnown RBP7.26□□□□□ -1.25
PATL1-201ENST00000300146 BRIP1Q9BX63 1249 aa7.26□□□□□ -1.25
PATL1-201ENST00000300146 TAOK3Q9H2K8 898 aa7.26□□□□□ -1.25
PATL1-201ENST00000300146 ATP10DQ9P241 1426 aa7.26□□□□□ -1.25
PATL1-201ENST00000300146 CWF19L2Q2TBE0 894 aaKnown RBP7.26□□□□□ -1.25
PATL1-201ENST00000300146 G2E3Q7L622 706 aa7.26□□□□□ -1.25
PATL1-201ENST00000300146 JDP2Q8WYK2 163 aa7.26□□□□□ -1.25
PATL1-201ENST00000300146 SCAF8Q9UPN6 1271 aaKnown RBP7.26□□□□□ -1.25
PATL1-201ENST00000300146 MAP3K15Q6ZN16 1313 aa7.26□□□□□ -1.25
PATL1-201ENST00000300146 PI4KAP2A4QPH2 592 aa7.26□□□□□ -1.25
PATL1-201ENST00000300146 HTATSF1O43719 755 aaKnown RBP7.26□□□□□ -1.25
PATL1-201ENST00000300146 TWISTNBQ3B726 338 aaPredicted RBP7.26□□□□□ -1.25
PATL1-201ENST00000300146 PPP1R42Q7Z4L9 355 aa7.26□□□□□ -1.25
PATL1-201ENST00000300146 MIER1Q8N108 512 aa7.26□□□□□ -1.25
PATL1-201ENST00000300146 PI4KAP1Q8N8J0 262 aa7.26□□□□□ -1.25
PATL1-201ENST00000300146 CNKSR1Q969H4 720 aa7.26□□□□□ -1.25
PATL1-201ENST00000300146 NHSQ6T4R5 1651 aa7.25□□□□□ -1.25
PATL1-201ENST00000300146 RAD17O75943 681 aa7.25□□□□□ -1.25
PATL1-201ENST00000300146 CAPN15O75808 1086 aa7.25□□□□□ -1.25
PATL1-201ENST00000300146 DDX46Q7L014 1031 aaKnown RBP7.25□□□□□ -1.25
PATL1-201ENST00000300146 CDCA7LQ96GN5 454 aa7.25□□□□□ -1.25
PATL1-201ENST00000300146 MASTLQ96GX5 879 aa7.25□□□□□ -1.25
PATL1-201ENST00000300146 CFAP44Q96MT7 982 aa7.25□□□□□ -1.25
PATL1-201ENST00000300146 JAG2Q9Y219 1238 aa7.25□□□□□ -1.25
PATL1-201ENST00000300146 POTEIP0CG38 1075 aa7.25□□□□□ -1.25
PATL1-201ENST00000300146 POTEJP0CG39 1038 aa7.25□□□□□ -1.25
PATL1-201ENST00000300146 DOK7Q18PE1 504 aa7.25□□□□□ -1.25
PATL1-201ENST00000300146 ANKIB1Q9P2G1 1089 aa7.25□□□□□ -1.25
PATL1-201ENST00000300146 RNF123Q5XPI4 1314 aa7.24□□□□□ -1.25
PATL1-201ENST00000300146 CHL1O00533 1208 aa7.24□□□□□ -1.25
PATL1-201ENST00000300146 PPIP5K2O43314 1243 aa7.24□□□□□ -1.25
PATL1-201ENST00000300146 WWC1Q8IX03 1113 aa7.24□□□□□ -1.25
PATL1-201ENST00000300146 DBF4Q9UBU7 674 aaPredicted RBP7.24□□□□□ -1.25
PATL1-201ENST00000300146 MAP3K2Q9Y2U5 619 aa7.24□□□□□ -1.25
PATL1-201ENST00000300146 CEMIPQ8WUJ3 1361 aa7.24□□□□□ -1.25
PATL1-201ENST00000300146 UBN2Q6ZU65 1347 aa7.24□□□□□ -1.25
PATL1-201ENST00000300146 SRGNP10124 158 aa7.24□□□□□ -1.25
PATL1-201ENST00000300146 HNRNPUQ00839 825 aaKnown RBP eCLIP7.24□□□□□ -1.25
PATL1-201ENST00000300146 GIGYF2Q6Y7W6 1299 aaKnown RBP7.24□□□□□ -1.25
PATL1-201ENST00000300146 SPINK5Q9NQ38 1064 aaPredicted RBP7.24□□□□□ -1.25
PATL1-201ENST00000300146 SEC31BQ9NQW1 1179 aa7.24□□□□□ -1.25
PATL1-201ENST00000300146 C4BP0C0L5 1744 aa7.24□□□□□ -1.25
PATL1-201ENST00000300146 MYH14Q7Z406 1995 aaKnown RBP7.24□□□□□ -1.25
PATL1-201ENST00000300146 NFKBIEO00221 500 aa7.24□□□□□ -1.25
PATL1-201ENST00000300146 LMNB1P20700 586 aa7.24□□□□□ -1.25
PATL1-201ENST00000300146 HELBQ8NG08 1087 aaPredicted RBP7.24□□□□□ -1.25
PATL1-201ENST00000300146 DDX21Q9NR30 783 aaKnown RBP eCLIP7.24□□□□□ -1.25
PATL1-201ENST00000300146 IRS4O14654 1257 aaPredicted RBP7.23□□□□□ -1.25
PATL1-201ENST00000300146 UBE3BQ7Z3V4 1068 aa7.23□□□□□ -1.25
PATL1-201ENST00000300146 FRAT1Q92837 279 aaPredicted RBP7.23□□□□□ -1.25
PATL1-201ENST00000300146 CICQ96RK0 1608 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms