RNA–Protein interactions for RNA: ENST00000299752.8

CDH16-201, Transcript of cadherin 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH16, Length 2,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16-201ENST00000299752 DOT1LQ8TEK3 1739 aa17.61■□□□□ 0.41
CDH16-201ENST00000299752 ANKRD13DQ6ZTN6 518 aa17.61■□□□□ 0.41
CDH16-201ENST00000299752 CDCA7Q9BWT1 371 aaPredicted RBP17.61■□□□□ 0.41
CDH16-201ENST00000299752 BARGINQ6ZT62 677 aa17.6■□□□□ 0.41
CDH16-201ENST00000299752 BCL9O00512 1426 aa17.6■□□□□ 0.41
CDH16-201ENST00000299752 IGKV5-2P06315 115 aa17.59■□□□□ 0.41
CDH16-201ENST00000299752 ATP8B2P98198 1209 aa17.59■□□□□ 0.41
CDH16-201ENST00000299752 BMP2KLQ5H9B9 411 aa17.58■□□□□ 0.41
CDH16-201ENST00000299752 UBR2Q8IWV8 1755 aa17.58■□□□□ 0.41
CDH16-201ENST00000299752 PLEKHM2Q8IWE5 1019 aa17.58■□□□□ 0.4
CDH16-201ENST00000299752 OTUD7AQ8TE49 926 aaPredicted RBP17.58■□□□□ 0.4
CDH16-201ENST00000299752 DDRGK1Q96HY6 314 aa17.58■□□□□ 0.4
CDH16-201ENST00000299752 UPF2Q9HAU5 1272 aaKnown RBP17.58■□□□□ 0.4
CDH16-201ENST00000299752 PAPPAQ13219 1627 aa17.57■□□□□ 0.4
CDH16-201ENST00000299752 NEXNQ0ZGT2 675 aa17.56■□□□□ 0.4
CDH16-201ENST00000299752 PPP1R42Q7Z4L9 355 aa17.56■□□□□ 0.4
CDH16-201ENST00000299752 LINS1Q8NG48 757 aa17.55■□□□□ 0.4
CDH16-201ENST00000299752 MFAP1P55081 439 aaKnown RBP17.55■□□□□ 0.4
CDH16-201ENST00000299752 GJD4Q96KN9 370 aaPredicted RBP17.55■□□□□ 0.4
CDH16-201ENST00000299752 METTL22Q9BUU2 404 aaPredicted RBP17.55■□□□□ 0.4
CDH16-201ENST00000299752 NEURL1BA8MQ27 555 aa17.55■□□□□ 0.4
CDH16-201ENST00000299752 SRGAP3O43295 1099 aa17.55■□□□□ 0.4
CDH16-201ENST00000299752 ZBTB1Q9Y2K1 713 aa17.55■□□□□ 0.4
CDH16-201ENST00000299752 LAMB4A4D0S4 1761 aa17.54■□□□□ 0.4
CDH16-201ENST00000299752 ALDH1L1O75891 902 aa17.54■□□□□ 0.4
CDH16-201ENST00000299752 SUCLG2Q96I99 432 aa17.54■□□□□ 0.4
CDH16-201ENST00000299752 GRM8O00222 908 aa17.53■□□□□ 0.4
CDH16-201ENST00000299752 STARD3NLO95772 234 aa17.53■□□□□ 0.4
CDH16-201ENST00000299752 ATP6V1AP38606 617 aa17.53■□□□□ 0.4
CDH16-201ENST00000299752 SLC4A3P48751 1232 aa17.53■□□□□ 0.4
CDH16-201ENST00000299752 GSPT1P15170 499 aaKnown RBP17.53■□□□□ 0.4
CDH16-201ENST00000299752 SMIM5Q71RC9 77 aa17.53■□□□□ 0.4
CDH16-201ENST00000299752 QTRT2Q9H974 415 aaKnown RBP17.53■□□□□ 0.4
CDH16-201ENST00000299752 UBE3BQ7Z3V4 1068 aa17.52■□□□□ 0.4
CDH16-201ENST00000299752 SSH3Q8TE77 659 aa17.52■□□□□ 0.4
CDH16-201ENST00000299752 TBC1D32Q96NH3 1257 aa17.52■□□□□ 0.4
CDH16-201ENST00000299752 CYP19A1P11511 503 aaPredicted RBP17.52■□□□□ 0.4
CDH16-201ENST00000299752 TSHZ3Q63HK5 1081 aa17.52■□□□□ 0.4
CDH16-201ENST00000299752 PLBD2Q8NHP8 589 aa17.52■□□□□ 0.4
CDH16-201ENST00000299752 GCKRQ14397 625 aa17.52■□□□□ 0.39
CDH16-201ENST00000299752 LRRCC1Q9C099 1032 aa17.52■□□□□ 0.39
CDH16-201ENST00000299752 PA2G4Q9UQ80 394 aaKnown RBP17.52■□□□□ 0.39
CDH16-201ENST00000299752 TTC22Q5TAA0 569 aa17.51■□□□□ 0.39
CDH16-201ENST00000299752 ANP32EQ9BTT0 268 aa17.51■□□□□ 0.39
CDH16-201ENST00000299752 BICC1Q9H694 974 aaKnown RBP17.51■□□□□ 0.39
CDH16-201ENST00000299752 IL1RAPL2Q9NP60 686 aa17.51■□□□□ 0.39
CDH16-201ENST00000299752 TBC1D2BQ9UPU7 963 aa17.51■□□□□ 0.39
CDH16-201ENST00000299752 SURF6O75683 361 aaKnown RBP17.51■□□□□ 0.39
CDH16-201ENST00000299752 KAZALD1Q96I82 304 aa17.51■□□□□ 0.39
CDH16-201ENST00000299752 IBTKQ9P2D0 1353 aaPredicted RBP17.51■□□□□ 0.39
CDH16-201ENST00000299752 A0A087WZG4 1122 aa17.5■□□□□ 0.39
CDH16-201ENST00000299752 LOC102724428A0A0B4J2F2 783 aa17.5■□□□□ 0.39
CDH16-201ENST00000299752 SIK1P57059 783 aa17.5■□□□□ 0.39
CDH16-201ENST00000299752 ITPK1Q13572 414 aa17.5■□□□□ 0.39
CDH16-201ENST00000299752 EPHA10Q5JZY3 1008 aa17.5■□□□□ 0.39
CDH16-201ENST00000299752 KLHDC4Q8TBB5 520 aa17.5■□□□□ 0.39
CDH16-201ENST00000299752 SEPT12Q8IYM1 358 aa17.5■□□□□ 0.39
CDH16-201ENST00000299752 GPTP24298 496 aa17.49■□□□□ 0.39
CDH16-201ENST00000299752 POLA2Q14181 598 aa17.49■□□□□ 0.39
CDH16-201ENST00000299752 DAXXQ9UER7 740 aaPredicted RBP17.49■□□□□ 0.39
CDH16-201ENST00000299752 PALLDQ8WX93 1383 aa17.49■□□□□ 0.39
CDH16-201ENST00000299752 ARFGEF2Q9Y6D5 1785 aa17.49■□□□□ 0.39
CDH16-201ENST00000299752 TBC1D9Q6ZT07 1266 aa17.49■□□□□ 0.39
CDH16-201ENST00000299752 VSIG10Q8N0Z9 540 aa17.49■□□□□ 0.39
CDH16-201ENST00000299752 HLFQ16534 295 aa17.49■□□□□ 0.39
CDH16-201ENST00000299752 C22orf23Q9BZE7 217 aa17.49■□□□□ 0.39
CDH16-201ENST00000299752 TRPC5Q9UL62 973 aaPredicted RBP17.49■□□□□ 0.39
CDH16-201ENST00000299752 SIL1Q9H173 461 aa17.48■□□□□ 0.39
CDH16-201ENST00000299752 AFDNP55196 1824 aaKnown RBP17.48■□□□□ 0.39
CDH16-201ENST00000299752 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.48■□□□□ 0.39
CDH16-201ENST00000299752 ERBB4Q15303 1308 aa17.48■□□□□ 0.39
CDH16-201ENST00000299752 TEX13AQ9BXU3 409 aaPredicted RBP17.48■□□□□ 0.39
CDH16-201ENST00000299752 PDE1AP54750 535 aa17.47■□□□□ 0.39
CDH16-201ENST00000299752 CHMP3Q9Y3E7 222 aa17.47■□□□□ 0.39
CDH16-201ENST00000299752 CRKLP46109 303 aaKnown RBP17.46■□□□□ 0.39
CDH16-201ENST00000299752 OS9Q13438 667 aaPredicted RBP17.46■□□□□ 0.39
CDH16-201ENST00000299752 KIF6Q6ZMV9 814 aa17.46■□□□□ 0.39
CDH16-201ENST00000299752 FAM177BA6PVY3 158 aa17.46■□□□□ 0.39
CDH16-201ENST00000299752 CDC45O75419 566 aa17.46■□□□□ 0.39
CDH16-201ENST00000299752 CCDC85AQ96PX6 553 aaPredicted RBP17.46■□□□□ 0.39
CDH16-201ENST00000299752 SYNE4Q8N205 404 aa17.46■□□□□ 0.38
CDH16-201ENST00000299752 SDSP20132 328 aa17.45■□□□□ 0.38
CDH16-201ENST00000299752 HDAC5Q9UQL6 1122 aa17.45■□□□□ 0.38
CDH16-201ENST00000299752 UTYO14607 1347 aa17.45■□□□□ 0.38
CDH16-201ENST00000299752 NUTM1Q86Y26 1132 aa17.45■□□□□ 0.38
CDH16-201ENST00000299752 RAB11FIP3O75154 756 aa17.44■□□□□ 0.38
CDH16-201ENST00000299752 MTX1Q13505 466 aa17.44■□□□□ 0.38
CDH16-201ENST00000299752 OSBPL3Q9H4L5 887 aa17.44■□□□□ 0.38
CDH16-201ENST00000299752 MX1P20591 662 aa17.44■□□□□ 0.38
CDH16-201ENST00000299752 INTS5Q6P9B9 1019 aaKnown RBP17.44■□□□□ 0.38
CDH16-201ENST00000299752 CWC25Q9NXE8 425 aaPredicted RBP17.44■□□□□ 0.38
CDH16-201ENST00000299752 SALL3Q9BXA9 1300 aa17.44■□□□□ 0.38
CDH16-201ENST00000299752 TJP1Q07157 1748 aa17.44■□□□□ 0.38
CDH16-201ENST00000299752 DZIP3Q86Y13 1208 aaKnown RBP17.43■□□□□ 0.38
CDH16-201ENST00000299752 RHPN1Q8TCX5 695 aa17.43■□□□□ 0.38
CDH16-201ENST00000299752 FAM89AQ96GI7 184 aa17.43■□□□□ 0.38
CDH16-201ENST00000299752 ATRNO75882 1429 aa17.43■□□□□ 0.38
CDH16-201ENST00000299752 CCDC87Q9NVE4 849 aa17.43■□□□□ 0.38
CDH16-201ENST00000299752 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.43■□□□□ 0.38
CDH16-201ENST00000299752 LINC00116Q8NCU8 138 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms