RNA–Protein interactions for RNA: ENST00000299596.8

TMEM41B-201, Transcript of transmembrane protein 41B, humanhuman

TSL 1 (best)

Gene TMEM41B, Length 1,443 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM41B-201ENST00000299596 KDM2BQ8NHM5 1336 aa18.24■□□□□ 0.51
TMEM41B-201ENST00000299596 STYK1Q6J9G0 422 aa18.23■□□□□ 0.51
TMEM41B-201ENST00000299596 CNKSR1Q969H4 720 aa18.23■□□□□ 0.51
TMEM41B-201ENST00000299596 RRP7AQ9Y3A4 280 aaKnown RBP18.23■□□□□ 0.51
TMEM41B-201ENST00000299596 ZC3H4Q9UPT8 1303 aaKnown RBP18.23■□□□□ 0.51
TMEM41B-201ENST00000299596 ERVV-1B6SEH8 477 aa18.23■□□□□ 0.51
TMEM41B-201ENST00000299596 TOMM70O94826 608 aa18.23■□□□□ 0.51
TMEM41B-201ENST00000299596 SRGNP10124 158 aa18.23■□□□□ 0.51
TMEM41B-201ENST00000299596 RASSF7Q02833 373 aa18.23■□□□□ 0.51
TMEM41B-201ENST00000299596 NGEFQ8N5V2 710 aa18.23■□□□□ 0.51
TMEM41B-201ENST00000299596 HLFQ16534 295 aa18.22■□□□□ 0.51
TMEM41B-201ENST00000299596 RUNDC1Q96C34 613 aa18.22■□□□□ 0.51
TMEM41B-201ENST00000299596 MASTLQ96GX5 879 aa18.22■□□□□ 0.51
TMEM41B-201ENST00000299596 PRKRIP1Q9H875 184 aaPredicted RBP18.22■□□□□ 0.51
TMEM41B-201ENST00000299596 NMRK2Q9NPI5 230 aa18.22■□□□□ 0.51
TMEM41B-201ENST00000299596 BCORQ6W2J9 1755 aa18.21■□□□□ 0.51
TMEM41B-201ENST00000299596 KDM3BQ7LBC6 1761 aa18.21■□□□□ 0.51
TMEM41B-201ENST00000299596 DLEC1Q9Y238 1755 aa18.21■□□□□ 0.51
TMEM41B-201ENST00000299596 ERBB4Q15303 1308 aa18.21■□□□□ 0.51
TMEM41B-201ENST00000299596 C21orf2O43822 256 aa18.21■□□□□ 0.51
TMEM41B-201ENST00000299596 HSPA6P17066 643 aa18.21■□□□□ 0.51
TMEM41B-201ENST00000299596 KIF6Q6ZMV9 814 aa18.21■□□□□ 0.51
TMEM41B-201ENST00000299596 CCDC146Q8IYE0 955 aa18.21■□□□□ 0.51
TMEM41B-201ENST00000299596 CEP350Q5VT06 3117 aa18.2■□□□□ 0.5
TMEM41B-201ENST00000299596 MAP3K15Q6ZN16 1313 aa18.2■□□□□ 0.5
TMEM41B-201ENST00000299596 KLRG2A4D1S0 409 aaPredicted RBP18.2■□□□□ 0.5
TMEM41B-201ENST00000299596 NFKBIEO00221 500 aa18.2■□□□□ 0.5
TMEM41B-201ENST00000299596 MYL6BP14649 208 aa18.2■□□□□ 0.5
TMEM41B-201ENST00000299596 NEUROD2Q15784 382 aa18.2■□□□□ 0.5
TMEM41B-201ENST00000299596 ADAMTS8Q9UP79 889 aa18.2■□□□□ 0.5
TMEM41B-201ENST00000299596 GTF2E1P29083 439 aaPredicted RBP18.19■□□□□ 0.5
TMEM41B-201ENST00000299596 SOGA3Q5TF21 947 aa18.19■□□□□ 0.5
TMEM41B-201ENST00000299596 ANKRD31Q8N7Z5 1873 aa18.19■□□□□ 0.5
TMEM41B-201ENST00000299596 LAMB4A4D0S4 1761 aa18.18■□□□□ 0.5
TMEM41B-201ENST00000299596 FAM177BA6PVY3 158 aa18.18■□□□□ 0.5
TMEM41B-201ENST00000299596 NPR1P16066 1061 aa18.18■□□□□ 0.5
TMEM41B-201ENST00000299596 PRPF40BQ6NWY9 871 aaKnown RBP18.18■□□□□ 0.5
TMEM41B-201ENST00000299596 TTLL7Q6ZT98 887 aa18.18■□□□□ 0.5
TMEM41B-201ENST00000299596 C16orf71Q8IYS4 520 aaPredicted RBP18.18■□□□□ 0.5
TMEM41B-201ENST00000299596 NYXQ9GZU5 481 aa18.18■□□□□ 0.5
TMEM41B-201ENST00000299596 ZNF219Q9P2Y4 722 aaPredicted RBP18.18■□□□□ 0.5
TMEM41B-201ENST00000299596 PRELPP51888 382 aa18.17■□□□□ 0.5
TMEM41B-201ENST00000299596 EIF2S2P20042 333 aaKnown RBP18.16■□□□□ 0.5
TMEM41B-201ENST00000299596 RRAGCQ9HB90 399 aa18.16■□□□□ 0.5
TMEM41B-201ENST00000299596 LTBP3Q9NS15 1303 aa18.16■□□□□ 0.5
TMEM41B-201ENST00000299596 GLTPD2A6NH11 291 aa18.15■□□□□ 0.5
TMEM41B-201ENST00000299596 CHL1O00533 1208 aa18.15■□□□□ 0.5
TMEM41B-201ENST00000299596 RBM46Q8TBY0 533 aaKnown RBP18.15■□□□□ 0.5
TMEM41B-201ENST00000299596 ZBTB3Q9H5J0 574 aa18.15■□□□□ 0.5
TMEM41B-201ENST00000299596 TRIM35Q9UPQ4 493 aa18.15■□□□□ 0.5
TMEM41B-201ENST00000299596 SBF1O95248 1867 aa18.15■□□□□ 0.5
TMEM41B-201ENST00000299596 ALDH1B1P30837 517 aa18.15■□□□□ 0.5
TMEM41B-201ENST00000299596 ZEB1P37275 1124 aaPredicted RBP18.15■□□□□ 0.5
TMEM41B-201ENST00000299596 PDIA6Q15084 440 aa18.15■□□□□ 0.5
TMEM41B-201ENST00000299596 GIGYF2Q6Y7W6 1299 aaKnown RBP18.15■□□□□ 0.5
TMEM41B-201ENST00000299596 TAOK3Q9H2K8 898 aa18.15■□□□□ 0.5
TMEM41B-201ENST00000299596 DPY19L2Q6NUT2 758 aa18.14■□□□□ 0.49
TMEM41B-201ENST00000299596 C7orf43Q8WVR3 580 aa18.14■□□□□ 0.49
TMEM41B-201ENST00000299596 COL11A2P13942 1736 aaPredicted RBP18.13■□□□□ 0.49
TMEM41B-201ENST00000299596 ERFEQ4G0M1 354 aa18.13■□□□□ 0.49
TMEM41B-201ENST00000299596 LRP10Q7Z4F1 713 aa18.13■□□□□ 0.49
TMEM41B-201ENST00000299596 ZNF34Q8IZ26 560 aa18.13■□□□□ 0.49
TMEM41B-201ENST00000299596 LAS1LQ9Y4W2 734 aaKnown RBP18.13■□□□□ 0.49
TMEM41B-201ENST00000299596 IBTKQ9P2D0 1353 aaPredicted RBP18.12■□□□□ 0.49
TMEM41B-201ENST00000299596 VEGFAP15692 232 aaPredicted RBP18.12■□□□□ 0.49
TMEM41B-201ENST00000299596 GPTP24298 496 aa18.12■□□□□ 0.49
TMEM41B-201ENST00000299596 APLP1P51693 650 aa18.12■□□□□ 0.49
TMEM41B-201ENST00000299596 FSTL1Q12841 308 aa18.12■□□□□ 0.49
TMEM41B-201ENST00000299596 CCDC93Q567U6 631 aa18.12■□□□□ 0.49
TMEM41B-201ENST00000299596 NUTM1Q86Y26 1132 aa18.12■□□□□ 0.49
TMEM41B-201ENST00000299596 PARP10Q53GL7 1025 aa18.11■□□□□ 0.49
TMEM41B-201ENST00000299596 SUSD4Q5VX71 490 aa18.11■□□□□ 0.49
TMEM41B-201ENST00000299596 PPP1R42Q7Z4L9 355 aa18.11■□□□□ 0.49
TMEM41B-201ENST00000299596 UBN2Q6ZU65 1347 aa18.11■□□□□ 0.49
TMEM41B-201ENST00000299596 PROSER3Q2NL68 480 aa18.1■□□□□ 0.49
TMEM41B-201ENST00000299596 CRY2Q49AN0 593 aa18.1■□□□□ 0.49
TMEM41B-201ENST00000299596 RTKN2Q8IZC4 609 aa18.1■□□□□ 0.49
TMEM41B-201ENST00000299596 CFAP44Q96MT7 982 aa18.1■□□□□ 0.49
TMEM41B-201ENST00000299596 SLX4Q8IY92 1834 aa18.1■□□□□ 0.49
TMEM41B-201ENST00000299596 HOXB7P09629 217 aa18.09■□□□□ 0.49
TMEM41B-201ENST00000299596 COPS6Q7L5N1 327 aa18.09■□□□□ 0.49
TMEM41B-201ENST00000299596 NECTIN2Q92692 538 aa18.09■□□□□ 0.49
TMEM41B-201ENST00000299596 DDX21Q9NR30 783 aaKnown RBP eCLIP18.09■□□□□ 0.49
TMEM41B-201ENST00000299596 ANXA1P04083 346 aa18.08■□□□□ 0.49
TMEM41B-201ENST00000299596 HSP90AB3PQ58FF7 597 aa18.08■□□□□ 0.49
TMEM41B-201ENST00000299596 RPGRQ92834 1020 aaKnown RBP18.08■□□□□ 0.49
TMEM41B-201ENST00000299596 ABCC12Q96J65 1359 aa18.08■□□□□ 0.48
TMEM41B-201ENST00000299596 RIC1Q4ADV7 1423 aa18.08■□□□□ 0.48
TMEM41B-201ENST00000299596 FER1L6Q2WGJ9 1857 aa18.08■□□□□ 0.48
TMEM41B-201ENST00000299596 APAF1O14727 1248 aa18.07■□□□□ 0.48
TMEM41B-201ENST00000299596 NTSR2O95665 410 aa18.07■□□□□ 0.48
TMEM41B-201ENST00000299596 HOXA10P31260 410 aaPredicted RBP18.07■□□□□ 0.48
TMEM41B-201ENST00000299596 FKBP4Q02790 459 aaKnown RBP eCLIP18.07■□□□□ 0.48
TMEM41B-201ENST00000299596 CALD1Q05682 793 aaKnown RBP18.07■□□□□ 0.48
TMEM41B-201ENST00000299596 AIMP1Q12904 312 aaKnown RBP18.07■□□□□ 0.48
TMEM41B-201ENST00000299596 KRT24Q2M2I5 525 aa18.07■□□□□ 0.48
TMEM41B-201ENST00000299596 SMC1BQ8NDV3 1235 aa18.07■□□□□ 0.48
TMEM41B-201ENST00000299596 XAGE3Q8WTP9 111 aa18.07■□□□□ 0.48
TMEM41B-201ENST00000299596 NUP98P52948 1817 aa18.07■□□□□ 0.48
TMEM41B-201ENST00000299596 TNRC6CQ9HCJ0 1690 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms