RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 CLASRPQ8N2M8 674 aaKnown RBP23.01■■□□□ 1.27
LSM12-201ENST00000293406 LGR6Q9HBX8 967 aa23.01■■□□□ 1.27
LSM12-201ENST00000293406 HCLS1P14317 486 aaPredicted RBP23■■□□□ 1.27
LSM12-201ENST00000293406 C14orf37Q86TY3 774 aa23■■□□□ 1.27
LSM12-201ENST00000293406 SLIT1O75093 1534 aa23■■□□□ 1.27
LSM12-201ENST00000293406 LARGE1O95461 756 aa23■■□□□ 1.27
LSM12-201ENST00000293406 CCDC83Q8IWF9 413 aa23■■□□□ 1.27
LSM12-201ENST00000293406 CRYBG1Q9Y4K1 1723 aa23■■□□□ 1.27
LSM12-201ENST00000293406 ADCY5O95622 1261 aa22.99■■□□□ 1.27
LSM12-201ENST00000293406 VPS53Q5VIR6 699 aa22.99■■□□□ 1.27
LSM12-201ENST00000293406 JAKMIP1Q96N16 626 aaKnown RBP22.99■■□□□ 1.27
LSM12-201ENST00000293406 PDRG1Q9NUG6 133 aa22.99■■□□□ 1.27
LSM12-201ENST00000293406 ARHGAP23Q9P227 1491 aa22.99■■□□□ 1.27
LSM12-201ENST00000293406 ANXA1P04083 346 aa22.99■■□□□ 1.27
LSM12-201ENST00000293406 GJB2P29033 226 aa22.99■■□□□ 1.27
LSM12-201ENST00000293406 PTH1RQ03431 593 aa22.99■■□□□ 1.27
LSM12-201ENST00000293406 ADCY9O60503 1353 aa22.98■■□□□ 1.27
LSM12-201ENST00000293406 KCNQ3O43525 872 aa22.98■■□□□ 1.27
LSM12-201ENST00000293406 MTX1Q13505 466 aa22.98■■□□□ 1.27
LSM12-201ENST00000293406 GPATCH3Q96I76 525 aa22.98■■□□□ 1.27
LSM12-201ENST00000293406 ECHDC1Q9NTX5 307 aa22.98■■□□□ 1.27
LSM12-201ENST00000293406 MED1Q15648 1581 aaPredicted RBP22.98■■□□□ 1.27
LSM12-201ENST00000293406 PRPF40BQ6NWY9 871 aaKnown RBP22.98■■□□□ 1.27
LSM12-201ENST00000293406 MPNDQ8N594 471 aa22.98■■□□□ 1.27
LSM12-201ENST00000293406 ZSCAN31Q96LW9 406 aaPredicted RBP22.98■■□□□ 1.27
LSM12-201ENST00000293406 ZMYND15Q9H091 742 aa22.98■■□□□ 1.27
LSM12-201ENST00000293406 CYP46A1Q9Y6A2 500 aa22.98■■□□□ 1.27
LSM12-201ENST00000293406 USP54Q70EL1 1684 aa22.98■■□□□ 1.27
LSM12-201ENST00000293406 TM6SF1Q9BZW5 370 aa22.97■■□□□ 1.27
LSM12-201ENST00000293406 SH2B1Q9NRF2 756 aaPredicted RBP22.97■■□□□ 1.27
LSM12-201ENST00000293406 TEFQ10587 303 aa22.97■■□□□ 1.27
LSM12-201ENST00000293406 ADCK5Q3MIX3 580 aa22.97■■□□□ 1.27
LSM12-201ENST00000293406 DNTTIP2Q5QJE6 756 aaKnown RBP22.97■■□□□ 1.27
LSM12-201ENST00000293406 ZSWIM6Q9HCJ5 1215 aa22.97■■□□□ 1.27
LSM12-201ENST00000293406 MTMR6Q9Y217 621 aa22.97■■□□□ 1.27
LSM12-201ENST00000293406 NBPF6Q5VWK0 638 aa22.96■■□□□ 1.27
LSM12-201ENST00000293406 IP6K1Q92551 441 aa22.96■■□□□ 1.27
LSM12-201ENST00000293406 NBPF4Q96M43 638 aa22.96■■□□□ 1.27
LSM12-201ENST00000293406 ZNF830Q96NB3 372 aaPredicted RBP22.96■■□□□ 1.27
LSM12-201ENST00000293406 BTBD11A6QL63 1104 aa22.96■■□□□ 1.27
LSM12-201ENST00000293406 IFIT2P09913 472 aaKnown RBP22.96■■□□□ 1.27
LSM12-201ENST00000293406 DNM1Q05193 864 aaKnown RBP22.96■■□□□ 1.27
LSM12-201ENST00000293406 PIBF1Q8WXW3 757 aa22.96■■□□□ 1.27
LSM12-201ENST00000293406 C9orf78Q9NZ63 289 aaPredicted RBP22.96■■□□□ 1.27
LSM12-201ENST00000293406 KLHL34Q8N239 644 aa22.95■■□□□ 1.26
LSM12-201ENST00000293406 KDM4AO75164 1064 aa22.94■■□□□ 1.26
LSM12-201ENST00000293406 GIMAP6Q6P9H5 292 aa22.94■■□□□ 1.26
LSM12-201ENST00000293406 ERC1Q8IUD2 1116 aa22.94■■□□□ 1.26
LSM12-201ENST00000293406 KCNB2Q92953 911 aa22.94■■□□□ 1.26
LSM12-201ENST00000293406 DBF4Q9UBU7 674 aaPredicted RBP22.94■■□□□ 1.26
LSM12-201ENST00000293406 KDM3BQ7LBC6 1761 aa22.94■■□□□ 1.26
LSM12-201ENST00000293406 KCNA6P17658 529 aa22.94■■□□□ 1.26
LSM12-201ENST00000293406 EVI5LQ96CN4 794 aa22.94■■□□□ 1.26
LSM12-201ENST00000293406 ZKSCAN1P17029 563 aaPredicted RBP22.93■■□□□ 1.26
LSM12-201ENST00000293406 PLPPR3Q6T4P5 718 aa22.93■■□□□ 1.26
LSM12-201ENST00000293406 FUCA2Q9BTY2 467 aa22.93■■□□□ 1.26
LSM12-201ENST00000293406 TTC12Q9H892 705 aaPredicted RBP22.93■■□□□ 1.26
LSM12-201ENST00000293406 KIF13AQ9H1H9 1805 aa22.93■■□□□ 1.26
LSM12-201ENST00000293406 VPS37CA5D8V6 355 aaPredicted RBP22.93■■□□□ 1.26
LSM12-201ENST00000293406 NECTIN1Q15223 517 aa22.93■■□□□ 1.26
LSM12-201ENST00000293406 MTERF4Q7Z6M4 381 aaKnown RBP22.93■■□□□ 1.26
LSM12-201ENST00000293406 PA2G4Q9UQ80 394 aaKnown RBP22.93■■□□□ 1.26
LSM12-201ENST00000293406 MAP3K2Q9Y2U5 619 aa22.93■■□□□ 1.26
LSM12-201ENST00000293406 CCDC171Q6TFL3 1326 aa22.92■■□□□ 1.26
LSM12-201ENST00000293406 DTNBO60941 627 aa22.92■■□□□ 1.26
LSM12-201ENST00000293406 ALDH1L1O75891 902 aa22.92■■□□□ 1.26
LSM12-201ENST00000293406 NOLC1Q14978 699 aaKnown RBP eCLIP22.92■■□□□ 1.26
LSM12-201ENST00000293406 ME3Q16798 604 aa22.92■■□□□ 1.26
LSM12-201ENST00000293406 AKAP4Q5JQC9 854 aa22.92■■□□□ 1.26
LSM12-201ENST00000293406 ZNF530Q6P9A1 599 aaPredicted RBP22.92■■□□□ 1.26
LSM12-201ENST00000293406 THEMISQ8N1K5 641 aaPredicted RBP22.92■■□□□ 1.26
LSM12-201ENST00000293406 HDAC5Q9UQL6 1122 aa22.92■■□□□ 1.26
LSM12-201ENST00000293406 LTN1O94822 1766 aa22.91■■□□□ 1.26
LSM12-201ENST00000293406 ZBTB7CA1YPR0 619 aa22.91■■□□□ 1.26
LSM12-201ENST00000293406 AACSQ86V21 672 aa22.91■■□□□ 1.26
LSM12-201ENST00000293406 KCNJ4P48050 445 aa22.91■■□□□ 1.26
LSM12-201ENST00000293406 ST3GAL1Q11201 340 aa22.91■■□□□ 1.26
LSM12-201ENST00000293406 MPRIPQ6WCQ1 1025 aa22.91■■□□□ 1.26
LSM12-201ENST00000293406 RBM8AQ9Y5S9 174 aaKnown RBP22.91■■□□□ 1.26
LSM12-201ENST00000293406 PLCB2Q00722 1185 aa22.9■■□□□ 1.26
LSM12-201ENST00000293406 DDX54Q8TDD1 881 aaKnown RBP22.9■■□□□ 1.26
LSM12-201ENST00000293406 CREB3L3Q68CJ9 461 aa22.9■■□□□ 1.26
LSM12-201ENST00000293406 NECAB1Q8N987 351 aa22.9■■□□□ 1.26
LSM12-201ENST00000293406 MYRIPQ8NFW9 859 aa22.9■■□□□ 1.26
LSM12-201ENST00000293406 KSR2Q6VAB6 950 aa22.89■■□□□ 1.25
LSM12-201ENST00000293406 PHF8Q9UPP1 1060 aa22.89■■□□□ 1.25
LSM12-201ENST00000293406 HIP1O00291 1037 aa22.88■■□□□ 1.25
LSM12-201ENST00000293406 PLEKHO1Q53GL0 409 aaPredicted RBP22.88■■□□□ 1.25
LSM12-201ENST00000293406 PRIMPOLQ96LW4 560 aa22.88■■□□□ 1.25
LSM12-201ENST00000293406 CWF19L2Q2TBE0 894 aaKnown RBP22.88■■□□□ 1.25
LSM12-201ENST00000293406 TPCN1Q9ULQ1 816 aa22.88■■□□□ 1.25
LSM12-201ENST00000293406 LARP1BQ659C4 914 aaKnown RBP22.87■■□□□ 1.25
LSM12-201ENST00000293406 MAP4K1Q92918 833 aa22.87■■□□□ 1.25
LSM12-201ENST00000293406 FAM227BQ96M60 508 aa22.87■■□□□ 1.25
LSM12-201ENST00000293406 PROSER3Q2NL68 480 aa22.87■■□□□ 1.25
LSM12-201ENST00000293406 CCDC192P0DO97 292 aa22.86■■□□□ 1.25
LSM12-201ENST00000293406 PDIA4P13667 645 aaKnown RBP22.86■■□□□ 1.25
LSM12-201ENST00000293406 PSMA5P28066 241 aa22.86■■□□□ 1.25
LSM12-201ENST00000293406 HMGN5P82970 282 aaKnown RBP22.86■■□□□ 1.25
LSM12-201ENST00000293406 NMIQ13287 307 aaPredicted RBP22.86■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms