RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 RAB3GAP1Q15042 981 aa19.04■□□□□ 0.64
SH3RF1-201ENST00000284637 CAMSAP2Q08AD1 1489 aa19.04■□□□□ 0.64
SH3RF1-201ENST00000284637 ZSCAN22P10073 491 aaPredicted RBP19.04■□□□□ 0.64
SH3RF1-201ENST00000284637 RASSF4Q9H2L5 321 aa19.04■□□□□ 0.64
SH3RF1-201ENST00000284637 GABPB1Q06547 395 aaPredicted RBP19.04■□□□□ 0.64
SH3RF1-201ENST00000284637 INCENPQ9NQS7 918 aa19.04■□□□□ 0.64
SH3RF1-201ENST00000284637 CCDC141Q6ZP82 1450 aa19.04■□□□□ 0.64
SH3RF1-201ENST00000284637 RAB11FIP4Q86YS3 637 aa19.04■□□□□ 0.64
SH3RF1-201ENST00000284637 FKBP15Q5T1M5 1219 aa19.03■□□□□ 0.64
SH3RF1-201ENST00000284637 USP48Q86UV5 1035 aa19.03■□□□□ 0.64
SH3RF1-201ENST00000284637 TNNQ9UQP3 1299 aa19.03■□□□□ 0.64
SH3RF1-201ENST00000284637 SLC12A7Q9Y666 1083 aa19.03■□□□□ 0.64
SH3RF1-201ENST00000284637 IGHMBP2P38935 993 aaKnown RBP19.03■□□□□ 0.64
SH3RF1-201ENST00000284637 CACNA2D4Q7Z3S7 1137 aa19.03■□□□□ 0.64
SH3RF1-201ENST00000284637 TCEANC2Q96MN5 208 aa19.03■□□□□ 0.64
SH3RF1-201ENST00000284637 CCDC196A0A1B0GTZ2 297 aa19.03■□□□□ 0.64
SH3RF1-201ENST00000284637 POTEB2H3BUK9 544 aa19.03■□□□□ 0.64
SH3RF1-201ENST00000284637 FBLN1P23142 703 aa19.03■□□□□ 0.64
SH3RF1-201ENST00000284637 MCM3P25205 808 aa19.03■□□□□ 0.64
SH3RF1-201ENST00000284637 MICALCLQ6ZW33 695 aa19.03■□□□□ 0.64
SH3RF1-201ENST00000284637 SMC5Q8IY18 1101 aa19.02■□□□□ 0.64
SH3RF1-201ENST00000284637 CCDC113Q9H0I3 377 aa19.02■□□□□ 0.64
SH3RF1-201ENST00000284637 CAVIN2O95810 425 aa19.02■□□□□ 0.64
SH3RF1-201ENST00000284637 CCDC186Q7Z3E2 898 aa19.02■□□□□ 0.64
SH3RF1-201ENST00000284637 DYDC1Q8WWB3 177 aa19.02■□□□□ 0.64
SH3RF1-201ENST00000284637 SMARCC1Q92922 1105 aaPredicted RBP19.02■□□□□ 0.64
SH3RF1-201ENST00000284637 MEIS3Q99687 375 aa19.02■□□□□ 0.64
SH3RF1-201ENST00000284637 USP16Q9Y5T5 823 aa19.02■□□□□ 0.64
SH3RF1-201ENST00000284637 DBF4Q9UBU7 674 aaPredicted RBP19.02■□□□□ 0.63
SH3RF1-201ENST00000284637 GOLGA8AA7E2F4 631 aa19.02■□□□□ 0.63
SH3RF1-201ENST00000284637 GNG11P61952 73 aa19.02■□□□□ 0.63
SH3RF1-201ENST00000284637 BICDL1Q6ZP65 573 aa19.02■□□□□ 0.63
SH3RF1-201ENST00000284637 LUZP1Q86V48 1076 aa19.02■□□□□ 0.63
SH3RF1-201ENST00000284637 GOLIM4O00461 696 aa19.01■□□□□ 0.63
SH3RF1-201ENST00000284637 IFIT3O14879 490 aaKnown RBP19.01■□□□□ 0.63
SH3RF1-201ENST00000284637 HAND2P61296 217 aa19.01■□□□□ 0.63
SH3RF1-201ENST00000284637 ZRSR2Q15696 482 aaKnown RBP19.01■□□□□ 0.63
SH3RF1-201ENST00000284637 CCDC144CPQ8IYA2 1237 aa19.01■□□□□ 0.63
SH3RF1-201ENST00000284637 MYRIPQ8NFW9 859 aa19.01■□□□□ 0.63
SH3RF1-201ENST00000284637 NEK1Q96PY6 1258 aa19.01■□□□□ 0.63
SH3RF1-201ENST00000284637 ORC3Q9UBD5 711 aaPredicted RBP19.01■□□□□ 0.63
SH3RF1-201ENST00000284637 A0A087WZG4 1122 aa19.01■□□□□ 0.63
SH3RF1-201ENST00000284637 RANBP6O60518 1105 aaKnown RBP19■□□□□ 0.63
SH3RF1-201ENST00000284637 SEC24BO95487 1268 aa19■□□□□ 0.63
SH3RF1-201ENST00000284637 YEATS4O95619 227 aa19■□□□□ 0.63
SH3RF1-201ENST00000284637 C16orf71Q8IYS4 520 aaPredicted RBP19■□□□□ 0.63
SH3RF1-201ENST00000284637 SNRKQ9NRH2 765 aa19■□□□□ 0.63
SH3RF1-201ENST00000284637 ZNF76P36508 570 aa19■□□□□ 0.63
SH3RF1-201ENST00000284637 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19■□□□□ 0.63
SH3RF1-201ENST00000284637 PAFAH1B1P43034 410 aa19■□□□□ 0.63
SH3RF1-201ENST00000284637 SSR1P43307 286 aaKnown RBP19■□□□□ 0.63
SH3RF1-201ENST00000284637 ANO6Q4KMQ2 910 aa19■□□□□ 0.63
SH3RF1-201ENST00000284637 PI4KAP2A4QPH2 592 aa19■□□□□ 0.63
SH3RF1-201ENST00000284637 SSRP1Q08945 709 aaKnown RBP19■□□□□ 0.63
SH3RF1-201ENST00000284637 ZSCAN29Q8IWY8 852 aaPredicted RBP19■□□□□ 0.63
SH3RF1-201ENST00000284637 PI4KAP1Q8N8J0 262 aa19■□□□□ 0.63
SH3RF1-201ENST00000284637 CTCFLQ8NI51 663 aaPredicted RBP19■□□□□ 0.63
SH3RF1-201ENST00000284637 RBM5P52756 815 aaKnown RBP eCLIP18.99■□□□□ 0.63
SH3RF1-201ENST00000284637 SLU7O95391 586 aaKnown RBP18.99■□□□□ 0.63
SH3RF1-201ENST00000284637 PDE1AP54750 535 aa18.99■□□□□ 0.63
SH3RF1-201ENST00000284637 VGLL3A8MV65 326 aa18.99■□□□□ 0.63
SH3RF1-201ENST00000284637 SKILP12757 684 aa18.99■□□□□ 0.63
SH3RF1-201ENST00000284637 ARFGAP3Q9NP61 516 aa18.99■□□□□ 0.63
SH3RF1-201ENST00000284637 MAP3K2Q9Y2U5 619 aa18.99■□□□□ 0.63
SH3RF1-201ENST00000284637 TDRD12Q587J7 1177 aaKnown RBP18.99■□□□□ 0.63
SH3RF1-201ENST00000284637 BRF1Q92994 677 aa18.99■□□□□ 0.63
SH3RF1-201ENST00000284637 ZFP91Q96JP5 570 aaPredicted RBP18.99■□□□□ 0.63
SH3RF1-201ENST00000284637 ANXA1P04083 346 aa18.98■□□□□ 0.63
SH3RF1-201ENST00000284637 IL16Q14005 1332 aa18.98■□□□□ 0.63
SH3RF1-201ENST00000284637 CCDC12Q8WUD4 166 aaPredicted RBP18.98■□□□□ 0.63
SH3RF1-201ENST00000284637 SCAF11Q99590 1463 aaKnown RBP18.98■□□□□ 0.63
SH3RF1-201ENST00000284637 IFIT5Q13325 482 aaKnown RBP18.98■□□□□ 0.63
SH3RF1-201ENST00000284637 ANKRD18AQ8IVF6 992 aa18.98■□□□□ 0.63
SH3RF1-201ENST00000284637 RHPN1Q8TCX5 695 aa18.98■□□□□ 0.63
SH3RF1-201ENST00000284637 KCNH5Q8NCM2 988 aa18.98■□□□□ 0.63
SH3RF1-201ENST00000284637 SNAPC4Q5SXM2 1469 aa18.98■□□□□ 0.63
SH3RF1-201ENST00000284637 USO1O60763 962 aaKnown RBP18.98■□□□□ 0.63
SH3RF1-201ENST00000284637 RLBP1P12271 317 aa18.98■□□□□ 0.63
SH3RF1-201ENST00000284637 TTC31Q49AM3 519 aaPredicted RBP18.98■□□□□ 0.63
SH3RF1-201ENST00000284637 CCDC178Q5BJE1 867 aa18.98■□□□□ 0.63
SH3RF1-201ENST00000284637 RNF187Q5TA31 235 aaPredicted RBP18.98■□□□□ 0.63
SH3RF1-201ENST00000284637 MICU3Q86XE3 530 aa18.98■□□□□ 0.63
SH3RF1-201ENST00000284637 FAM200AQ8TCP9 573 aa18.97■□□□□ 0.63
SH3RF1-201ENST00000284637 LRRC2Q9BYS8 371 aa18.97■□□□□ 0.63
SH3RF1-201ENST00000284637 BCCIPQ9P287 314 aaKnown RBP eCLIP18.97■□□□□ 0.63
SH3RF1-201ENST00000284637 IARSP41252 1262 aaKnown RBP18.97■□□□□ 0.63
SH3RF1-201ENST00000284637 MAP3K12Q12852 859 aa18.97■□□□□ 0.63
SH3RF1-201ENST00000284637 ESYT1Q9BSJ8 1104 aa18.97■□□□□ 0.63
SH3RF1-201ENST00000284637 DACT1Q9NYF0 836 aa18.97■□□□□ 0.63
SH3RF1-201ENST00000284637 STARD3NLO95772 234 aa18.97■□□□□ 0.63
SH3RF1-201ENST00000284637 HSP90AA4PQ58FG1 418 aa18.97■□□□□ 0.63
SH3RF1-201ENST00000284637 GOLGA6L9A6NEM1 432 aa18.97■□□□□ 0.63
SH3RF1-201ENST00000284637 C10orf67Q8IYJ2 551 aa18.97■□□□□ 0.63
SH3RF1-201ENST00000284637 ARHGAP45Q92619 1136 aa18.97■□□□□ 0.63
SH3RF1-201ENST00000284637 PHAXQ9H814 394 aaKnown RBP18.97■□□□□ 0.63
SH3RF1-201ENST00000284637 MKNK2Q9HBH9 465 aa18.97■□□□□ 0.63
SH3RF1-201ENST00000284637 DNM1Q05193 864 aaKnown RBP18.96■□□□□ 0.63
SH3RF1-201ENST00000284637 IFFO1Q0D2I5 559 aa18.96■□□□□ 0.63
SH3RF1-201ENST00000284637 HYPKQ9NX55 129 aa18.96■□□□□ 0.63
SH3RF1-201ENST00000284637 MAP2K1Q02750 393 aaPredicted RBP18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms