RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 PLBD2Q8NHP8 589 aa16.79■□□□□ 0.28
CHMP4C-201ENST00000297265 RHPN1Q8TCX5 695 aa16.79■□□□□ 0.28
CHMP4C-201ENST00000297265 KIF2CQ99661 725 aa16.79■□□□□ 0.28
CHMP4C-201ENST00000297265 BICC1Q9H694 974 aaKnown RBP16.79■□□□□ 0.28
CHMP4C-201ENST00000297265 IL1RAPL2Q9NP60 686 aa16.79■□□□□ 0.28
CHMP4C-201ENST00000297265 ATG3Q9NT62 314 aa16.79■□□□□ 0.28
CHMP4C-201ENST00000297265 SPATA31A1Q5TZJ5 1347 aa16.78■□□□□ 0.28
CHMP4C-201ENST00000297265 EXOC5O00471 708 aa16.78■□□□□ 0.28
CHMP4C-201ENST00000297265 MX1P20591 662 aa16.78■□□□□ 0.28
CHMP4C-201ENST00000297265 NEXNQ0ZGT2 675 aa16.78■□□□□ 0.28
CHMP4C-201ENST00000297265 EPHA10Q5JZY3 1008 aa16.78■□□□□ 0.28
CHMP4C-201ENST00000297265 TTLL7Q6ZT98 887 aa16.78■□□□□ 0.28
CHMP4C-201ENST00000297265 BCL9O00512 1426 aa16.77■□□□□ 0.28
CHMP4C-201ENST00000297265 NUP188Q5SRE5 1749 aa16.77■□□□□ 0.28
CHMP4C-201ENST00000297265 LRP6O75581 1613 aa16.77■□□□□ 0.28
CHMP4C-201ENST00000297265 CASP7P55210 303 aa16.76■□□□□ 0.27
CHMP4C-201ENST00000297265 KIF1BPQ96EK5 621 aa16.76■□□□□ 0.27
CHMP4C-201ENST00000297265 SLC4A9Q96Q91 983 aa16.76■□□□□ 0.27
CHMP4C-201ENST00000297265 TBC1D2Q9BYX2 928 aa16.76■□□□□ 0.27
CHMP4C-201ENST00000297265 PA2G4Q9UQ80 394 aaKnown RBP16.76■□□□□ 0.27
CHMP4C-201ENST00000297265 AFDNP55196 1824 aaKnown RBP16.76■□□□□ 0.27
CHMP4C-201ENST00000297265 VSIG10Q8N0Z9 540 aa16.76■□□□□ 0.27
CHMP4C-201ENST00000297265 HDAC5Q9UQL6 1122 aa16.76■□□□□ 0.27
CHMP4C-201ENST00000297265 SLIT2O94813 1529 aa16.75■□□□□ 0.27
CHMP4C-201ENST00000297265 ATP5J2-PTCD1G3V325 749 aa16.75■□□□□ 0.27
CHMP4C-201ENST00000297265 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.75■□□□□ 0.27
CHMP4C-201ENST00000297265 ILDR2Q71H61 639 aa16.74■□□□□ 0.27
CHMP4C-201ENST00000297265 NUTM1Q86Y26 1132 aa16.74■□□□□ 0.27
CHMP4C-201ENST00000297265 JARID2Q92833 1246 aaPredicted RBP16.74■□□□□ 0.27
CHMP4C-201ENST00000297265 THRAP3Q9Y2W1 955 aaKnown RBP16.74■□□□□ 0.27
CHMP4C-201ENST00000297265 COL15A1P39059 1388 aa16.74■□□□□ 0.27
CHMP4C-201ENST00000297265 NUTM2BA6NNL0 878 aaPredicted RBP16.73■□□□□ 0.27
CHMP4C-201ENST00000297265 NUTM2EB1AL46 878 aaPredicted RBP16.73■□□□□ 0.27
CHMP4C-201ENST00000297265 UNC5CLQ8IV45 518 aa16.73■□□□□ 0.27
CHMP4C-201ENST00000297265 NUTM2AQ8IVF1 878 aaPredicted RBP16.73■□□□□ 0.27
CHMP4C-201ENST00000297265 DNAJC10Q8IXB1 793 aa16.73■□□□□ 0.27
CHMP4C-201ENST00000297265 PI4K2BQ8TCG2 481 aa16.73■□□□□ 0.27
CHMP4C-201ENST00000297265 NWD2Q9ULI1 1742 aa16.73■□□□□ 0.27
CHMP4C-201ENST00000297265 AOX1Q06278 1338 aa16.73■□□□□ 0.27
CHMP4C-201ENST00000297265 SPATA31A5Q5VU36 1347 aa16.73■□□□□ 0.27
CHMP4C-201ENST00000297265 SPATA31A7Q8IWB4 1347 aa16.73■□□□□ 0.27
CHMP4C-201ENST00000297265 HSP90AB4PQ58FF6 505 aa16.73■□□□□ 0.27
CHMP4C-201ENST00000297265 SASH1O94885 1247 aa16.72■□□□□ 0.27
CHMP4C-201ENST00000297265 RABL6Q3YEC7 729 aaPredicted RBP16.72■□□□□ 0.27
CHMP4C-201ENST00000297265 USP26Q9BXU7 913 aa16.72■□□□□ 0.27
CHMP4C-201ENST00000297265 KAT6BQ8WYB5 2073 aa16.72■□□□□ 0.27
CHMP4C-201ENST00000297265 H7C1W4 665 aa16.71■□□□□ 0.27
CHMP4C-201ENST00000297265 RFX5P48382 616 aaPredicted RBP16.71■□□□□ 0.27
CHMP4C-201ENST00000297265 CDCA7Q9BWT1 371 aaPredicted RBP16.71■□□□□ 0.27
CHMP4C-201ENST00000297265 DAXXQ9UER7 740 aaPredicted RBP16.71■□□□□ 0.27
CHMP4C-201ENST00000297265 USP42Q9H9J4 1324 aaKnown RBP16.71■□□□□ 0.27
CHMP4C-201ENST00000297265 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.71■□□□□ 0.27
CHMP4C-201ENST00000297265 A0A087WZG4 1122 aa16.71■□□□□ 0.27
CHMP4C-201ENST00000297265 BECN1Q14457 450 aa16.71■□□□□ 0.27
CHMP4C-201ENST00000297265 UBE3BQ7Z3V4 1068 aa16.71■□□□□ 0.27
CHMP4C-201ENST00000297265 TEX13AQ9BXU3 409 aaPredicted RBP16.71■□□□□ 0.27
CHMP4C-201ENST00000297265 TJP1Q07157 1748 aa16.71■□□□□ 0.27
CHMP4C-201ENST00000297265 DOT1LQ8TEK3 1739 aa16.7■□□□□ 0.26
CHMP4C-201ENST00000297265 UBAP1LF5GYI3 381 aa16.7■□□□□ 0.26
CHMP4C-201ENST00000297265 PRIM1P49642 420 aaKnown RBP16.7■□□□□ 0.26
CHMP4C-201ENST00000297265 MARCH10Q8NA82 808 aaPredicted RBP16.7■□□□□ 0.26
CHMP4C-201ENST00000297265 KLHDC4Q8TBB5 520 aa16.7■□□□□ 0.26
CHMP4C-201ENST00000297265 BARGINQ6ZT62 677 aa16.69■□□□□ 0.26
CHMP4C-201ENST00000297265 ZBTB3Q9H5J0 574 aa16.69■□□□□ 0.26
CHMP4C-201ENST00000297265 CYP19A1P11511 503 aaPredicted RBP16.69■□□□□ 0.26
CHMP4C-201ENST00000297265 DDB1Q16531 1140 aa16.69■□□□□ 0.26
CHMP4C-201ENST00000297265 RBM42Q9BTD8 480 aaKnown RBP16.69■□□□□ 0.26
CHMP4C-201ENST00000297265 FOXO4P98177 505 aa16.68■□□□□ 0.26
CHMP4C-201ENST00000297265 PTPN12Q05209 780 aaKnown RBP16.68■□□□□ 0.26
CHMP4C-201ENST00000297265 ANTXR1Q9H6X2 564 aa16.68■□□□□ 0.26
CHMP4C-201ENST00000297265 COPRSQ9NQ92 184 aa16.68■□□□□ 0.26
CHMP4C-201ENST00000297265 BCL9LQ86UU0 1499 aa16.68■□□□□ 0.26
CHMP4C-201ENST00000297265 CHMLP26374 656 aa16.67■□□□□ 0.26
CHMP4C-201ENST00000297265 ERC1Q8IUD2 1116 aa16.67■□□□□ 0.26
CHMP4C-201ENST00000297265 EAF2Q96CJ1 260 aaPredicted RBP16.67■□□□□ 0.26
CHMP4C-201ENST00000297265 ISCA1Q9BUE6 129 aa16.67■□□□□ 0.26
CHMP4C-201ENST00000297265 OS9Q13438 667 aaPredicted RBP16.67■□□□□ 0.26
CHMP4C-201ENST00000297265 CLASRPQ8N2M8 674 aaKnown RBP16.67■□□□□ 0.26
CHMP4C-201ENST00000297265 CCDC191Q8NCU4 936 aa16.67■□□□□ 0.26
CHMP4C-201ENST00000297265 SNX21Q969T3 373 aa16.67■□□□□ 0.26
CHMP4C-201ENST00000297265 CD2BP2O95400 341 aaKnown RBP16.66■□□□□ 0.26
CHMP4C-201ENST00000297265 STARD3NLO95772 234 aa16.66■□□□□ 0.26
CHMP4C-201ENST00000297265 NBR1Q14596 966 aa16.66■□□□□ 0.26
CHMP4C-201ENST00000297265 RILPL2Q969X0 211 aa16.66■□□□□ 0.26
CHMP4C-201ENST00000297265 SYTL4Q96C24 671 aaPredicted RBP16.66■□□□□ 0.26
CHMP4C-201ENST00000297265 CWC25Q9NXE8 425 aaPredicted RBP16.66■□□□□ 0.26
CHMP4C-201ENST00000297265 TTC41PQ6P2S7 1318 aa16.66■□□□□ 0.26
CHMP4C-201ENST00000297265 TRIM6-TRIM34B2RNG4 842 aa16.65■□□□□ 0.26
CHMP4C-201ENST00000297265 ERC2O15083 957 aa16.65■□□□□ 0.26
CHMP4C-201ENST00000297265 G3BP1Q13283 466 aaKnown RBP eCLIP16.65■□□□□ 0.26
CHMP4C-201ENST00000297265 TCIRG1Q13488 830 aa16.65■□□□□ 0.26
CHMP4C-201ENST00000297265 SIL1Q9H173 461 aa16.65■□□□□ 0.26
CHMP4C-201ENST00000297265 IL25Q9H293 177 aa16.65■□□□□ 0.26
CHMP4C-201ENST00000297265 TRIM28Q13263 835 aaKnown RBP16.65■□□□□ 0.26
CHMP4C-201ENST00000297265 CASC1Q6TDU7 716 aa16.65■□□□□ 0.26
CHMP4C-201ENST00000297265 ESYT1Q9BSJ8 1104 aa16.65■□□□□ 0.26
CHMP4C-201ENST00000297265 EIF5BO60841 1220 aaKnown RBP16.64■□□□□ 0.25
CHMP4C-201ENST00000297265 MAP4K4O95819 1239 aaPredicted RBP16.64■□□□□ 0.25
CHMP4C-201ENST00000297265 LMBR1LQ6UX01 489 aa16.64■□□□□ 0.25
CHMP4C-201ENST00000297265 AK9Q5TCS8 1911 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms