RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 NPHP1O15259 732 aa15.63■□□□□ 0.09
HMGB2-201ENST00000296503 TGFB2P61812 414 aa15.63■□□□□ 0.09
HMGB2-201ENST00000296503 WWC3Q9ULE0 1092 aa15.63■□□□□ 0.09
HMGB2-201ENST00000296503 A0A0G2JLW4 131 aa15.62■□□□□ 0.09
HMGB2-201ENST00000296503 AIMP1Q12904 312 aaKnown RBP15.62■□□□□ 0.09
HMGB2-201ENST00000296503 HLFQ16534 295 aa15.62■□□□□ 0.09
HMGB2-201ENST00000296503 PROSER3Q2NL68 480 aa15.62■□□□□ 0.09
HMGB2-201ENST00000296503 C8orf58Q8NAV2 365 aa15.62■□□□□ 0.09
HMGB2-201ENST00000296503 DDX21Q9NR30 783 aaKnown RBP eCLIP15.62■□□□□ 0.09
HMGB2-201ENST00000296503 ERVV-1B6SEH8 477 aa15.61■□□□□ 0.09
HMGB2-201ENST00000296503 ZBTB3Q9H5J0 574 aa15.61■□□□□ 0.09
HMGB2-201ENST00000296503 CHPF2Q9P2E5 772 aa15.61■□□□□ 0.09
HMGB2-201ENST00000296503 NIP7Q9Y221 180 aaKnown RBP eCLIP15.61■□□□□ 0.09
HMGB2-201ENST00000296503 MAP3K15Q6ZN16 1313 aa15.61■□□□□ 0.09
HMGB2-201ENST00000296503 COPS6Q7L5N1 327 aa15.61■□□□□ 0.09
HMGB2-201ENST00000296503 DBF4Q9UBU7 674 aaPredicted RBP15.61■□□□□ 0.09
HMGB2-201ENST00000296503 DPEP1P16444 411 aa15.6■□□□□ 0.09
HMGB2-201ENST00000296503 XAGE3Q8WTP9 111 aa15.6■□□□□ 0.09
HMGB2-201ENST00000296503 CHMP4AQ9BY43 222 aa15.6■□□□□ 0.09
HMGB2-201ENST00000296503 C10orf71Q711Q0 1435 aa15.59■□□□□ 0.09
HMGB2-201ENST00000296503 CARMIL3Q8ND23 1372 aa15.59■□□□□ 0.09
HMGB2-201ENST00000296503 FAM177BA6PVY3 158 aa15.59■□□□□ 0.09
HMGB2-201ENST00000296503 RGL2O15211 777 aa15.59■□□□□ 0.09
HMGB2-201ENST00000296503 CCDC24Q8N4L8 307 aa15.59■□□□□ 0.09
HMGB2-201ENST00000296503 LRP10Q7Z4F1 713 aa15.59■□□□□ 0.09
HMGB2-201ENST00000296503 NBPF5PQ86XG9 351 aaPredicted RBP15.59■□□□□ 0.09
HMGB2-201ENST00000296503 TSPYL6Q8N831 410 aa15.59■□□□□ 0.09
HMGB2-201ENST00000296503 GOLGA2Q08379 1002 aa15.58■□□□□ 0.08
HMGB2-201ENST00000296503 CCDC30Q5VVM6 783 aa15.58■□□□□ 0.08
HMGB2-201ENST00000296503 PRR5LQ6MZQ0 368 aa15.58■□□□□ 0.08
HMGB2-201ENST00000296503 CNBD1Q8NA66 436 aa15.58■□□□□ 0.08
HMGB2-201ENST00000296503 HYPKQ9NX55 129 aa15.58■□□□□ 0.08
HMGB2-201ENST00000296503 SCN7AQ01118 1682 aa15.57■□□□□ 0.08
HMGB2-201ENST00000296503 GRIN3BO60391 1043 aa15.57■□□□□ 0.08
HMGB2-201ENST00000296503 YBX3P16989 372 aaKnown RBP eCLIP15.57■□□□□ 0.082e-29■□□□□ 10.8
HMGB2-201ENST00000296503 GTF2E1P29083 439 aaPredicted RBP15.57■□□□□ 0.08
HMGB2-201ENST00000296503 CHRNA5P30532 468 aa15.57■□□□□ 0.08
HMGB2-201ENST00000296503 TWISTNBQ3B726 338 aaPredicted RBP15.57■□□□□ 0.08
HMGB2-201ENST00000296503 TPTE2Q6XPS3 522 aa15.57■□□□□ 0.08
HMGB2-201ENST00000296503 GIGYF2Q6Y7W6 1299 aaKnown RBP15.57■□□□□ 0.08
HMGB2-201ENST00000296503 MYH16Q9H6N6 1097 aa15.57■□□□□ 0.08
HMGB2-201ENST00000296503 GPTP24298 496 aa15.57■□□□□ 0.08
HMGB2-201ENST00000296503 ST5P78524 1137 aa15.57■□□□□ 0.08
HMGB2-201ENST00000296503 SPINK5Q9NQ38 1064 aaPredicted RBP15.57■□□□□ 0.08
HMGB2-201ENST00000296503 TSHZ2Q9NRE2 1034 aa15.57■□□□□ 0.08
HMGB2-201ENST00000296503 BCS1LQ9Y276 419 aa15.57■□□□□ 0.08
HMGB2-201ENST00000296503 AFDNP55196 1824 aaKnown RBP15.56■□□□□ 0.08
HMGB2-201ENST00000296503 FANCIQ9NVI1 1328 aa15.56■□□□□ 0.08
HMGB2-201ENST00000296503 PIM2Q9P1W9 311 aa15.56■□□□□ 0.08
HMGB2-201ENST00000296503 BCORQ6W2J9 1755 aa15.56■□□□□ 0.08
HMGB2-201ENST00000296503 PXDNLA1KZ92 1463 aa15.55■□□□□ 0.08
HMGB2-201ENST00000296503 H0YIN7 160 aa15.55■□□□□ 0.08
HMGB2-201ENST00000296503 KCNA3P22001 575 aa15.55■□□□□ 0.08
HMGB2-201ENST00000296503 PDE6BP35913 854 aa15.55■□□□□ 0.08
HMGB2-201ENST00000296503 EXOSC9Q06265 439 aaKnown RBP15.55■□□□□ 0.08
HMGB2-201ENST00000296503 ANKRD13DQ6ZTN6 518 aa15.55■□□□□ 0.08
HMGB2-201ENST00000296503 BRIP1Q9BX63 1249 aa15.55■□□□□ 0.08
HMGB2-201ENST00000296503 N4BP2Q86UW6 1770 aaPredicted RBP15.55■□□□□ 0.08
HMGB2-201ENST00000296503 TCERG1O14776 1098 aaKnown RBP15.54■□□□□ 0.08
HMGB2-201ENST00000296503 C2CD5Q86YS7 1000 aa15.54■□□□□ 0.08
HMGB2-201ENST00000296503 STK31Q9BXU1 1019 aa15.54■□□□□ 0.08
HMGB2-201ENST00000296503 KIF13BQ9NQT8 1826 aa15.54■□□□□ 0.08
HMGB2-201ENST00000296503 HSP90AB3PQ58FF7 597 aa15.54■□□□□ 0.08
HMGB2-201ENST00000296503 ZNF34Q8IZ26 560 aa15.54■□□□□ 0.08
HMGB2-201ENST00000296503 NYXQ9GZU5 481 aa15.54■□□□□ 0.08
HMGB2-201ENST00000296503 PHAXQ9H814 394 aaKnown RBP15.54■□□□□ 0.08
HMGB2-201ENST00000296503 NUP98P52948 1817 aa15.53■□□□□ 0.08
HMGB2-201ENST00000296503 PLBD2Q8NHP8 589 aa15.53■□□□□ 0.08
HMGB2-201ENST00000296503 DALRD3Q5D0E6 543 aaKnown RBP15.52■□□□□ 0.08
HMGB2-201ENST00000296503 PPP1R42Q7Z4L9 355 aa15.52■□□□□ 0.08
HMGB2-201ENST00000296503 RIC3Q7Z5B4 369 aa15.52■□□□□ 0.08
HMGB2-201ENST00000296503 ZNF622Q969S3 477 aaKnown RBP eCLIP15.52■□□□□ 0.083e-29■■■■□ 24.7
HMGB2-201ENST00000296503 PDZRN3Q9UPQ7 1066 aa15.52■□□□□ 0.08
HMGB2-201ENST00000296503 ZNF521Q96K83 1311 aa15.52■□□□□ 0.08
HMGB2-201ENST00000296503 NRXN2Q9P2S2 1712 aa15.52■□□□□ 0.08
HMGB2-201ENST00000296503 TCIRG1Q13488 830 aa15.52■□□□□ 0.07
HMGB2-201ENST00000296503 PARP10Q53GL7 1025 aa15.52■□□□□ 0.07
HMGB2-201ENST00000296503 SUSD4Q5VX71 490 aa15.52■□□□□ 0.07
HMGB2-201ENST00000296503 VAMP4O75379 141 aa15.51■□□□□ 0.07
HMGB2-201ENST00000296503 SLC4A2P04920 1241 aa15.51■□□□□ 0.07
HMGB2-201ENST00000296503 YY1P25490 414 aa15.51■□□□□ 0.07
HMGB2-201ENST00000296503 NUTM1Q86Y26 1132 aa15.51■□□□□ 0.07
HMGB2-201ENST00000296503 ATP10DQ9P241 1426 aa15.51■□□□□ 0.07
HMGB2-201ENST00000296503 UBN2Q6ZU65 1347 aa15.51■□□□□ 0.07
HMGB2-201ENST00000296503 E9PSI1 815 aa15.5■□□□□ 0.07
HMGB2-201ENST00000296503 DDX58O95786 925 aaKnown RBP15.5■□□□□ 0.07
HMGB2-201ENST00000296503 ERFEQ4G0M1 354 aa15.5■□□□□ 0.07
HMGB2-201ENST00000296503 ARHGAP27Q6ZUM4 889 aa15.5■□□□□ 0.07
HMGB2-201ENST00000296503 TTLL6Q8N841 843 aa15.5■□□□□ 0.07
HMGB2-201ENST00000296503 UTP14AQ9BVJ6 771 aaKnown RBP15.5■□□□□ 0.07
HMGB2-201ENST00000296503 KIAA1551Q9HCM1 1747 aa15.49■□□□□ 0.07
HMGB2-201ENST00000296503 ATP5J2-PTCD1G3V325 749 aa15.48■□□□□ 0.07
HMGB2-201ENST00000296503 NLRP10Q86W26 655 aa15.48■□□□□ 0.07
HMGB2-201ENST00000296503 ZNF428Q96B54 188 aa15.48■□□□□ 0.07
HMGB2-201ENST00000296503 SLFN5Q08AF3 891 aa15.48■□□□□ 0.07
HMGB2-201ENST00000296503 CDCA7LQ96GN5 454 aa15.48■□□□□ 0.07
HMGB2-201ENST00000296503 TRMT112Q9UI30 125 aaKnown RBP15.48■□□□□ 0.07
HMGB2-201ENST00000296503 NTSR2O95665 410 aa15.47■□□□□ 0.07
HMGB2-201ENST00000296503 SRGNP10124 158 aa15.47■□□□□ 0.07
HMGB2-201ENST00000296503 G2E3Q7L622 706 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms