RNA–Protein interactions for RNA: ENST00000297668.10

CNTNAP3-201, Transcript of contactin associated protein like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTNAP3, Length 5,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-201ENST00000297668 GOLIM4O00461 696 aa19.44■□□□□ 0.7
CNTNAP3-201ENST00000297668 USO1O60763 962 aaKnown RBP19.44■□□□□ 0.7
CNTNAP3-201ENST00000297668 YEATS4O95619 227 aa19.44■□□□□ 0.7
CNTNAP3-201ENST00000297668 PTPN23Q9H3S7 1636 aa19.43■□□□□ 0.7
CNTNAP3-201ENST00000297668 PCF11O94913 1555 aaKnown RBP19.43■□□□□ 0.7
CNTNAP3-201ENST00000297668 IARSP41252 1262 aaKnown RBP19.43■□□□□ 0.7
CNTNAP3-201ENST00000297668 IDI1Q13907 227 aa19.43■□□□□ 0.7
CNTNAP3-201ENST00000297668 LUZP1Q86V48 1076 aa19.43■□□□□ 0.7
CNTNAP3-201ENST00000297668 CGNQ9P2M7 1197 aaKnown RBP19.43■□□□□ 0.7
CNTNAP3-201ENST00000297668 NLRP5P59047 1200 aa19.43■□□□□ 0.7
CNTNAP3-201ENST00000297668 TMEM266Q2M3C6 531 aa19.43■□□□□ 0.7
CNTNAP3-201ENST00000297668 MAP3K2Q9Y2U5 619 aa19.43■□□□□ 0.7
CNTNAP3-201ENST00000297668 SHTN1A0MZ66 631 aa19.43■□□□□ 0.7
CNTNAP3-201ENST00000297668 CAVIN2O95810 425 aa19.43■□□□□ 0.7
CNTNAP3-201ENST00000297668 AEBP2Q6ZN18 517 aaPredicted RBP19.43■□□□□ 0.7
CNTNAP3-201ENST00000297668 RPRD2Q5VT52 1461 aaKnown RBP19.43■□□□□ 0.7
CNTNAP3-201ENST00000297668 FOXO3O43524 673 aa19.43■□□□□ 0.7
CNTNAP3-201ENST00000297668 TMC6Q7Z403 805 aa19.43■□□□□ 0.7
CNTNAP3-201ENST00000297668 NEK1Q96PY6 1258 aa19.43■□□□□ 0.7
CNTNAP3-201ENST00000297668 ORC3Q9UBD5 711 aaPredicted RBP19.43■□□□□ 0.7
CNTNAP3-201ENST00000297668 TNIP1Q15025 636 aa19.42■□□□□ 0.7
CNTNAP3-201ENST00000297668 PI4KAP2A4QPH2 592 aa19.42■□□□□ 0.7
CNTNAP3-201ENST00000297668 CATIPQ7Z7H3 387 aa19.42■□□□□ 0.7
CNTNAP3-201ENST00000297668 PI4KAP1Q8N8J0 262 aa19.42■□□□□ 0.7
CNTNAP3-201ENST00000297668 KIF20AO95235 890 aa19.42■□□□□ 0.7
CNTNAP3-201ENST00000297668 SF3B2Q13435 895 aaKnown RBP19.42■□□□□ 0.7
CNTNAP3-201ENST00000297668 HDAC1Q13547 482 aaPredicted RBP19.42■□□□□ 0.7
CNTNAP3-201ENST00000297668 TSHZ3Q63HK5 1081 aa19.42■□□□□ 0.7
CNTNAP3-201ENST00000297668 UBA5Q9GZZ9 404 aa19.42■□□□□ 0.7
CNTNAP3-201ENST00000297668 HMG20BQ9P0W2 317 aa19.42■□□□□ 0.7
CNTNAP3-201ENST00000297668 UVSSAQ2YD98 709 aa19.42■□□□□ 0.7
CNTNAP3-201ENST00000297668 TDRD12Q587J7 1177 aaKnown RBP19.41■□□□□ 0.7
CNTNAP3-201ENST00000297668 AMOTL2Q9Y2J4 779 aa19.41■□□□□ 0.7
CNTNAP3-201ENST00000297668 ZPR1O75312 459 aa19.41■□□□□ 0.7
CNTNAP3-201ENST00000297668 ZBTB3Q9H5J0 574 aa19.41■□□□□ 0.7
CNTNAP3-201ENST00000297668 RBM27Q9P2N5 1060 aaKnown RBP19.41■□□□□ 0.7
CNTNAP3-201ENST00000297668 FAM83GA6ND36 823 aa19.41■□□□□ 0.7
CNTNAP3-201ENST00000297668 ARHGAP45Q92619 1136 aa19.41■□□□□ 0.7
CNTNAP3-201ENST00000297668 DNMBPQ6XZF7 1577 aa19.4■□□□□ 0.7
CNTNAP3-201ENST00000297668 PIK3R4Q99570 1358 aa19.4■□□□□ 0.7
CNTNAP3-201ENST00000297668 DYDC1Q8WWB3 177 aa19.4■□□□□ 0.7
CNTNAP3-201ENST00000297668 ANKIB1Q9P2G1 1089 aa19.4■□□□□ 0.7
CNTNAP3-201ENST00000297668 DHX37Q8IY37 1157 aaKnown RBP19.4■□□□□ 0.7
CNTNAP3-201ENST00000297668 SNRKQ9NRH2 765 aa19.4■□□□□ 0.7
CNTNAP3-201ENST00000297668 NUCB1Q02818 461 aa19.4■□□□□ 0.7
CNTNAP3-201ENST00000297668 MAPK8IP2Q13387 824 aaPredicted RBP19.4■□□□□ 0.7
CNTNAP3-201ENST00000297668 LDHAL6AQ6ZMR3 332 aa19.4■□□□□ 0.7
CNTNAP3-201ENST00000297668 TMX3Q96JJ7 454 aa19.4■□□□□ 0.7
CNTNAP3-201ENST00000297668 UBE3BQ7Z3V4 1068 aa19.39■□□□□ 0.69
CNTNAP3-201ENST00000297668 IQGAP2Q13576 1575 aa19.39■□□□□ 0.69
CNTNAP3-201ENST00000297668 TMEM67Q5HYA8 995 aa19.39■□□□□ 0.69
CNTNAP3-201ENST00000297668 DISP3Q9P2K9 1392 aa19.39■□□□□ 0.69
CNTNAP3-201ENST00000297668 DNA2P51530 1060 aa19.39■□□□□ 0.69
CNTNAP3-201ENST00000297668 TTF1Q15361 905 aaPredicted RBP19.39■□□□□ 0.69
CNTNAP3-201ENST00000297668 CCDC96Q2M329 555 aa19.39■□□□□ 0.69
CNTNAP3-201ENST00000297668 CCDC113Q9H0I3 377 aa19.39■□□□□ 0.69
CNTNAP3-201ENST00000297668 HCLS1P14317 486 aaPredicted RBP19.39■□□□□ 0.69
CNTNAP3-201ENST00000297668 MTIF2P46199 727 aaKnown RBP19.39■□□□□ 0.69
CNTNAP3-201ENST00000297668 MICU3Q86XE3 530 aa19.39■□□□□ 0.69
CNTNAP3-201ENST00000297668 RHPN1Q8TCX5 695 aa19.39■□□□□ 0.69
CNTNAP3-201ENST00000297668 C14orf93Q9H972 538 aaKnown RBP19.39■□□□□ 0.69
CNTNAP3-201ENST00000297668 PANK2Q9BZ23 570 aa19.38■□□□□ 0.69
CNTNAP3-201ENST00000297668 HAND2P61296 217 aa19.38■□□□□ 0.69
CNTNAP3-201ENST00000297668 CCDC102BQ68D86 513 aa19.38■□□□□ 0.69
CNTNAP3-201ENST00000297668 GOLGA6L9A6NEM1 432 aa19.38■□□□□ 0.69
CNTNAP3-201ENST00000297668 SDSP20132 328 aa19.38■□□□□ 0.69
CNTNAP3-201ENST00000297668 GPTP24298 496 aa19.38■□□□□ 0.69
CNTNAP3-201ENST00000297668 HMGB2P26583 209 aaKnown RBP19.38■□□□□ 0.69
CNTNAP3-201ENST00000297668 ZSCAN16Q9H4T2 348 aaPredicted RBP19.38■□□□□ 0.69
CNTNAP3-201ENST00000297668 PRDM10Q9NQV6 1147 aa19.38■□□□□ 0.69
CNTNAP3-201ENST00000297668 HMGXB3Q12766 1538 aa19.37■□□□□ 0.69
CNTNAP3-201ENST00000297668 ZSCAN23Q3MJ62 389 aa19.37■□□□□ 0.69
CNTNAP3-201ENST00000297668 CCDC178Q5BJE1 867 aa19.37■□□□□ 0.69
CNTNAP3-201ENST00000297668 TCP11L1Q9NUJ3 509 aa19.37■□□□□ 0.69
CNTNAP3-201ENST00000297668 ATP5J2-PTCD1G3V325 749 aa19.37■□□□□ 0.69
CNTNAP3-201ENST00000297668 POLR3GO15318 223 aaPredicted RBP19.37■□□□□ 0.69
CNTNAP3-201ENST00000297668 SNW1Q13573 536 aaKnown RBP19.37■□□□□ 0.69
CNTNAP3-201ENST00000297668 NCOA7Q8NI08 942 aa19.37■□□□□ 0.69
CNTNAP3-201ENST00000297668 PCDHB15Q9Y5E8 787 aa19.37■□□□□ 0.69
CNTNAP3-201ENST00000297668 CD109Q6YHK3 1445 aa19.37■□□□□ 0.69
CNTNAP3-201ENST00000297668 PLB1Q6P1J6 1458 aa19.37■□□□□ 0.69
CNTNAP3-201ENST00000297668 MAP3K1Q13233 1512 aa19.37■□□□□ 0.69
CNTNAP3-201ENST00000297668 IFFO1Q0D2I5 559 aa19.37■□□□□ 0.69
CNTNAP3-201ENST00000297668 FBXO31Q5XUX0 539 aaPredicted RBP19.37■□□□□ 0.69
CNTNAP3-201ENST00000297668 NOS1P29475 1434 aa19.37■□□□□ 0.69
CNTNAP3-201ENST00000297668 ZSCAN22P10073 491 aaPredicted RBP19.36■□□□□ 0.69
CNTNAP3-201ENST00000297668 INCENPQ9NQS7 918 aa19.36■□□□□ 0.69
CNTNAP3-201ENST00000297668 CWC25Q9NXE8 425 aaPredicted RBP19.36■□□□□ 0.69
CNTNAP3-201ENST00000297668 FAM135AQ9P2D6 1515 aa19.36■□□□□ 0.69
CNTNAP3-201ENST00000297668 IDEP14735 1019 aa19.36■□□□□ 0.69
CNTNAP3-201ENST00000297668 METAP2P50579 478 aaKnown RBP eCLIP19.36■□□□□ 0.69
CNTNAP3-201ENST00000297668 MAP2K1Q02750 393 aaPredicted RBP19.36■□□□□ 0.69
CNTNAP3-201ENST00000297668 GSTTP1A0A1W2PQM5 241 aa19.36■□□□□ 0.69
CNTNAP3-201ENST00000297668 NEBLO76041 1014 aa19.36■□□□□ 0.69
CNTNAP3-201ENST00000297668 UBA7P41226 1012 aa19.36■□□□□ 0.69
CNTNAP3-201ENST00000297668 KANK3Q6NY19 840 aa19.36■□□□□ 0.69
CNTNAP3-201ENST00000297668 LRSAM1Q6UWE0 723 aa19.36■□□□□ 0.69
CNTNAP3-201ENST00000297668 CCDC144CPQ8IYA2 1237 aa19.36■□□□□ 0.69
CNTNAP3-201ENST00000297668 ANKRD36BQ8N2N9 1353 aa19.36■□□□□ 0.69
CNTNAP3-201ENST00000297668 ABCA10Q8WWZ4 1543 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms