RNA–Protein interactions for RNA: ENST00000295688.7

CCT3-201, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT3, Length 2,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-201ENST00000295688 LTV1Q96GA3 475 aaPredicted RBP17.78■□□□□ 0.44
CCT3-201ENST00000295688 CNPY2Q9Y2B0 182 aa17.78■□□□□ 0.44
CCT3-201ENST00000295688 NBPF7P0C2Y1 421 aaPredicted RBP17.77■□□□□ 0.44
CCT3-201ENST00000295688 CWC27Q6UX04 472 aaKnown RBP17.77■□□□□ 0.44
CCT3-201ENST00000295688 KCNB2Q92953 911 aa17.77■□□□□ 0.44
CCT3-201ENST00000295688 PI4KAP2A4QPH2 592 aa17.77■□□□□ 0.43
CCT3-201ENST00000295688 ALDH1L1O75891 902 aa17.77■□□□□ 0.43
CCT3-201ENST00000295688 RASEFQ8IZ41 740 aa17.77■□□□□ 0.43
CCT3-201ENST00000295688 PI4KAP1Q8N8J0 262 aa17.77■□□□□ 0.43
CCT3-201ENST00000295688 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.77■□□□□ 0.43
CCT3-201ENST00000295688 HIP1O00291 1037 aa17.76■□□□□ 0.43
CCT3-201ENST00000295688 CASTP20810 708 aaKnown RBP17.76■□□□□ 0.43
CCT3-201ENST00000295688 THEMISQ8N1K5 641 aaPredicted RBP17.76■□□□□ 0.43
CCT3-201ENST00000295688 IP6K1Q92551 441 aa17.76■□□□□ 0.43
CCT3-201ENST00000295688 ECHDC1Q9NTX5 307 aa17.76■□□□□ 0.43
CCT3-201ENST00000295688 CHPF2Q9P2E5 772 aa17.76■□□□□ 0.43
CCT3-201ENST00000295688 CYP46A1Q9Y6A2 500 aa17.76■□□□□ 0.43
CCT3-201ENST00000295688 PDRG1Q9NUG6 133 aa17.76■□□□□ 0.43
CCT3-201ENST00000295688 HYPKQ9NX55 129 aa17.76■□□□□ 0.43
CCT3-201ENST00000295688 ADGRL3Q9HAR2 1447 aa17.75■□□□□ 0.43
CCT3-201ENST00000295688 EVI5LQ96CN4 794 aa17.75■□□□□ 0.43
CCT3-201ENST00000295688 ZSWIM6Q9HCJ5 1215 aa17.75■□□□□ 0.43
CCT3-201ENST00000295688 ZKSCAN1P17029 563 aaPredicted RBP17.74■□□□□ 0.43
CCT3-201ENST00000295688 TEFQ10587 303 aa17.74■□□□□ 0.43
CCT3-201ENST00000295688 DBF4Q9UBU7 674 aaPredicted RBP17.74■□□□□ 0.43
CCT3-201ENST00000295688 LTN1O94822 1766 aa17.74■□□□□ 0.43
CCT3-201ENST00000295688 TPM3P06753 285 aa17.74■□□□□ 0.43
CCT3-201ENST00000295688 NUTM2GQ5VZR2 741 aa17.74■□□□□ 0.43
CCT3-201ENST00000295688 SPG7Q9UQ90 795 aa17.74■□□□□ 0.43
CCT3-201ENST00000295688 IFIT2P09913 472 aaKnown RBP17.73■□□□□ 0.43
CCT3-201ENST00000295688 AKAP4Q5JQC9 854 aa17.73■□□□□ 0.43
CCT3-201ENST00000295688 PIBF1Q8WXW3 757 aa17.73■□□□□ 0.43
CCT3-201ENST00000295688 CHD2O14647 1828 aaKnown RBP17.73■□□□□ 0.43
CCT3-201ENST00000295688 LMO7Q8WWI1 1683 aa17.73■□□□□ 0.43
CCT3-201ENST00000295688 ADCY5O95622 1261 aa17.73■□□□□ 0.43
CCT3-201ENST00000295688 GJB2P29033 226 aa17.73■□□□□ 0.43
CCT3-201ENST00000295688 JAKMIP1Q96N16 626 aaKnown RBP17.73■□□□□ 0.43
CCT3-201ENST00000295688 FAM13BQ9NYF5 915 aa17.73■□□□□ 0.43
CCT3-201ENST00000295688 C9orf78Q9NZ63 289 aaPredicted RBP17.73■□□□□ 0.43
CCT3-201ENST00000295688 BTBD11A6QL63 1104 aa17.72■□□□□ 0.43
CCT3-201ENST00000295688 KDM4AO75164 1064 aa17.72■□□□□ 0.43
CCT3-201ENST00000295688 HMGN5P82970 282 aaKnown RBP17.72■□□□□ 0.43
CCT3-201ENST00000295688 PLEKHO1Q53GL0 409 aaPredicted RBP17.72■□□□□ 0.43
CCT3-201ENST00000295688 PRIMPOLQ96LW4 560 aa17.72■□□□□ 0.43
CCT3-201ENST00000295688 USP25Q9UHP3 1055 aa17.72■□□□□ 0.43
CCT3-201ENST00000295688 MTMR6Q9Y217 621 aa17.72■□□□□ 0.43
CCT3-201ENST00000295688 ADCY9O60503 1353 aa17.72■□□□□ 0.43
CCT3-201ENST00000295688 FIBPO43427 364 aa17.72■□□□□ 0.43
CCT3-201ENST00000295688 PSMA5P28066 241 aa17.72■□□□□ 0.43
CCT3-201ENST00000295688 RBM10P98175 930 aaKnown RBP17.72■□□□□ 0.43
CCT3-201ENST00000295688 CCDC83Q8IWF9 413 aa17.72■□□□□ 0.43
CCT3-201ENST00000295688 USHBP1Q8N6Y0 703 aa17.72■□□□□ 0.43
CCT3-201ENST00000295688 AMOTQ4VCS5 1084 aa17.71■□□□□ 0.43
CCT3-201ENST00000295688 LGR6Q9HBX8 967 aa17.71■□□□□ 0.43
CCT3-201ENST00000295688 NCAPD2Q15021 1401 aa17.71■□□□□ 0.43
CCT3-201ENST00000295688 HCLS1P14317 486 aaPredicted RBP17.7■□□□□ 0.42
CCT3-201ENST00000295688 PDCP20941 246 aa17.7■□□□□ 0.42
CCT3-201ENST00000295688 NECTIN1Q15223 517 aa17.7■□□□□ 0.42
CCT3-201ENST00000295688 DNTTIP2Q5QJE6 756 aaKnown RBP17.7■□□□□ 0.42
CCT3-201ENST00000295688 PRPF40BQ6NWY9 871 aaKnown RBP17.7■□□□□ 0.42
CCT3-201ENST00000295688 KSR2Q6VAB6 950 aa17.7■□□□□ 0.42
CCT3-201ENST00000295688 KCNH5Q8NCM2 988 aa17.7■□□□□ 0.42
CCT3-201ENST00000295688 FUCA2Q9BTY2 467 aa17.7■□□□□ 0.42
CCT3-201ENST00000295688 OVOS2A0A0G2JMS6 1433 aa17.7■□□□□ 0.42
CCT3-201ENST00000295688 CCDC171Q6TFL3 1326 aa17.7■□□□□ 0.42
CCT3-201ENST00000295688 PTH1RQ03431 593 aa17.7■□□□□ 0.42
CCT3-201ENST00000295688 NOLC1Q14978 699 aaKnown RBP eCLIP17.7■□□□□ 0.425e-6■■■□□ 19.1
CCT3-201ENST00000295688 ANKRD1Q15327 319 aa17.7■□□□□ 0.42
CCT3-201ENST00000295688 C14orf37Q86TY3 774 aa17.7■□□□□ 0.42
CCT3-201ENST00000295688 CEBPAP49715 358 aaPredicted RBP17.69■□□□□ 0.42
CCT3-201ENST00000295688 MYRIPQ8NFW9 859 aa17.69■□□□□ 0.42
CCT3-201ENST00000295688 GTF2F1P35269 517 aaKnown RBP eCLIP17.69■□□□□ 0.42
CCT3-201ENST00000295688 RNF20Q5VTR2 975 aa17.69■□□□□ 0.42
CCT3-201ENST00000295688 NBPF6Q5VWK0 638 aa17.69■□□□□ 0.42
CCT3-201ENST00000295688 ZNF530Q6P9A1 599 aaPredicted RBP17.69■□□□□ 0.42
CCT3-201ENST00000295688 SMAP1Q8IYB5 467 aaPredicted RBP17.69■□□□□ 0.42
CCT3-201ENST00000295688 NBPF4Q96M43 638 aa17.69■□□□□ 0.42
CCT3-201ENST00000295688 PRDM4Q9UKN5 801 aa17.69■□□□□ 0.42
CCT3-201ENST00000295688 PHF8Q9UPP1 1060 aa17.69■□□□□ 0.42
CCT3-201ENST00000295688 LARGE1O95461 756 aa17.68■□□□□ 0.42
CCT3-201ENST00000295688 KCNJ4P48050 445 aa17.68■□□□□ 0.42
CCT3-201ENST00000295688 ALDH8A1Q9H2A2 487 aaPredicted RBP17.68■□□□□ 0.42
CCT3-201ENST00000295688 SNRKQ9NRH2 765 aa17.68■□□□□ 0.42
CCT3-201ENST00000295688 MAP3K2Q9Y2U5 619 aa17.68■□□□□ 0.42
CCT3-201ENST00000295688 GOLGA6L6A8MZA4 724 aa17.67■□□□□ 0.42
CCT3-201ENST00000295688 CCDC192P0DO97 292 aa17.67■□□□□ 0.42
CCT3-201ENST00000295688 DNM1Q05193 864 aaKnown RBP17.67■□□□□ 0.42
CCT3-201ENST00000295688 MAP4K1Q92918 833 aa17.67■□□□□ 0.42
CCT3-201ENST00000295688 PHRF1Q9P1Y6 1649 aaKnown RBP17.67■□□□□ 0.42
CCT3-201ENST00000295688 NFAT5O94916 1531 aa17.67■□□□□ 0.42
CCT3-201ENST00000295688 DDX58O95786 925 aaKnown RBP17.67■□□□□ 0.42
CCT3-201ENST00000295688 CPA1P15085 419 aa17.67■□□□□ 0.42
CCT3-201ENST00000295688 KCNA6P17658 529 aa17.67■□□□□ 0.42
CCT3-201ENST00000295688 KRT85P78386 507 aa17.67■□□□□ 0.42
CCT3-201ENST00000295688 G3BP1Q13283 466 aaKnown RBP eCLIP17.67■□□□□ 0.422e-7■■■□□ 19.2
CCT3-201ENST00000295688 ADCK5Q3MIX3 580 aa17.67■□□□□ 0.42
CCT3-201ENST00000295688 CREB3L3Q68CJ9 461 aa17.67■□□□□ 0.42
CCT3-201ENST00000295688 AACSQ86V21 672 aa17.67■□□□□ 0.42
CCT3-201ENST00000295688 LARP6Q9BRS8 491 aaKnown RBP17.67■□□□□ 0.42
CCT3-201ENST00000295688 SPTLC3Q9NUV7 552 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms