RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 LARGE1O95461 756 aa16.46■□□□□ 0.23
BCCIP-202ENST00000299130 TTC41PQ6P2S7 1318 aa16.45■□□□□ 0.22
BCCIP-202ENST00000299130 GLRX3O76003 335 aaKnown RBP16.45■□□□□ 0.22
BCCIP-202ENST00000299130 MBD3O95983 291 aa16.45■□□□□ 0.22
BCCIP-202ENST00000299130 AIMP1Q12904 312 aaKnown RBP16.45■□□□□ 0.22
BCCIP-202ENST00000299130 USP48Q86UV5 1035 aa16.45■□□□□ 0.22
BCCIP-202ENST00000299130 ZSCAN30Q86W11 494 aa16.45■□□□□ 0.22
BCCIP-202ENST00000299130 CLASRPQ8N2M8 674 aaKnown RBP16.45■□□□□ 0.22
BCCIP-202ENST00000299130 RNF214Q8ND24 703 aa16.45■□□□□ 0.22
BCCIP-202ENST00000299130 SUCLG2Q96I99 432 aa16.45■□□□□ 0.22
BCCIP-202ENST00000299130 NCAPD2Q15021 1401 aa16.45■□□□□ 0.22
BCCIP-202ENST00000299130 ALDH1L1O75891 902 aa16.45■□□□□ 0.22
BCCIP-202ENST00000299130 ADCK5Q3MIX3 580 aa16.45■□□□□ 0.22
BCCIP-202ENST00000299130 KIAA1211Q6ZU35 1233 aa16.45■□□□□ 0.22
BCCIP-202ENST00000299130 DDX54Q8TDD1 881 aaKnown RBP16.45■□□□□ 0.22
BCCIP-202ENST00000299130 PDLIM2Q96JY6 352 aa16.45■□□□□ 0.22
BCCIP-202ENST00000299130 DIAPH3Q9NSV4 1193 aa16.44■□□□□ 0.22
BCCIP-202ENST00000299130 ECHDC1Q9NTX5 307 aa16.44■□□□□ 0.22
BCCIP-202ENST00000299130 CASTP20810 708 aaKnown RBP16.44■□□□□ 0.22
BCCIP-202ENST00000299130 WDR33Q9C0J8 1336 aaKnown RBP16.43■□□□□ 0.22
BCCIP-202ENST00000299130 TCHHQ07283 1943 aa16.43■□□□□ 0.22
BCCIP-202ENST00000299130 SASH1O94885 1247 aa16.43■□□□□ 0.22
BCCIP-202ENST00000299130 SLC39A6Q13433 755 aa16.43■□□□□ 0.22
BCCIP-202ENST00000299130 PDIA6Q15084 440 aa16.43■□□□□ 0.22
BCCIP-202ENST00000299130 TPRNQ4KMQ1 711 aa16.43■□□□□ 0.22
BCCIP-202ENST00000299130 AACSQ86V21 672 aa16.43■□□□□ 0.22
BCCIP-202ENST00000299130 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.43■□□□□ 0.22
BCCIP-202ENST00000299130 SLIT3O75094 1523 aa16.43■□□□□ 0.22
BCCIP-202ENST00000299130 IFIT2P09913 472 aaKnown RBP16.42■□□□□ 0.22
BCCIP-202ENST00000299130 COL9A3Q14050 684 aaPredicted RBP16.42■□□□□ 0.22
BCCIP-202ENST00000299130 PRPF40BQ6NWY9 871 aaKnown RBP16.42■□□□□ 0.22
BCCIP-202ENST00000299130 CHMP4AQ9BY43 222 aa16.42■□□□□ 0.22
BCCIP-202ENST00000299130 BICC1Q9H694 974 aaKnown RBP16.42■□□□□ 0.22
BCCIP-202ENST00000299130 LIMCH1Q9UPQ0 1083 aa16.42■□□□□ 0.22
BCCIP-202ENST00000299130 CNPY2Q9Y2B0 182 aa16.42■□□□□ 0.22
BCCIP-202ENST00000299130 TLR7Q9NYK1 1049 aaKnown RBP16.42■□□□□ 0.22
BCCIP-202ENST00000299130 KLHDC4Q8TBB5 520 aa16.41■□□□□ 0.22
BCCIP-202ENST00000299130 EAF2Q96CJ1 260 aaPredicted RBP16.41■□□□□ 0.22
BCCIP-202ENST00000299130 CCDC8Q9H0W5 538 aaPredicted RBP16.41■□□□□ 0.22
BCCIP-202ENST00000299130 HYPKQ9NX55 129 aa16.41■□□□□ 0.22
BCCIP-202ENST00000299130 RGPD5Q99666 1765 aa16.41■□□□□ 0.22
BCCIP-202ENST00000299130 GRM8O00222 908 aa16.41■□□□□ 0.22
BCCIP-202ENST00000299130 IGKV5-2P06315 115 aa16.41■□□□□ 0.22
BCCIP-202ENST00000299130 SYT1P21579 422 aa16.41■□□□□ 0.22
BCCIP-202ENST00000299130 FAM227BQ96M60 508 aa16.41■□□□□ 0.22
BCCIP-202ENST00000299130 SIPA1L3O60292 1781 aaPredicted RBP16.41■□□□□ 0.22
BCCIP-202ENST00000299130 LINS1Q8NG48 757 aa16.4■□□□□ 0.22
BCCIP-202ENST00000299130 JAKMIP1Q96N16 626 aaKnown RBP16.4■□□□□ 0.22
BCCIP-202ENST00000299130 ZSCAN22P10073 491 aaPredicted RBP16.4■□□□□ 0.22
BCCIP-202ENST00000299130 ZC3H6P61129 1189 aaKnown RBP16.4■□□□□ 0.22
BCCIP-202ENST00000299130 ST3GAL1Q11201 340 aa16.4■□□□□ 0.22
BCCIP-202ENST00000299130 SIL1Q9H173 461 aa16.4■□□□□ 0.22
BCCIP-202ENST00000299130 DDX21Q9NR30 783 aaKnown RBP eCLIP16.4■□□□□ 0.22
BCCIP-202ENST00000299130 OVOS2A0A0G2JMS6 1433 aa16.39■□□□□ 0.21
BCCIP-202ENST00000299130 TRHP20396 242 aaPredicted RBP16.39■□□□□ 0.21
BCCIP-202ENST00000299130 KRT28Q7Z3Y7 464 aa16.39■□□□□ 0.21
BCCIP-202ENST00000299130 CCDC83Q8IWF9 413 aa16.39■□□□□ 0.21
BCCIP-202ENST00000299130 STX6O43752 255 aa16.39■□□□□ 0.21
BCCIP-202ENST00000299130 MYL6BP14649 208 aa16.39■□□□□ 0.21
BCCIP-202ENST00000299130 MSNP26038 577 aaKnown RBP16.39■□□□□ 0.21
BCCIP-202ENST00000299130 NECTIN1Q15223 517 aa16.39■□□□□ 0.21
BCCIP-202ENST00000299130 RUFY2Q8WXA3 655 aa16.39■□□□□ 0.21
BCCIP-202ENST00000299130 EVI5LQ96CN4 794 aa16.39■□□□□ 0.21
BCCIP-202ENST00000299130 TSPY26PQ9H489 355 aa16.39■□□□□ 0.21
BCCIP-202ENST00000299130 PDRG1Q9NUG6 133 aa16.39■□□□□ 0.21
BCCIP-202ENST00000299130 UTYO14607 1347 aa16.38■□□□□ 0.21
BCCIP-202ENST00000299130 CAMTA1Q9Y6Y1 1673 aa16.38■□□□□ 0.21
BCCIP-202ENST00000299130 NMIQ13287 307 aaPredicted RBP16.38■□□□□ 0.21
BCCIP-202ENST00000299130 EPHA10Q5JZY3 1008 aa16.38■□□□□ 0.21
BCCIP-202ENST00000299130 ERC1Q8IUD2 1116 aa16.38■□□□□ 0.21
BCCIP-202ENST00000299130 JARID2Q92833 1246 aaPredicted RBP16.38■□□□□ 0.21
BCCIP-202ENST00000299130 SMC3Q9UQE7 1217 aa16.38■□□□□ 0.21
BCCIP-202ENST00000299130 PIP4K2AP48426 406 aaPredicted RBP16.37■□□□□ 0.21
BCCIP-202ENST00000299130 KCNB2Q92953 911 aa16.37■□□□□ 0.21
BCCIP-202ENST00000299130 ZSWIM6Q9HCJ5 1215 aa16.37■□□□□ 0.21
BCCIP-202ENST00000299130 NOL7Q9UMY1 257 aaKnown RBP16.37■□□□□ 0.21
BCCIP-202ENST00000299130 TRPM3Q9HCF6 1732 aaPredicted RBP16.37■□□□□ 0.21
BCCIP-202ENST00000299130 G3BP1Q13283 466 aaKnown RBP eCLIP16.37■□□□□ 0.21
BCCIP-202ENST00000299130 GPATCH3Q96I76 525 aa16.37■□□□□ 0.21
BCCIP-202ENST00000299130 BOLA2Q9H3K6 86 aa16.37■□□□□ 0.21
BCCIP-202ENST00000299130 RBM8AQ9Y5S9 174 aaKnown RBP16.37■□□□□ 0.21
BCCIP-202ENST00000299130 CCDC171Q6TFL3 1326 aa16.37■□□□□ 0.21
BCCIP-202ENST00000299130 C5P01031 1676 aa16.37■□□□□ 0.21
BCCIP-202ENST00000299130 ZNF142P52746 1687 aaPredicted RBP16.37■□□□□ 0.21
BCCIP-202ENST00000299130 F13A1P00488 732 aa16.36■□□□□ 0.21
BCCIP-202ENST00000299130 GJB2P29033 226 aa16.36■□□□□ 0.21
BCCIP-202ENST00000299130 HS1BP3Q53T59 392 aa16.36■□□□□ 0.21
BCCIP-202ENST00000299130 ZNF790Q6PG37 636 aa16.36■□□□□ 0.21
BCCIP-202ENST00000299130 RIC3Q7Z5B4 369 aa16.36■□□□□ 0.21
BCCIP-202ENST00000299130 NECAB1Q8N987 351 aa16.36■□□□□ 0.21
BCCIP-202ENST00000299130 TMEM87AQ8NBN3 555 aa16.36■□□□□ 0.21
BCCIP-202ENST00000299130 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.36■□□□□ 0.21
BCCIP-202ENST00000299130 TAF6LQ9Y6J9 622 aa16.36■□□□□ 0.21
BCCIP-202ENST00000299130 ERBB3P21860 1342 aa16.36■□□□□ 0.21
BCCIP-202ENST00000299130 KDM6AO15550 1401 aaPredicted RBP16.36■□□□□ 0.21
BCCIP-202ENST00000299130 NPHP4O75161 1426 aaPredicted RBP16.36■□□□□ 0.21
BCCIP-202ENST00000299130 ME3Q16798 604 aa16.36■□□□□ 0.21
BCCIP-202ENST00000299130 VPS53Q5VIR6 699 aa16.36■□□□□ 0.21
BCCIP-202ENST00000299130 NFATC2IPQ8NCF5 419 aa16.36■□□□□ 0.21
BCCIP-202ENST00000299130 ADAMTS7Q9UKP4 1686 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms