RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 PLPPR3Q6T4P5 718 aa15.91■□□□□ 0.14
SLC28A1-201ENST00000286749 KCNQ3O43525 872 aa15.9■□□□□ 0.14
SLC28A1-201ENST00000286749 HCLS1P14317 486 aaPredicted RBP15.9■□□□□ 0.14
SLC28A1-201ENST00000286749 SASS6Q6UVJ0 657 aa15.9■□□□□ 0.14
SLC28A1-201ENST00000286749 MED1Q15648 1581 aaPredicted RBP15.9■□□□□ 0.14
SLC28A1-201ENST00000286749 ZBTB7CA1YPR0 619 aa15.9■□□□□ 0.14
SLC28A1-201ENST00000286749 GLRX3O76003 335 aaKnown RBP15.9■□□□□ 0.14
SLC28A1-201ENST00000286749 PTH1RQ03431 593 aa15.9■□□□□ 0.14
SLC28A1-201ENST00000286749 HSP90AB4PQ58FF6 505 aa15.9■□□□□ 0.14
SLC28A1-201ENST00000286749 CCDC83Q8IWF9 413 aa15.9■□□□□ 0.14
SLC28A1-201ENST00000286749 ZNF830Q96NB3 372 aaPredicted RBP15.9■□□□□ 0.14
SLC28A1-201ENST00000286749 TTC41PQ6P2S7 1318 aa15.9■□□□□ 0.14
SLC28A1-201ENST00000286749 USP42Q9H9J4 1324 aaKnown RBP15.9■□□□□ 0.14
SLC28A1-201ENST00000286749 HYPKQ9NX55 129 aa15.89■□□□□ 0.13
SLC28A1-201ENST00000286749 SLIT1O75093 1534 aa15.89■□□□□ 0.13
SLC28A1-201ENST00000286749 ADCY9O60503 1353 aa15.89■□□□□ 0.13
SLC28A1-201ENST00000286749 ANKARQ7Z5J8 1434 aa15.89■□□□□ 0.13
SLC28A1-201ENST00000286749 ADCK5Q3MIX3 580 aa15.89■□□□□ 0.13
SLC28A1-201ENST00000286749 ZMYND15Q9H091 742 aa15.89■□□□□ 0.13
SLC28A1-201ENST00000286749 ADCY5O95622 1261 aa15.88■□□□□ 0.13
SLC28A1-201ENST00000286749 GJB2P29033 226 aa15.88■□□□□ 0.13
SLC28A1-201ENST00000286749 PRPF40BQ6NWY9 871 aaKnown RBP15.88■□□□□ 0.13
SLC28A1-201ENST00000286749 JAKMIP1Q96N16 626 aaKnown RBP15.88■□□□□ 0.13
SLC28A1-201ENST00000286749 RGPD2P0DJD1 1756 aa15.88■□□□□ 0.13
SLC28A1-201ENST00000286749 ARHGAP23Q9P227 1491 aa15.88■□□□□ 0.13
SLC28A1-201ENST00000286749 LETM1O95202 739 aaPredicted RBP15.88■□□□□ 0.13
SLC28A1-201ENST00000286749 RUFY2Q8WXA3 655 aa15.88■□□□□ 0.13
SLC28A1-201ENST00000286749 PDRG1Q9NUG6 133 aa15.88■□□□□ 0.13
SLC28A1-201ENST00000286749 ATP6V1DQ9Y5K8 247 aa15.88■□□□□ 0.13
SLC28A1-201ENST00000286749 DYNC1I1O14576 645 aa15.87■□□□□ 0.13
SLC28A1-201ENST00000286749 HOXB7P09629 217 aa15.87■□□□□ 0.13
SLC28A1-201ENST00000286749 CLASRPQ8N2M8 674 aaKnown RBP15.87■□□□□ 0.13
SLC28A1-201ENST00000286749 DNM1Q05193 864 aaKnown RBP15.87■□□□□ 0.13
SLC28A1-201ENST00000286749 NBPF6Q5VWK0 638 aa15.87■□□□□ 0.13
SLC28A1-201ENST00000286749 DDX54Q8TDD1 881 aaKnown RBP15.87■□□□□ 0.13
SLC28A1-201ENST00000286749 NBPF4Q96M43 638 aa15.87■□□□□ 0.13
SLC28A1-201ENST00000286749 ECHDC1Q9NTX5 307 aa15.86■□□□□ 0.13
SLC28A1-201ENST00000286749 DNTTIP2Q5QJE6 756 aaKnown RBP15.86■□□□□ 0.13
SLC28A1-201ENST00000286749 VPS53Q5VIR6 699 aa15.86■□□□□ 0.13
SLC28A1-201ENST00000286749 GIMAP6Q6P9H5 292 aa15.86■□□□□ 0.13
SLC28A1-201ENST00000286749 PA2G4Q9UQ80 394 aaKnown RBP15.86■□□□□ 0.13
SLC28A1-201ENST00000286749 MTMR6Q9Y217 621 aa15.86■□□□□ 0.13
SLC28A1-201ENST00000286749 KCNA6P17658 529 aa15.85■□□□□ 0.13
SLC28A1-201ENST00000286749 MAP7D2Q96T17 732 aa15.85■□□□□ 0.13
SLC28A1-201ENST00000286749 TTC12Q9H892 705 aaPredicted RBP15.85■□□□□ 0.13
SLC28A1-201ENST00000286749 CYP46A1Q9Y6A2 500 aa15.85■□□□□ 0.13
SLC28A1-201ENST00000286749 LMO7Q8WWI1 1683 aa15.85■□□□□ 0.13
SLC28A1-201ENST00000286749 VPS37CA5D8V6 355 aaPredicted RBP15.85■□□□□ 0.13
SLC28A1-201ENST00000286749 BTBD11A6QL63 1104 aa15.85■□□□□ 0.13
SLC28A1-201ENST00000286749 TEFQ10587 303 aa15.85■□□□□ 0.13
SLC28A1-201ENST00000286749 MTX1Q13505 466 aa15.85■□□□□ 0.13
SLC28A1-201ENST00000286749 ZSWIM6Q9HCJ5 1215 aa15.85■□□□□ 0.13
SLC28A1-201ENST00000286749 IFIT2P09913 472 aaKnown RBP15.84■□□□□ 0.13
SLC28A1-201ENST00000286749 ST3GAL1Q11201 340 aa15.84■□□□□ 0.13
SLC28A1-201ENST00000286749 PIBF1Q8WXW3 757 aa15.84■□□□□ 0.13
SLC28A1-201ENST00000286749 IP6K1Q92551 441 aa15.84■□□□□ 0.13
SLC28A1-201ENST00000286749 C9orf78Q9NZ63 289 aaPredicted RBP15.84■□□□□ 0.13
SLC28A1-201ENST00000286749 CHD2O14647 1828 aaKnown RBP15.84■□□□□ 0.13
SLC28A1-201ENST00000286749 C17orf53Q8N3J3 647 aaPredicted RBP15.84■□□□□ 0.13
SLC28A1-201ENST00000286749 GPATCH3Q96I76 525 aa15.84■□□□□ 0.13
SLC28A1-201ENST00000286749 ZSCAN31Q96LW9 406 aaPredicted RBP15.84■□□□□ 0.13
SLC28A1-201ENST00000286749 FUCA2Q9BTY2 467 aa15.84■□□□□ 0.13
SLC28A1-201ENST00000286749 MAP3K2Q9Y2U5 619 aa15.84■□□□□ 0.13
SLC28A1-201ENST00000286749 KDM4AO75164 1064 aa15.83■□□□□ 0.13
SLC28A1-201ENST00000286749 PLCB2Q00722 1185 aa15.83■□□□□ 0.13
SLC28A1-201ENST00000286749 MPRIPQ6WCQ1 1025 aa15.83■□□□□ 0.13
SLC28A1-201ENST00000286749 NECAB1Q8N987 351 aa15.83■□□□□ 0.13
SLC28A1-201ENST00000286749 TM6SF1Q9BZW5 370 aa15.83■□□□□ 0.13
SLC28A1-201ENST00000286749 SH2B1Q9NRF2 756 aaPredicted RBP15.83■□□□□ 0.13
SLC28A1-201ENST00000286749 CCDC171Q6TFL3 1326 aa15.83■□□□□ 0.12
SLC28A1-201ENST00000286749 ME3Q16798 604 aa15.83■□□□□ 0.12
SLC28A1-201ENST00000286749 ZNF530Q6P9A1 599 aaPredicted RBP15.83■□□□□ 0.12
SLC28A1-201ENST00000286749 AACSQ86V21 672 aa15.83■□□□□ 0.12
SLC28A1-201ENST00000286749 KCNB2Q92953 911 aa15.83■□□□□ 0.12
SLC28A1-201ENST00000286749 CHMP4AQ9BY43 222 aa15.83■□□□□ 0.12
SLC28A1-201ENST00000286749 DBF4Q9UBU7 674 aaPredicted RBP15.83■□□□□ 0.12
SLC28A1-201ENST00000286749 NOLC1Q14978 699 aaKnown RBP eCLIP15.82■□□□□ 0.12
SLC28A1-201ENST00000286749 NECTIN1Q15223 517 aa15.82■□□□□ 0.12
SLC28A1-201ENST00000286749 PROSER3Q2NL68 480 aa15.82■□□□□ 0.12
SLC28A1-201ENST00000286749 CWF19L2Q2TBE0 894 aaKnown RBP15.82■□□□□ 0.12
SLC28A1-201ENST00000286749 NFAT5O94916 1531 aa15.82■□□□□ 0.12
SLC28A1-201ENST00000286749 EVI5LQ96CN4 794 aa15.82■□□□□ 0.12
SLC28A1-201ENST00000286749 RBM8AQ9Y5S9 174 aaKnown RBP15.82■□□□□ 0.12
SLC28A1-201ENST00000286749 ZKSCAN1P17029 563 aaPredicted RBP15.81■□□□□ 0.12
SLC28A1-201ENST00000286749 KCNJ4P48050 445 aa15.81■□□□□ 0.12
SLC28A1-201ENST00000286749 LRRC59Q96AG4 307 aaKnown RBP15.81■□□□□ 0.12
SLC28A1-201ENST00000286749 FAM227BQ96M60 508 aa15.81■□□□□ 0.12
SLC28A1-201ENST00000286749 CREB3L3Q68CJ9 461 aa15.81■□□□□ 0.12
SLC28A1-201ENST00000286749 ERC1Q8IUD2 1116 aa15.81■□□□□ 0.12
SLC28A1-201ENST00000286749 ARID3AQ99856 593 aa15.81■□□□□ 0.12
SLC28A1-201ENST00000286749 TPCN1Q9ULQ1 816 aa15.81■□□□□ 0.12
SLC28A1-201ENST00000286749 AP5Z1O43299 807 aa15.81■□□□□ 0.12
SLC28A1-201ENST00000286749 ALDH1L1O75891 902 aa15.81■□□□□ 0.12
SLC28A1-201ENST00000286749 NMIQ13287 307 aaPredicted RBP15.81■□□□□ 0.12
SLC28A1-201ENST00000286749 COL9A3Q14050 684 aaPredicted RBP15.81■□□□□ 0.12
SLC28A1-201ENST00000286749 AKAP4Q5JQC9 854 aa15.81■□□□□ 0.12
SLC28A1-201ENST00000286749 MYRIPQ8NFW9 859 aa15.81■□□□□ 0.12
SLC28A1-201ENST00000286749 PKNOX2Q96KN3 472 aa15.8■□□□□ 0.12
SLC28A1-201ENST00000286749 PHF8Q9UPP1 1060 aa15.8■□□□□ 0.12
SLC28A1-201ENST00000286749 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms