RNA–Protein interactions for RNA: ENST00000291525.11

TFF3-201, Transcript of trefoil factor 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TFF3, Length 407 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-201ENST00000291525 CNKSR1Q969H4 720 aa22.92■■□□□ 1.26
TFF3-201ENST00000291525 TIAM2Q8IVF5 1701 aa22.91■■□□□ 1.26
TFF3-201ENST00000291525 APLP1P51693 650 aa22.91■■□□□ 1.26
TFF3-201ENST00000291525 CCDC24Q8N4L8 307 aa22.91■■□□□ 1.26
TFF3-201ENST00000291525 MIS18AQ9NYP9 233 aa22.91■■□□□ 1.26
TFF3-201ENST00000291525 STYK1Q6J9G0 422 aa22.9■■□□□ 1.26
TFF3-201ENST00000291525 ARFGEF2Q9Y6D5 1785 aa22.9■■□□□ 1.26
TFF3-201ENST00000291525 CACNA1SQ13698 1873 aa22.9■■□□□ 1.26
TFF3-201ENST00000291525 NBPF26B4DH59 902 aa22.89■■□□□ 1.25
TFF3-201ENST00000291525 SOGA3Q5TF21 947 aa22.89■■□□□ 1.25
TFF3-201ENST00000291525 NBPF10Q6P3W6 841 aaKnown RBP22.89■■□□□ 1.25
TFF3-201ENST00000291525 NBPF15Q8N660 670 aa22.89■■□□□ 1.25
TFF3-201ENST00000291525 MASTLQ96GX5 879 aa22.89■■□□□ 1.25
TFF3-201ENST00000291525 NIP7Q9Y221 180 aaKnown RBP eCLIP22.89■■□□□ 1.25
TFF3-201ENST00000291525 FER1L6Q2WGJ9 1857 aa22.88■■□□□ 1.25
TFF3-201ENST00000291525 TPTE2Q6XPS3 522 aa22.88■■□□□ 1.25
TFF3-201ENST00000291525 DICER1Q9UPY3 1922 aaKnown RBP22.87■■□□□ 1.25
TFF3-201ENST00000291525 NFKBIEO00221 500 aa22.87■■□□□ 1.25
TFF3-201ENST00000291525 C21orf2O43822 256 aa22.87■■□□□ 1.25
TFF3-201ENST00000291525 SRGNP10124 158 aa22.87■■□□□ 1.25
TFF3-201ENST00000291525 FSTL1Q12841 308 aa22.87■■□□□ 1.25
TFF3-201ENST00000291525 RRAGCQ9HB90 399 aa22.87■■□□□ 1.25
TFF3-201ENST00000291525 EIF4A1P60842 406 aaKnown RBP22.86■■□□□ 1.25
TFF3-201ENST00000291525 ZNF219Q9P2Y4 722 aaPredicted RBP22.86■■□□□ 1.25
TFF3-201ENST00000291525 CEP350Q5VT06 3117 aa22.86■■□□□ 1.25
TFF3-201ENST00000291525 GLTPD2A6NH11 291 aa22.85■■□□□ 1.25
TFF3-201ENST00000291525 LMOD3Q0VAK6 560 aa22.85■■□□□ 1.25
TFF3-201ENST00000291525 PRPF40BQ6NWY9 871 aaKnown RBP22.85■■□□□ 1.25
TFF3-201ENST00000291525 SLX4Q8IY92 1834 aa22.85■■□□□ 1.25
TFF3-201ENST00000291525 LTBP3Q9NS15 1303 aa22.84■■□□□ 1.25
TFF3-201ENST00000291525 KIF6Q6ZMV9 814 aa22.84■■□□□ 1.25
TFF3-201ENST00000291525 THUMPD2Q9BTF0 503 aaKnown RBP22.84■■□□□ 1.25
TFF3-201ENST00000291525 TAOK3Q9H2K8 898 aa22.84■■□□□ 1.25
TFF3-201ENST00000291525 MYBBP1AQ9BQG0 1328 aaKnown RBP22.83■■□□□ 1.25
TFF3-201ENST00000291525 ERVV-1B6SEH8 477 aa22.83■■□□□ 1.25
TFF3-201ENST00000291525 NPR1P16066 1061 aa22.83■■□□□ 1.25
TFF3-201ENST00000291525 GTF2E1P29083 439 aaPredicted RBP22.83■■□□□ 1.25
TFF3-201ENST00000291525 PRELPP51888 382 aa22.83■■□□□ 1.25
TFF3-201ENST00000291525 DPY19L2Q6NUT2 758 aa22.83■■□□□ 1.25
TFF3-201ENST00000291525 ERBB4Q15303 1308 aa22.82■■□□□ 1.24
TFF3-201ENST00000291525 NUP98P52948 1817 aa22.82■■□□□ 1.24
TFF3-201ENST00000291525 VEGFAP15692 232 aaPredicted RBP22.82■■□□□ 1.24
TFF3-201ENST00000291525 RIPK4P57078 832 aa22.82■■□□□ 1.24
TFF3-201ENST00000291525 DDX10Q13206 875 aaKnown RBP22.82■■□□□ 1.24
TFF3-201ENST00000291525 ERFEQ4G0M1 354 aa22.82■■□□□ 1.24
TFF3-201ENST00000291525 NYXQ9GZU5 481 aa22.82■■□□□ 1.24
TFF3-201ENST00000291525 TSPYL4Q9UJ04 414 aa22.82■■□□□ 1.24
TFF3-201ENST00000291525 RRP7AQ9Y3A4 280 aaKnown RBP22.82■■□□□ 1.24
TFF3-201ENST00000291525 HLFQ16534 295 aa22.81■■□□□ 1.24
TFF3-201ENST00000291525 NGEFQ8N5V2 710 aa22.81■■□□□ 1.24
TFF3-201ENST00000291525 SMC1BQ8NDV3 1235 aa22.81■■□□□ 1.24
TFF3-201ENST00000291525 WDR90Q96KV7 1748 aa22.81■■□□□ 1.24
TFF3-201ENST00000291525 MAP3K15Q6ZN16 1313 aa22.81■■□□□ 1.24
TFF3-201ENST00000291525 FAM177BA6PVY3 158 aa22.8■■□□□ 1.24
TFF3-201ENST00000291525 BABAM1Q9NWV8 329 aa22.8■■□□□ 1.24
TFF3-201ENST00000291525 KLRG2A4D1S0 409 aaPredicted RBP22.79■■□□□ 1.24
TFF3-201ENST00000291525 CCDC93Q567U6 631 aa22.79■■□□□ 1.24
TFF3-201ENST00000291525 MYL6BP14649 208 aa22.78■■□□□ 1.24
TFF3-201ENST00000291525 TMPOP42166 694 aaKnown RBP22.77■■□□□ 1.24
TFF3-201ENST00000291525 WDR43Q15061 677 aaKnown RBP eCLIP22.77■■□□□ 1.24
TFF3-201ENST00000291525 IBTKQ9P2D0 1353 aaPredicted RBP22.76■■□□□ 1.23
TFF3-201ENST00000291525 ALDH1B1P30837 517 aa22.76■■□□□ 1.23
TFF3-201ENST00000291525 TTLL7Q6ZT98 887 aa22.75■■□□□ 1.23
TFF3-201ENST00000291525 RTKN2Q8IZC4 609 aa22.74■■□□□ 1.23
TFF3-201ENST00000291525 C7orf43Q8WVR3 580 aa22.74■■□□□ 1.23
TFF3-201ENST00000291525 ZBTB3Q9H5J0 574 aa22.74■■□□□ 1.23
TFF3-201ENST00000291525 RIC1Q4ADV7 1423 aa22.74■■□□□ 1.23
TFF3-201ENST00000291525 EIF2S2P20042 333 aaKnown RBP22.72■■□□□ 1.23
TFF3-201ENST00000291525 GPTP24298 496 aa22.72■■□□□ 1.23
TFF3-201ENST00000291525 FKBP4Q02790 459 aaKnown RBP eCLIP22.72■■□□□ 1.23
TFF3-201ENST00000291525 GIGYF2Q6Y7W6 1299 aaKnown RBP22.72■■□□□ 1.23
TFF3-201ENST00000291525 RUNDC1Q96C34 613 aa22.72■■□□□ 1.23
TFF3-201ENST00000291525 PPP1R42Q7Z4L9 355 aa22.71■■□□□ 1.23
TFF3-201ENST00000291525 NUTM1Q86Y26 1132 aa22.71■■□□□ 1.23
TFF3-201ENST00000291525 CCDC146Q8IYE0 955 aa22.71■■□□□ 1.23
TFF3-201ENST00000291525 DNAJC5GQ8N7S2 189 aa22.71■■□□□ 1.23
TFF3-201ENST00000291525 RPGRQ92834 1020 aaKnown RBP22.71■■□□□ 1.23
TFF3-201ENST00000291525 ABCC12Q96J65 1359 aa22.71■■□□□ 1.23
TFF3-201ENST00000291525 NEUROD2Q15784 382 aa22.7■■□□□ 1.22
TFF3-201ENST00000291525 CRY2Q49AN0 593 aa22.7■■□□□ 1.22
TFF3-201ENST00000291525 PARP10Q53GL7 1025 aa22.7■■□□□ 1.22
TFF3-201ENST00000291525 UBN2Q6ZU65 1347 aa22.69■■□□□ 1.22
TFF3-201ENST00000291525 ZNF34Q8IZ26 560 aa22.69■■□□□ 1.22
TFF3-201ENST00000291525 SUSD4Q5VX71 490 aa22.68■■□□□ 1.22
TFF3-201ENST00000291525 CC2D2BQ6DHV5 1058 aa22.68■■□□□ 1.22
TFF3-201ENST00000291525 IQCA1LA6NCM1 817 aa22.67■■□□□ 1.22
TFF3-201ENST00000291525 POTECB2RU33 542 aa22.67■■□□□ 1.22
TFF3-201ENST00000291525 KLRG1Q96E93 195 aa22.67■■□□□ 1.22
TFF3-201ENST00000291525 SCN4AP35499 1836 aa22.66■■□□□ 1.22
TFF3-201ENST00000291525 ANKRD36CQ5JPF3 1778 aa22.66■■□□□ 1.22
TFF3-201ENST00000291525 DDNO94850 711 aaPredicted RBP22.66■■□□□ 1.22
TFF3-201ENST00000291525 NTSR2O95665 410 aa22.66■■□□□ 1.22
TFF3-201ENST00000291525 PDIA6Q15084 440 aa22.66■■□□□ 1.22
TFF3-201ENST00000291525 GRIPAP1Q4V328 841 aa22.66■■□□□ 1.22
TFF3-201ENST00000291525 HSP90AB3PQ58FF7 597 aa22.66■■□□□ 1.22
TFF3-201ENST00000291525 RBM17Q96I25 401 aaKnown RBP22.66■■□□□ 1.22
TFF3-201ENST00000291525 ZNF277Q9NRM2 450 aaPredicted RBP22.66■■□□□ 1.22
TFF3-201ENST00000291525 LAS1LQ9Y4W2 734 aaKnown RBP22.66■■□□□ 1.22
TFF3-201ENST00000291525 CHL1O00533 1208 aa22.65■■□□□ 1.22
TFF3-201ENST00000291525 HOXA10P31260 410 aaPredicted RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms