RNA–Protein interactions for RNA: ENST00000290037.10

SEC16A-202, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SEC16A, Length 8,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-202ENST00000290037 LDHCP07864 332 aa17.12■□□□□ 0.33
SEC16A-202ENST00000290037 UHRF1BP1LA0JNW5 1464 aa17.12■□□□□ 0.33
SEC16A-202ENST00000290037 SLC5A1P13866 664 aa17.12■□□□□ 0.33
SEC16A-202ENST00000290037 ALDH1L1O75891 902 aa17.12■□□□□ 0.33
SEC16A-202ENST00000290037 YEATS4O95619 227 aa17.12■□□□□ 0.33
SEC16A-202ENST00000290037 TICAM2Q86XR7 235 aa17.12■□□□□ 0.33
SEC16A-202ENST00000290037 VSIG10Q8N0Z9 540 aa17.12■□□□□ 0.33
SEC16A-202ENST00000290037 TDO2P48775 406 aa17.12■□□□□ 0.33
SEC16A-202ENST00000290037 NBPF8Q3BBV2 869 aa17.12■□□□□ 0.33
SEC16A-202ENST00000290037 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.12■□□□□ 0.337e-7■■■■■ 77.4
SEC16A-202ENST00000290037 HOXB7P09629 217 aa17.12■□□□□ 0.33
SEC16A-202ENST00000290037 GNAT2P19087 354 aa17.12■□□□□ 0.33
SEC16A-202ENST00000290037 ESCO1Q5FWF5 840 aa17.11■□□□□ 0.33
SEC16A-202ENST00000290037 GIGYF2Q6Y7W6 1299 aaKnown RBP17.11■□□□□ 0.33
SEC16A-202ENST00000290037 CYB5RLQ6IPT4 315 aa17.11■□□□□ 0.33
SEC16A-202ENST00000290037 WDHD1O75717 1129 aaPredicted RBP17.11■□□□□ 0.33
SEC16A-202ENST00000290037 UQCRFS1P1P0C7P4 283 aa17.11■□□□□ 0.33
SEC16A-202ENST00000290037 NAP1L4Q99733 375 aaKnown RBP17.11■□□□□ 0.33
SEC16A-202ENST00000290037 WASLO00401 505 aaPredicted RBP17.11■□□□□ 0.33
SEC16A-202ENST00000290037 DCAF8L1A6NGE4 600 aa17.1■□□□□ 0.33
SEC16A-202ENST00000290037 IVLP07476 585 aa17.1■□□□□ 0.33
SEC16A-202ENST00000290037 RBM26Q5T8P6 1007 aaKnown RBP17.1■□□□□ 0.33
SEC16A-202ENST00000290037 JAKMIP1Q96N16 626 aaKnown RBP17.1■□□□□ 0.33
SEC16A-202ENST00000290037 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.1■□□□□ 0.331e-9■■■■□ 19.8
SEC16A-202ENST00000290037 KIAA1328Q86T90 577 aa17.1■□□□□ 0.33
SEC16A-202ENST00000290037 PAFAH1B1P43034 410 aa17.1■□□□□ 0.33
SEC16A-202ENST00000290037 SLC12A5Q9H2X9 1139 aa17.1■□□□□ 0.33
SEC16A-202ENST00000290037 TBC1D32Q96NH3 1257 aa17.09■□□□□ 0.33
SEC16A-202ENST00000290037 C8orf76Q96K31 380 aa17.09■□□□□ 0.33
SEC16A-202ENST00000290037 KRT23Q9C075 422 aa17.09■□□□□ 0.33
SEC16A-202ENST00000290037 NT5C2P49902 561 aa17.09■□□□□ 0.33
SEC16A-202ENST00000290037 NUP153P49790 1475 aaKnown RBP17.09■□□□□ 0.33
SEC16A-202ENST00000290037 GLT8D2Q9H1C3 349 aa17.09■□□□□ 0.33
SEC16A-202ENST00000290037 DUSP27Q5VZP5 1158 aa17.08■□□□□ 0.33
SEC16A-202ENST00000290037 CATIPQ7Z7H3 387 aa17.08■□□□□ 0.33
SEC16A-202ENST00000290037 ECHDC1Q9NTX5 307 aa17.08■□□□□ 0.33
SEC16A-202ENST00000290037 RBM25P49756 843 aaKnown RBP17.08■□□□□ 0.33
SEC16A-202ENST00000290037 KIF4AO95239 1232 aa17.08■□□□□ 0.33
SEC16A-202ENST00000290037 TERF1P54274 439 aa17.08■□□□□ 0.32
SEC16A-202ENST00000290037 PPP2R5BQ15173 497 aa17.08■□□□□ 0.32
SEC16A-202ENST00000290037 LRRC45Q96CN5 670 aa17.08■□□□□ 0.32
SEC16A-202ENST00000290037 SBNO2Q9Y2G9 1366 aa17.08■□□□□ 0.32
SEC16A-202ENST00000290037 CALM1P0DP23 149 aa17.08■□□□□ 0.32
SEC16A-202ENST00000290037 CALM2P0DP24 149 aa17.08■□□□□ 0.32
SEC16A-202ENST00000290037 CALM3P0DP25 149 aa17.08■□□□□ 0.32
SEC16A-202ENST00000290037 CDC5LQ99459 802 aaKnown RBP17.07■□□□□ 0.32
SEC16A-202ENST00000290037 ABCC1P33527 1531 aa17.07■□□□□ 0.32
SEC16A-202ENST00000290037 BAG4O95429 457 aaKnown RBP17.07■□□□□ 0.32
SEC16A-202ENST00000290037 EIF5P55010 431 aaKnown RBP17.07■□□□□ 0.32
SEC16A-202ENST00000290037 IKQ13123 557 aaPredicted RBP17.07■□□□□ 0.32
SEC16A-202ENST00000290037 SREK1Q8WXA9 508 aaKnown RBP17.07■□□□□ 0.32
SEC16A-202ENST00000290037 V9GYY5 206 aaPredicted RBP17.07■□□□□ 0.32
SEC16A-202ENST00000290037 STAMBPO95630 424 aa17.07■□□□□ 0.32
SEC16A-202ENST00000290037 PDE4BQ07343 736 aa17.07■□□□□ 0.32
SEC16A-202ENST00000290037 SMC1AQ14683 1233 aaKnown RBP17.07■□□□□ 0.32
SEC16A-202ENST00000290037 BAG3O95817 575 aa17.07■□□□□ 0.32
SEC16A-202ENST00000290037 IFIT5Q13325 482 aaKnown RBP17.06■□□□□ 0.32
SEC16A-202ENST00000290037 ATP7AQ04656 1500 aa17.06■□□□□ 0.32
SEC16A-202ENST00000290037 TOP1P11387 765 aaKnown RBP17.06■□□□□ 0.32
SEC16A-202ENST00000290037 NBPF1Q3BBV0 1214 aa17.06■□□□□ 0.32
SEC16A-202ENST00000290037 MSH6P52701 1360 aa17.06■□□□□ 0.32
SEC16A-202ENST00000290037 C11orf95C9JLR9 678 aaPredicted RBP17.06■□□□□ 0.32
SEC16A-202ENST00000290037 ERMNQ8TAM6 284 aa17.06■□□□□ 0.32
SEC16A-202ENST00000290037 TMEM57Q8N5G2 664 aa17.06■□□□□ 0.32
SEC16A-202ENST00000290037 CUL5Q93034 780 aa17.06■□□□□ 0.32
SEC16A-202ENST00000290037 CROCCP2Q86T23 111 aa17.06■□□□□ 0.32
SEC16A-202ENST00000290037 UQCRHLA0A096LP55 91 aa17.06■□□□□ 0.32
SEC16A-202ENST00000290037 ANKRD18BA2A2Z9 1011 aa17.06■□□□□ 0.32
SEC16A-202ENST00000290037 UQCRHP07919 91 aa17.06■□□□□ 0.32
SEC16A-202ENST00000290037 CASQ1P31415 396 aa17.06■□□□□ 0.32
SEC16A-202ENST00000290037 AIMP1Q12904 312 aaKnown RBP17.06■□□□□ 0.32
SEC16A-202ENST00000290037 NAPBQ9H115 298 aa17.06■□□□□ 0.32
SEC16A-202ENST00000290037 NUCB1Q02818 461 aa17.05■□□□□ 0.32
SEC16A-202ENST00000290037 SYTL4Q96C24 671 aaPredicted RBP17.05■□□□□ 0.32
SEC16A-202ENST00000290037 USP5P45974 858 aa17.05■□□□□ 0.32
SEC16A-202ENST00000290037 SPECC1LQ69YQ0 1117 aa17.05■□□□□ 0.32
SEC16A-202ENST00000290037 TCP11L1Q9NUJ3 509 aa17.05■□□□□ 0.32
SEC16A-202ENST00000290037 NBPF7P0C2Y1 421 aaPredicted RBP17.05■□□□□ 0.32
SEC16A-202ENST00000290037 TMEM132EQ6IEE7 984 aa17.05■□□□□ 0.32
SEC16A-202ENST00000290037 CTR9Q6PD62 1173 aa17.05■□□□□ 0.32
SEC16A-202ENST00000290037 SSH2Q76I76 1423 aa17.05■□□□□ 0.32
SEC16A-202ENST00000290037 CFAP100Q494V2 611 aa17.05■□□□□ 0.32
SEC16A-202ENST00000290037 USP25Q9UHP3 1055 aa17.04■□□□□ 0.32
SEC16A-202ENST00000290037 B4DLN1 442 aa17.04■□□□□ 0.32
SEC16A-202ENST00000290037 MRPL12P52815 198 aaKnown RBP17.04■□□□□ 0.32
SEC16A-202ENST00000290037 PRDM11Q9NQV5 511 aa17.04■□□□□ 0.32
SEC16A-202ENST00000290037 CFAP65Q6ZU64 1925 aaKnown RBP17.04■□□□□ 0.32
SEC16A-202ENST00000290037 FAM193AP78312 1265 aa17.04■□□□□ 0.32
SEC16A-202ENST00000290037 CALML4Q96GE6 196 aa17.04■□□□□ 0.32
SEC16A-202ENST00000290037 SSRP1Q08945 709 aaKnown RBP17.04■□□□□ 0.32
SEC16A-202ENST00000290037 ZFYVE27Q5T4F4 411 aa17.04■□□□□ 0.32
SEC16A-202ENST00000290037 SLC12A7Q9Y666 1083 aa17.04■□□□□ 0.32
SEC16A-202ENST00000290037 NEO1Q92859 1461 aa17.04■□□□□ 0.32
SEC16A-202ENST00000290037 NOS1P29475 1434 aa17.03■□□□□ 0.32
SEC16A-202ENST00000290037 RTL9Q8NET4 1388 aa17.03■□□□□ 0.32
SEC16A-202ENST00000290037 CALML3P27482 149 aa17.03■□□□□ 0.32
SEC16A-202ENST00000290037 TOM1L2Q6ZVM7 507 aa17.03■□□□□ 0.32
SEC16A-202ENST00000290037 PIP4K2BP78356 416 aa17.03■□□□□ 0.32
SEC16A-202ENST00000290037 PLCG2P16885 1265 aa17.03■□□□□ 0.32
SEC16A-202ENST00000290037 LRP2BPQ9P2M1 347 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms