RNA–Protein interactions for RNA: ENST00000295549.8

LINC01116-201, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 2 BASIC

Gene LINC01116, Length 1,407 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-201ENST00000295549 CLEC4GQ6UXB4 293 aa28.91■■■□□ 2.22
LINC01116-201ENST00000295549 ANKRD13DQ6ZTN6 518 aa28.91■■■□□ 2.22
LINC01116-201ENST00000295549 G2E3Q7L622 706 aa28.91■■■□□ 2.22
LINC01116-201ENST00000295549 BCL2L12Q9HB09 334 aa28.91■■■□□ 2.22
LINC01116-201ENST00000295549 C4AP0C0L4 1744 aa28.91■■■□□ 2.22
LINC01116-201ENST00000295549 CASZ1Q86V15 1759 aa28.9■■■□□ 2.22
LINC01116-201ENST00000295549 FLIIQ13045 1269 aa28.9■■■□□ 2.22
LINC01116-201ENST00000295549 NLGN1Q8N2Q7 840 aa28.9■■■□□ 2.22
LINC01116-201ENST00000295549 SMC4Q9NTJ3 1288 aa28.9■■■□□ 2.22
LINC01116-201ENST00000295549 PLBD2Q8NHP8 589 aa28.89■■■□□ 2.22
LINC01116-201ENST00000295549 MTFR1LQ9H019 292 aa28.89■■■□□ 2.22
LINC01116-201ENST00000295549 DDX58O95786 925 aaKnown RBP28.88■■■□□ 2.21
LINC01116-201ENST00000295549 BCL2L13Q9BXK5 485 aa28.88■■■□□ 2.21
LINC01116-201ENST00000295549 ZNF652Q9Y2D9 606 aa28.88■■■□□ 2.21
LINC01116-201ENST00000295549 FKBP8Q14318 412 aa28.87■■■□□ 2.21
LINC01116-201ENST00000295549 ZBTB3Q9H5J0 574 aa28.87■■■□□ 2.21
LINC01116-201ENST00000295549 CACNA1FO60840 1977 aa28.87■■■□□ 2.21
LINC01116-201ENST00000295549 ZBTB7AO95365 584 aa28.86■■■□□ 2.21
LINC01116-201ENST00000295549 HLFQ16534 295 aa28.86■■■□□ 2.21
LINC01116-201ENST00000295549 GIGYF2Q6Y7W6 1299 aaKnown RBP28.86■■■□□ 2.21
LINC01116-201ENST00000295549 FKBP5Q13451 457 aaPredicted RBP28.85■■■□□ 2.21
LINC01116-201ENST00000295549 KSR2Q6VAB6 950 aa28.85■■■□□ 2.21
LINC01116-201ENST00000295549 SCN7AQ01118 1682 aa28.83■■■□□ 2.21
LINC01116-201ENST00000295549 PI4KAP2A4QPH2 592 aa28.83■■■□□ 2.21
LINC01116-201ENST00000295549 BCAR3O75815 825 aa28.83■■■□□ 2.21
LINC01116-201ENST00000295549 MSL1Q68DK7 614 aa28.83■■■□□ 2.21
LINC01116-201ENST00000295549 RIC3Q7Z5B4 369 aa28.83■■■□□ 2.21
LINC01116-201ENST00000295549 PI4KAP1Q8N8J0 262 aa28.83■■■□□ 2.21
LINC01116-201ENST00000295549 PTPRCP08575 1304 aa28.83■■■□□ 2.21
LINC01116-201ENST00000295549 TM4SF1P30408 202 aa28.82■■■□□ 2.2
LINC01116-201ENST00000295549 RCAN3Q9UKA8 241 aa28.82■■■□□ 2.2
LINC01116-201ENST00000295549 HSP90AB3PQ58FF7 597 aa28.81■■■□□ 2.2
LINC01116-201ENST00000295549 ATF5Q9Y2D1 282 aaPredicted RBP28.81■■■□□ 2.2
LINC01116-201ENST00000295549 KIF16BQ96L93 1317 aa28.81■■■□□ 2.2
LINC01116-201ENST00000295549 ADCY9O60503 1353 aa28.81■■■□□ 2.2
LINC01116-201ENST00000295549 BCORQ6W2J9 1755 aa28.81■■■□□ 2.2
LINC01116-201ENST00000295549 TBC1D9BQ66K14 1250 aa28.8■■■□□ 2.2
LINC01116-201ENST00000295549 MAP3K2Q9Y2U5 619 aa28.8■■■□□ 2.2
LINC01116-201ENST00000295549 ATP10DQ9P241 1426 aa28.8■■■□□ 2.2
LINC01116-201ENST00000295549 TCIRG1Q13488 830 aa28.79■■■□□ 2.2
LINC01116-201ENST00000295549 NFIXQ14938 502 aa28.79■■■□□ 2.2
LINC01116-201ENST00000295549 SPON1Q9HCB6 807 aa28.79■■■□□ 2.2
LINC01116-201ENST00000295549 NOB1Q9ULX3 412 aaKnown RBP28.79■■■□□ 2.2
LINC01116-201ENST00000295549 ZNF34Q8IZ26 560 aa28.78■■■□□ 2.2
LINC01116-201ENST00000295549 ARHGAP45Q92619 1136 aa28.78■■■□□ 2.2
LINC01116-201ENST00000295549 SETDB2Q96T68 719 aa28.78■■■□□ 2.2
LINC01116-201ENST00000295549 METTL22Q9BUU2 404 aaPredicted RBP28.78■■■□□ 2.2
LINC01116-201ENST00000295549 MMP10P09238 476 aa28.77■■■□□ 2.2
LINC01116-201ENST00000295549 DNAAF4Q8WXU2 420 aa28.77■■■□□ 2.2
LINC01116-201ENST00000295549 SGIP1Q9BQI5 828 aa28.77■■■□□ 2.2
LINC01116-201ENST00000295549 NIP7Q9Y221 180 aaKnown RBP eCLIP28.77■■■□□ 2.2
LINC01116-201ENST00000295549 PTGER2P43116 358 aa28.77■■■□□ 2.2
LINC01116-201ENST00000295549 IPO8O15397 1037 aaKnown RBP28.76■■■□□ 2.19
LINC01116-201ENST00000295549 POLD1P28340 1107 aa28.76■■■□□ 2.19
LINC01116-201ENST00000295549 TRIM28Q13263 835 aaKnown RBP28.76■■■□□ 2.19
LINC01116-201ENST00000295549 BICDL1Q6ZP65 573 aa28.76■■■□□ 2.19
LINC01116-201ENST00000295549 F6X3S4 739 aa28.74■■■□□ 2.19
LINC01116-201ENST00000295549 POLRMTO00411 1230 aaKnown RBP28.74■■■□□ 2.19
LINC01116-201ENST00000295549 DDR1Q08345 913 aa28.74■■■□□ 2.19
LINC01116-201ENST00000295549 ISCA1Q9BUE6 129 aa28.74■■■□□ 2.19
LINC01116-201ENST00000295549 PARP3Q9Y6F1 533 aa28.74■■■□□ 2.19
LINC01116-201ENST00000295549 COL24A1Q17RW2 1714 aa28.73■■■□□ 2.19
LINC01116-201ENST00000295549 CARMIL3Q8ND23 1372 aa28.73■■■□□ 2.19
LINC01116-201ENST00000295549 NEXNQ0ZGT2 675 aa28.73■■■□□ 2.19
LINC01116-201ENST00000295549 PARP10Q53GL7 1025 aa28.73■■■□□ 2.19
LINC01116-201ENST00000295549 API5Q9BZZ5 524 aaKnown RBP28.73■■■□□ 2.19
LINC01116-201ENST00000295549 NUP98P52948 1817 aa28.73■■■□□ 2.19
LINC01116-201ENST00000295549 UBN2Q6ZU65 1347 aa28.72■■■□□ 2.19
LINC01116-201ENST00000295549 GPTP24298 496 aa28.72■■■□□ 2.19
LINC01116-201ENST00000295549 MYD88Q99836 296 aa28.72■■■□□ 2.19
LINC01116-201ENST00000295549 FRAT1Q92837 279 aaPredicted RBP28.71■■■□□ 2.19
LINC01116-201ENST00000295549 ATP5J2-PTCD1G3V325 749 aa28.7■■■□□ 2.19
LINC01116-201ENST00000295549 NLRP10Q86W26 655 aa28.7■■■□□ 2.19
LINC01116-201ENST00000295549 ARFGEF2Q9Y6D5 1785 aa28.7■■■□□ 2.19
LINC01116-201ENST00000295549 SERPINB2P05120 415 aa28.69■■■□□ 2.18
LINC01116-201ENST00000295549 IGKV5-2P06315 115 aa28.69■■■□□ 2.18
LINC01116-201ENST00000295549 ZKSCAN2Q63HK3 967 aa28.69■■■□□ 2.18
LINC01116-201ENST00000295549 ATF7IPQ6VMQ6 1270 aa28.69■■■□□ 2.18
LINC01116-201ENST00000295549 LINS1Q8NG48 757 aa28.69■■■□□ 2.18
LINC01116-201ENST00000295549 TRIM27P14373 513 aa28.69■■■□□ 2.18
LINC01116-201ENST00000295549 BEND3Q5T5X7 828 aa28.69■■■□□ 2.18
LINC01116-201ENST00000295549 CCDC191Q8NCU4 936 aa28.69■■■□□ 2.18
LINC01116-201ENST00000295549 SUSD4Q5VX71 490 aa28.68■■■□□ 2.18
LINC01116-201ENST00000295549 PPP1R42Q7Z4L9 355 aa28.68■■■□□ 2.18
LINC01116-201ENST00000295549 IBTKQ9P2D0 1353 aaPredicted RBP28.67■■■□□ 2.18
LINC01116-201ENST00000295549 SLC4A10Q6U841 1118 aa28.67■■■□□ 2.18
LINC01116-201ENST00000295549 TPTE2Q6XPS3 522 aa28.67■■■□□ 2.18
LINC01116-201ENST00000295549 NBPF5PQ86XG9 351 aaPredicted RBP28.67■■■□□ 2.18
LINC01116-201ENST00000295549 NYXQ9GZU5 481 aa28.67■■■□□ 2.18
LINC01116-201ENST00000295549 NEURL1BA8MQ27 555 aa28.66■■■□□ 2.18
LINC01116-201ENST00000295549 CWF19L2Q2TBE0 894 aaKnown RBP28.65■■■□□ 2.18
LINC01116-201ENST00000295549 UTP14AQ9BVJ6 771 aaKnown RBP28.65■■■□□ 2.18
LINC01116-201ENST00000295549 CWC25Q9NXE8 425 aaPredicted RBP28.65■■■□□ 2.18
LINC01116-201ENST00000295549 SRCAPQ6ZRS2 3230 aa28.65■■■□□ 2.18
LINC01116-201ENST00000295549 NTSR2O95665 410 aa28.64■■■□□ 2.18
LINC01116-201ENST00000295549 CNBD1Q8NA66 436 aa28.64■■■□□ 2.18
LINC01116-201ENST00000295549 SRCIN1Q9C0H9 1055 aa28.64■■■□□ 2.18
LINC01116-201ENST00000295549 PXDNLA1KZ92 1463 aa28.64■■■□□ 2.18
LINC01116-201ENST00000295549 ABCC4O15439 1325 aa28.64■■■□□ 2.17
LINC01116-201ENST00000295549 RNF123Q5XPI4 1314 aa28.64■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms