RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 CCDC24Q8N4L8 307 aa5.65□□□□□ -1.5
UBR1-201ENST00000290650 ADCY10Q96PN6 1610 aa5.65□□□□□ -1.5
UBR1-201ENST00000290650 UQCRHLA0A096LP55 91 aa5.65□□□□□ -1.5
UBR1-201ENST00000290650 UQCRHP07919 91 aa5.65□□□□□ -1.5
UBR1-201ENST00000290650 FAM173BQ6P4H8 233 aa5.65□□□□□ -1.5
UBR1-201ENST00000290650 HYPKQ9NX55 129 aa5.65□□□□□ -1.5
UBR1-201ENST00000290650 USP19O94966 1318 aa5.65□□□□□ -1.5
UBR1-201ENST00000290650 METP08581 1390 aa5.65□□□□□ -1.5
UBR1-201ENST00000290650 PIK3R4Q99570 1358 aa5.65□□□□□ -1.5
UBR1-201ENST00000290650 SPHKAPQ2M3C7 1700 aa5.65□□□□□ -1.51
UBR1-201ENST00000290650 GCP02774 474 aa5.65□□□□□ -1.51
UBR1-201ENST00000290650 HCLS1P14317 486 aaPredicted RBP5.65□□□□□ -1.51
UBR1-201ENST00000290650 ECHDC1Q9NTX5 307 aa5.65□□□□□ -1.51
UBR1-201ENST00000290650 LMBR1LQ6UX01 489 aa5.65□□□□□ -1.51
UBR1-201ENST00000290650 NUP62CLQ9H1M0 184 aa5.65□□□□□ -1.51
UBR1-201ENST00000290650 CCDC192P0DO97 292 aa5.65□□□□□ -1.51
UBR1-201ENST00000290650 NMIQ13287 307 aaPredicted RBP5.65□□□□□ -1.51
UBR1-201ENST00000290650 AMOTQ4VCS5 1084 aa5.65□□□□□ -1.51
UBR1-201ENST00000290650 NBPF6Q5VWK0 638 aa5.65□□□□□ -1.51
UBR1-201ENST00000290650 AIDAQ96BJ3 306 aa5.65□□□□□ -1.51
UBR1-201ENST00000290650 NBPF4Q96M43 638 aa5.65□□□□□ -1.51
UBR1-201ENST00000290650 PRDM10Q9NQV6 1147 aa5.65□□□□□ -1.51
UBR1-201ENST00000290650 GRM8O00222 908 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 DNM1Q05193 864 aaKnown RBP5.64□□□□□ -1.51
UBR1-201ENST00000290650 IFIT5Q13325 482 aaKnown RBP5.64□□□□□ -1.51
UBR1-201ENST00000290650 DHX8Q14562 1220 aaKnown RBP5.64□□□□□ -1.51
UBR1-201ENST00000290650 SMC5Q8IY18 1101 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 LIMCH1Q9UPQ0 1083 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 PRIM1P49642 420 aaKnown RBP5.64□□□□□ -1.51
UBR1-201ENST00000290650 USP48Q86UV5 1035 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 AMOTL1Q8IY63 956 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 DCTPP1Q9H773 170 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 RBM8AQ9Y5S9 174 aaKnown RBP5.64□□□□□ -1.51
UBR1-201ENST00000290650 SBNO2Q9Y2G9 1366 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 STX6O43752 255 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 CD2BP2O95400 341 aaKnown RBP5.64□□□□□ -1.51
UBR1-201ENST00000290650 PDCP20941 246 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 TFCP2Q12800 502 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 MICU3Q86XE3 530 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 PLEKHF1Q96S99 279 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 TRMT1Q9NXH9 659 aaKnown RBP5.64□□□□□ -1.51
UBR1-201ENST00000290650 SERPINC1P01008 464 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 TPM3P06753 285 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 GSPT1P15170 499 aaKnown RBP5.64□□□□□ -1.51
UBR1-201ENST00000290650 TIMM10P62072 90 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 KLHL10Q6JEL2 608 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 PKNOX2Q96KN3 472 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 FAM227BQ96M60 508 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.64□□□□□ -1.512e-6■■■■□ 20.6
UBR1-201ENST00000290650 STARD3NLO95772 234 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 ATP8B2P98198 1209 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 LDHAL6AQ6ZMR3 332 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 ZNF771Q7L3S4 317 aaPredicted RBP5.64□□□□□ -1.51
UBR1-201ENST00000290650 RBM5P52756 815 aaKnown RBP eCLIP5.64□□□□□ -1.51
UBR1-201ENST00000290650 AK2P54819 239 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 NAP1L1P55209 391 aaKnown RBP5.64□□□□□ -1.51
UBR1-201ENST00000290650 OLFM4Q6UX06 510 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 IFNL2Q8IZJ0 200 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 CCDC34Q96HJ3 373 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 USP26Q9BXU7 913 aa5.64□□□□□ -1.51
UBR1-201ENST00000290650 PRDM15P57071 1507 aaPredicted RBP5.63□□□□□ -1.51
UBR1-201ENST00000290650 E9PCH4 1651 aa5.63□□□□□ -1.51
UBR1-201ENST00000290650 GOLGA8BA8MQT2 603 aa5.63□□□□□ -1.51
UBR1-201ENST00000290650 BRF1Q92994 677 aa5.63□□□□□ -1.51
UBR1-201ENST00000290650 CIZ1Q9ULV3 898 aaPredicted RBP5.63□□□□□ -1.51
UBR1-201ENST00000290650 FLT4P35916 1363 aa5.63□□□□□ -1.51
UBR1-201ENST00000290650 MAP3K5Q99683 1374 aa5.63□□□□□ -1.51
UBR1-201ENST00000290650 RANBP6O60518 1105 aaKnown RBP5.63□□□□□ -1.51
UBR1-201ENST00000290650 IMMTQ16891 758 aaKnown RBP5.63□□□□□ -1.51
UBR1-201ENST00000290650 ZNF521Q96K83 1311 aa5.63□□□□□ -1.51
UBR1-201ENST00000290650 TRMT1LQ7Z2T5 733 aaKnown RBP5.63□□□□□ -1.51
UBR1-201ENST00000290650 ZHX3Q9H4I2 956 aa5.63□□□□□ -1.51
UBR1-201ENST00000290650 CWC25Q9NXE8 425 aaPredicted RBP5.63□□□□□ -1.51
UBR1-201ENST00000290650 PPP6R1Q9UPN7 881 aa5.63□□□□□ -1.51
UBR1-201ENST00000290650 A1BGP04217 495 aa5.63□□□□□ -1.51
UBR1-201ENST00000290650 SART3Q15020 963 aaKnown RBP5.63□□□□□ -1.51
UBR1-201ENST00000290650 ANKRD1Q15327 319 aa5.63□□□□□ -1.51
UBR1-201ENST00000290650 TSR1Q2NL82 804 aaKnown RBP5.63□□□□□ -1.51
UBR1-201ENST00000290650 EVI5LQ96CN4 794 aa5.63□□□□□ -1.51
UBR1-201ENST00000290650 QRICH2Q9H0J4 1663 aa5.63□□□□□ -1.51
UBR1-201ENST00000290650 Q6ZUG5 572 aa5.63□□□□□ -1.51
UBR1-201ENST00000290650 FAM89AQ96GI7 184 aa5.63□□□□□ -1.51
UBR1-201ENST00000290650 TRPM2O94759 1503 aa5.63□□□□□ -1.51
UBR1-201ENST00000290650 CHMLP26374 656 aa5.62□□□□□ -1.51
UBR1-201ENST00000290650 USP5P45974 858 aa5.62□□□□□ -1.51
UBR1-201ENST00000290650 MAP3K11Q16584 847 aa5.62□□□□□ -1.51
UBR1-201ENST00000290650 ZNF396Q96N95 335 aaPredicted RBP5.62□□□□□ -1.51
UBR1-201ENST00000290650 SYNMO15061 1565 aa5.62□□□□□ -1.51
UBR1-201ENST00000290650 SNRPA1P09661 255 aaKnown RBP5.62□□□□□ -1.51
UBR1-201ENST00000290650 ARHGAP45Q92619 1136 aa5.62□□□□□ -1.51
UBR1-201ENST00000290650 ANKIB1Q9P2G1 1089 aa5.62□□□□□ -1.51
UBR1-201ENST00000290650 RNMTO43148 476 aaKnown RBP5.62□□□□□ -1.51
UBR1-201ENST00000290650 ADCY5O95622 1261 aa5.62□□□□□ -1.51
UBR1-201ENST00000290650 IL17REQ8NFR9 667 aa5.62□□□□□ -1.51
UBR1-201ENST00000290650 ZKSCAN3Q9BRR0 538 aa5.62□□□□□ -1.51
UBR1-201ENST00000290650 ZNF213O14771 459 aa5.62□□□□□ -1.51
UBR1-201ENST00000290650 APOBRQ0VD83 1088 aa5.62□□□□□ -1.51
UBR1-201ENST00000290650 PROSER3Q2NL68 480 aa5.62□□□□□ -1.51
UBR1-201ENST00000290650 AKAP4Q5JQC9 854 aa5.62□□□□□ -1.51
UBR1-201ENST00000290650 ZCRB1Q8TBF4 217 aaKnown RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms