RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 ABCC4O15439 1325 aa27.74■■■□□ 2.03
PDLIM3-203ENST00000284771 DZIP3Q86Y13 1208 aaKnown RBP27.74■■■□□ 2.03
PDLIM3-203ENST00000284771 DZIP1LQ8IYY4 767 aaKnown RBP27.74■■■□□ 2.03
PDLIM3-203ENST00000284771 PLBD2Q8NHP8 589 aa27.74■■■□□ 2.03
PDLIM3-203ENST00000284771 ARXQ96QS3 562 aa27.74■■■□□ 2.03
PDLIM3-203ENST00000284771 PDE3AQ14432 1141 aa27.73■■■□□ 2.03
PDLIM3-203ENST00000284771 ARHGEF1Q92888 912 aaKnown RBP27.73■■■□□ 2.03
PDLIM3-203ENST00000284771 ZBTB3Q9H5J0 574 aa27.73■■■□□ 2.03
PDLIM3-203ENST00000284771 PHF14O94880 888 aa27.72■■■□□ 2.03
PDLIM3-203ENST00000284771 DDX58O95786 925 aaKnown RBP27.72■■■□□ 2.03
PDLIM3-203ENST00000284771 HMGB2P26583 209 aaKnown RBP27.72■■■□□ 2.03
PDLIM3-203ENST00000284771 RIC3Q7Z5B4 369 aa27.72■■■□□ 2.03
PDLIM3-203ENST00000284771 DNAAF4Q8WXU2 420 aa27.72■■■□□ 2.03
PDLIM3-203ENST00000284771 MAP3K15Q6ZN16 1313 aa27.71■■■□□ 2.03
PDLIM3-203ENST00000284771 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.71■■■□□ 2.03
PDLIM3-203ENST00000284771 HLFQ16534 295 aa27.71■■■□□ 2.03
PDLIM3-203ENST00000284771 NPM2Q86SE8 214 aaKnown RBP27.71■■■□□ 2.03
PDLIM3-203ENST00000284771 TMEM57Q8N5G2 664 aa27.71■■■□□ 2.03
PDLIM3-203ENST00000284771 TRAPPC3LQ5T215 181 aa27.7■■■□□ 2.02
PDLIM3-203ENST00000284771 SLC4A10Q6U841 1118 aa27.7■■■□□ 2.02
PDLIM3-203ENST00000284771 FTSJ3Q8IY81 847 aaKnown RBP27.7■■■□□ 2.02
PDLIM3-203ENST00000284771 TFCP2L1Q9NZI6 479 aa27.7■■■□□ 2.02
PDLIM3-203ENST00000284771 ARFGEF2Q9Y6D5 1785 aa27.7■■■□□ 2.02
PDLIM3-203ENST00000284771 TUBGCP6Q96RT7 1819 aa27.7■■■□□ 2.02
PDLIM3-203ENST00000284771 CAMTA2O94983 1202 aa27.69■■■□□ 2.02
PDLIM3-203ENST00000284771 KIF6Q6ZMV9 814 aa27.69■■■□□ 2.02
PDLIM3-203ENST00000284771 SSFA2P28290 1259 aa27.68■■■□□ 2.02
PDLIM3-203ENST00000284771 SLC15A2Q16348 729 aa27.68■■■□□ 2.02
PDLIM3-203ENST00000284771 METTL22Q9BUU2 404 aaPredicted RBP27.68■■■□□ 2.02
PDLIM3-203ENST00000284771 C4AP0C0L4 1744 aa27.68■■■□□ 2.02
PDLIM3-203ENST00000284771 BEND3Q5T5X7 828 aa27.68■■■□□ 2.02
PDLIM3-203ENST00000284771 COG6Q9Y2V7 657 aa27.68■■■□□ 2.02
PDLIM3-203ENST00000284771 A0A087WZG4 1122 aa27.67■■■□□ 2.02
PDLIM3-203ENST00000284771 ERVV-1B6SEH8 477 aa27.67■■■□□ 2.02
PDLIM3-203ENST00000284771 INTS3Q68E01 1043 aaKnown RBP27.67■■■□□ 2.02
PDLIM3-203ENST00000284771 SRP68Q9UHB9 627 aaKnown RBP27.67■■■□□ 2.02
PDLIM3-203ENST00000284771 NUP98P52948 1817 aa27.66■■■□□ 2.02
PDLIM3-203ENST00000284771 ADRA2BP18089 450 aa27.66■■■□□ 2.02
PDLIM3-203ENST00000284771 GIGYF2Q6Y7W6 1299 aaKnown RBP27.66■■■□□ 2.02
PDLIM3-203ENST00000284771 BCL2L12Q9HB09 334 aa27.66■■■□□ 2.02
PDLIM3-203ENST00000284771 NARFQ9UHQ1 456 aa27.66■■■□□ 2.02
PDLIM3-203ENST00000284771 IGKV5-2P06315 115 aa27.65■■■□□ 2.02
PDLIM3-203ENST00000284771 MS4A1P11836 297 aa27.65■■■□□ 2.02
PDLIM3-203ENST00000284771 COL23A1Q86Y22 540 aaPredicted RBP27.65■■■□□ 2.02
PDLIM3-203ENST00000284771 MYD88Q99836 296 aa27.65■■■□□ 2.02
PDLIM3-203ENST00000284771 PNPLA7Q6ZV29 1317 aa27.64■■■□□ 2.02
PDLIM3-203ENST00000284771 RFC4P35249 363 aa27.64■■■□□ 2.02
PDLIM3-203ENST00000284771 CWF19L2Q2TBE0 894 aaKnown RBP27.64■■■□□ 2.02
PDLIM3-203ENST00000284771 USPL1Q5W0Q7 1092 aa27.64■■■□□ 2.02
PDLIM3-203ENST00000284771 CRBNQ96SW2 442 aa27.64■■■□□ 2.02
PDLIM3-203ENST00000284771 BCORQ6W2J9 1755 aa27.63■■■□□ 2.01
PDLIM3-203ENST00000284771 ATP5J2-PTCD1G3V325 749 aa27.63■■■□□ 2.01
PDLIM3-203ENST00000284771 STK32BQ9NY57 414 aa27.63■■■□□ 2.01
PDLIM3-203ENST00000284771 ATP10DQ9P241 1426 aa27.63■■■□□ 2.01
PDLIM3-203ENST00000284771 USP42Q9H9J4 1324 aaKnown RBP27.63■■■□□ 2.01
PDLIM3-203ENST00000284771 PXDNLA1KZ92 1463 aa27.63■■■□□ 2.01
PDLIM3-203ENST00000284771 TCIRG1Q13488 830 aa27.62■■■□□ 2.01
PDLIM3-203ENST00000284771 MVPQ14764 893 aaKnown RBP27.62■■■□□ 2.01
PDLIM3-203ENST00000284771 ITPRIPQ8IWB1 547 aa27.62■■■□□ 2.01
PDLIM3-203ENST00000284771 LINS1Q8NG48 757 aa27.62■■■□□ 2.01
PDLIM3-203ENST00000284771 N4BP2Q86UW6 1770 aaPredicted RBP27.61■■■□□ 2.01
PDLIM3-203ENST00000284771 ZPR1O75312 459 aa27.61■■■□□ 2.01
PDLIM3-203ENST00000284771 CCT4P50991 539 aaKnown RBP27.61■■■□□ 2.01
PDLIM3-203ENST00000284771 SRCIN1Q9C0H9 1055 aa27.61■■■□□ 2.01
PDLIM3-203ENST00000284771 SCN7AQ01118 1682 aa27.6■■■□□ 2.01
PDLIM3-203ENST00000284771 EXOC6Q8TAG9 804 aa27.6■■■□□ 2.01
PDLIM3-203ENST00000284771 ISCA1Q9BUE6 129 aa27.6■■■□□ 2.01
PDLIM3-203ENST00000284771 NEURL1BA8MQ27 555 aa27.59■■■□□ 2.01
PDLIM3-203ENST00000284771 CLEC4GQ6UXB4 293 aa27.59■■■□□ 2.01
PDLIM3-203ENST00000284771 NEXNQ0ZGT2 675 aa27.59■■■□□ 2.01
PDLIM3-203ENST00000284771 ZNF34Q8IZ26 560 aa27.59■■■□□ 2.01
PDLIM3-203ENST00000284771 PDGFDQ9GZP0 370 aaPredicted RBP27.59■■■□□ 2.01
PDLIM3-203ENST00000284771 ZBTB7BO15156 539 aaPredicted RBP27.58■■■□□ 2.01
PDLIM3-203ENST00000284771 GYS1P13807 737 aa27.58■■■□□ 2.01
PDLIM3-203ENST00000284771 GPTP24298 496 aa27.57■■■□□ 2
PDLIM3-203ENST00000284771 FLAD1Q8NFF5 587 aa27.57■■■□□ 2
PDLIM3-203ENST00000284771 USP44Q9H0E7 712 aa27.57■■■□□ 2
PDLIM3-203ENST00000284771 QSER1Q2KHR3 1735 aa27.57■■■□□ 2
PDLIM3-203ENST00000284771 RGL2O15211 777 aa27.56■■■□□ 2
PDLIM3-203ENST00000284771 ALDH1L1O75891 902 aa27.56■■■□□ 2
PDLIM3-203ENST00000284771 TRIM28Q13263 835 aaKnown RBP27.56■■■□□ 2
PDLIM3-203ENST00000284771 FKBP8Q14318 412 aa27.56■■■□□ 2
PDLIM3-203ENST00000284771 ANKRD36CQ5JPF3 1778 aa27.56■■■□□ 2
PDLIM3-203ENST00000284771 UBN2Q6ZU65 1347 aa27.56■■■□□ 2
PDLIM3-203ENST00000284771 TBC1D9BQ66K14 1250 aa27.56■■■□□ 2
PDLIM3-203ENST00000284771 GCKRQ14397 625 aa27.55■■■□□ 2
PDLIM3-203ENST00000284771 HSP90AB3PQ58FF7 597 aa27.55■■■□□ 2
PDLIM3-203ENST00000284771 MEIS3Q99687 375 aa27.55■■■□□ 2
PDLIM3-203ENST00000284771 DDX19BQ9UMR2 479 aa27.55■■■□□ 2
PDLIM3-203ENST00000284771 AFDNP55196 1824 aaKnown RBP27.55■■■□□ 2
PDLIM3-203ENST00000284771 ZNF652Q9Y2D9 606 aa27.54■■■□□ 2
PDLIM3-203ENST00000284771 MSH5O43196 834 aa27.53■■■□□ 2
PDLIM3-203ENST00000284771 NEFLP07196 543 aa27.53■■■□□ 2
PDLIM3-203ENST00000284771 NLRP10Q86W26 655 aa27.53■■■□□ 2
PDLIM3-203ENST00000284771 CCDC191Q8NCU4 936 aa27.53■■■□□ 2
PDLIM3-203ENST00000284771 NBPF7P0C2Y1 421 aaPredicted RBP27.52■■■□□ 2
PDLIM3-203ENST00000284771 NIP7Q9Y221 180 aaKnown RBP eCLIP27.52■■■□□ 2
PDLIM3-203ENST00000284771 BICDL1Q6ZP65 573 aa27.52■■■□□ 2
PDLIM3-203ENST00000284771 JARID2Q92833 1246 aaPredicted RBP27.51■■□□□ 1.99
PDLIM3-203ENST00000284771 ZBTB40Q9NUA8 1239 aa27.51■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms