RNA–Protein interactions for RNA: ENST00000278916.7

CHEK1-201, Transcript of checkpoint kinase 1, humanhuman

TSL 5 BASIC

Gene CHEK1, Length 1,712 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-201ENST00000278916 VAMP4O75379 141 aa15.21■□□□□ 0.03
CHEK1-201ENST00000278916 COPS6Q7L5N1 327 aa15.21■□□□□ 0.03
CHEK1-201ENST00000278916 DDX21Q9NR30 783 aaKnown RBP eCLIP15.21■□□□□ 0.03
CHEK1-201ENST00000278916 POLD1P28340 1107 aa15.2■□□□□ 0.02
CHEK1-201ENST00000278916 TBC1D9BQ66K14 1250 aa15.2■□□□□ 0.02
CHEK1-201ENST00000278916 DBF4Q9UBU7 674 aaPredicted RBP15.2■□□□□ 0.02
CHEK1-201ENST00000278916 BCORQ6W2J9 1755 aa15.2■□□□□ 0.02
CHEK1-201ENST00000278916 LRP5O75197 1615 aa15.2■□□□□ 0.02
CHEK1-201ENST00000278916 ERBB4Q15303 1308 aa15.2■□□□□ 0.02
CHEK1-201ENST00000278916 DDR1Q08345 913 aa15.2■□□□□ 0.02
CHEK1-201ENST00000278916 ZBED9Q6R2W3 1325 aa15.19■□□□□ 0.02
CHEK1-201ENST00000278916 NFIXQ14938 502 aa15.19■□□□□ 0.02
CHEK1-201ENST00000278916 CCDC30Q5VVM6 783 aa15.19■□□□□ 0.02
CHEK1-201ENST00000278916 KIF6Q6ZMV9 814 aa15.19■□□□□ 0.02
CHEK1-201ENST00000278916 G2E3Q7L622 706 aa15.19■□□□□ 0.02
CHEK1-201ENST00000278916 NLGN1Q8N2Q7 840 aa15.19■□□□□ 0.02
CHEK1-201ENST00000278916 COL24A1Q17RW2 1714 aa15.19■□□□□ 0.02
CHEK1-201ENST00000278916 FAM177BA6PVY3 158 aa15.18■□□□□ 0.02
CHEK1-201ENST00000278916 TRMT2AQ8IZ69 625 aaKnown RBP15.18■□□□□ 0.02
CHEK1-201ENST00000278916 CCDC24Q8N4L8 307 aa15.18■□□□□ 0.02
CHEK1-201ENST00000278916 BCL2L13Q9BXK5 485 aa15.18■□□□□ 0.02
CHEK1-201ENST00000278916 MAP3K15Q6ZN16 1313 aa15.18■□□□□ 0.02
CHEK1-201ENST00000278916 SLC4A2P04920 1241 aa15.17■□□□□ 0.02
CHEK1-201ENST00000278916 GPTP24298 496 aa15.17■□□□□ 0.02
CHEK1-201ENST00000278916 STK31Q9BXU1 1019 aa15.17■□□□□ 0.02
CHEK1-201ENST00000278916 FHDC1Q9C0D6 1143 aaPredicted RBP15.17■□□□□ 0.02
CHEK1-201ENST00000278916 POLRMTO00411 1230 aaKnown RBP15.16■□□□□ 0.02
CHEK1-201ENST00000278916 TM4SF1P30408 202 aa15.16■□□□□ 0.02
CHEK1-201ENST00000278916 HYPKQ9NX55 129 aa15.16■□□□□ 0.02
CHEK1-201ENST00000278916 PARP3Q9Y6F1 533 aa15.16■□□□□ 0.02
CHEK1-201ENST00000278916 NUP98P52948 1817 aa15.16■□□□□ 0.02
CHEK1-201ENST00000278916 WWC3Q9ULE0 1092 aa15.15■□□□□ 0.02
CHEK1-201ENST00000278916 NIP7Q9Y221 180 aaKnown RBP eCLIP15.15■□□□□ 0.02
CHEK1-201ENST00000278916 NLGN2Q8NFZ4 835 aa15.14■□□□□ 0.01
CHEK1-201ENST00000278916 ZNF652Q9Y2D9 606 aa15.14■□□□□ 0.01
CHEK1-201ENST00000278916 UBN2Q6ZU65 1347 aa15.14■□□□□ 0.01
CHEK1-201ENST00000278916 AFDNP55196 1824 aaKnown RBP15.14■□□□□ 0.01
CHEK1-201ENST00000278916 SERPINB2P05120 415 aa15.13■□□□□ 0.01
CHEK1-201ENST00000278916 ANKRD13DQ6ZTN6 518 aa15.13■□□□□ 0.01
CHEK1-201ENST00000278916 SETDB2Q96T68 719 aa15.13■□□□□ 0.01
CHEK1-201ENST00000278916 CARMIL3Q8ND23 1372 aa15.13■□□□□ 0.01
CHEK1-201ENST00000278916 ERVV-1B6SEH8 477 aa15.12■□□□□ 0.01
CHEK1-201ENST00000278916 ATP5J2-PTCD1G3V325 749 aa15.12■□□□□ 0.01
CHEK1-201ENST00000278916 GIGYF2Q6Y7W6 1299 aaKnown RBP15.12■□□□□ 0.01
CHEK1-201ENST00000278916 RIC3Q7Z5B4 369 aa15.12■□□□□ 0.01
CHEK1-201ENST00000278916 SSH1Q8WYL5 1049 aa15.12■□□□□ 0.01
CHEK1-201ENST00000278916 ARFGEF2Q9Y6D5 1785 aa15.12■□□□□ 0.01
CHEK1-201ENST00000278916 FLIIQ13045 1269 aa15.12■□□□□ 0.01
CHEK1-201ENST00000278916 CLEC4GQ6UXB4 293 aa15.12■□□□□ 0.01
CHEK1-201ENST00000278916 PLBD2Q8NHP8 589 aa15.12■□□□□ 0.01
CHEK1-201ENST00000278916 PI4KAP2A4QPH2 592 aa15.11■□□□□ 0.01
CHEK1-201ENST00000278916 NPHP1O15259 732 aa15.11■□□□□ 0.01
CHEK1-201ENST00000278916 FKBP5Q13451 457 aaPredicted RBP15.11■□□□□ 0.01
CHEK1-201ENST00000278916 NUTM1Q86Y26 1132 aa15.11■□□□□ 0.01
CHEK1-201ENST00000278916 PI4KAP1Q8N8J0 262 aa15.11■□□□□ 0.01
CHEK1-201ENST00000278916 SYT17Q9BSW7 474 aa15.11■□□□□ 0.01
CHEK1-201ENST00000278916 MAP3K2Q9Y2U5 619 aa15.11■□□□□ 0.01
CHEK1-201ENST00000278916 ADCY9O60503 1353 aa15.11■□□□□ 0.01
CHEK1-201ENST00000278916 F6X3S4 739 aa15.1■□□□□ 0.01
CHEK1-201ENST00000278916 NBPF5PQ86XG9 351 aaPredicted RBP15.1■□□□□ 0.01
CHEK1-201ENST00000278916 MYD88Q99836 296 aa15.1■□□□□ 0.01
CHEK1-201ENST00000278916 SUSD4Q5VX71 490 aa15.09■□□□□ 0.01
CHEK1-201ENST00000278916 PRR5LQ6MZQ0 368 aa15.09■□□□□ 0.01
CHEK1-201ENST00000278916 ZNF34Q8IZ26 560 aa15.09■□□□□ 0.01
CHEK1-201ENST00000278916 MRPL50Q8N5N7 158 aaKnown RBP15.09■□□□□ 0.01
CHEK1-201ENST00000278916 SMC4Q9NTJ3 1288 aa15.09■□□□□ 0.01
CHEK1-201ENST00000278916 ATP10DQ9P241 1426 aa15.09■□□□□ 0.01
CHEK1-201ENST00000278916 ANKRD36CQ5JPF3 1778 aa15.09■□□□□ 0.01
CHEK1-201ENST00000278916 TCIRG1Q13488 830 aa15.09■□□□□ 0.01
CHEK1-201ENST00000278916 RTL5Q5HYW3 569 aaPredicted RBP15.09■□□□□ 0.01
CHEK1-201ENST00000278916 SYNE4Q8N205 404 aa15.09■□□□□ 0.01
CHEK1-201ENST00000278916 CNBD1Q8NA66 436 aa15.09■□□□□ 0.01
CHEK1-201ENST00000278916 CHMP4AQ9BY43 222 aa15.09■□□□□ 0.01
CHEK1-201ENST00000278916 C10orf71Q711Q0 1435 aa15.08■□□□□ 0.01
CHEK1-201ENST00000278916 JARID2Q92833 1246 aaPredicted RBP15.08■□□□□ 0
CHEK1-201ENST00000278916 NRXN2Q9P2S2 1712 aa15.08■□□□□ 0
CHEK1-201ENST00000278916 N4BP2Q86UW6 1770 aaPredicted RBP15.07■□□□□ 0
CHEK1-201ENST00000278916 A0A0G2JLW4 131 aa15.07■□□□□ 0
CHEK1-201ENST00000278916 BCAR3O75815 825 aa15.07■□□□□ 0
CHEK1-201ENST00000278916 DDX58O95786 925 aaKnown RBP15.07■□□□□ 0
CHEK1-201ENST00000278916 CHRNA5P30532 468 aa15.07■□□□□ 0
CHEK1-201ENST00000278916 KSR2Q6VAB6 950 aa15.07■□□□□ 0
CHEK1-201ENST00000278916 ABCC12Q96J65 1359 aa15.06■□□□□ 0
CHEK1-201ENST00000278916 CENPBP07199 599 aaPredicted RBP15.06■□□□□ 0
CHEK1-201ENST00000278916 GTF2E1P29083 439 aaPredicted RBP15.06■□□□□ 0
CHEK1-201ENST00000278916 RARSP54136 660 aaKnown RBP15.06■□□□□ 0
CHEK1-201ENST00000278916 CWF19L2Q2TBE0 894 aaKnown RBP15.06■□□□□ 0
CHEK1-201ENST00000278916 ERFEQ4G0M1 354 aa15.06■□□□□ 0
CHEK1-201ENST00000278916 NLRP10Q86W26 655 aa15.06■□□□□ 0
CHEK1-201ENST00000278916 ANKRD31Q8N7Z5 1873 aa15.06■□□□□ 0
CHEK1-201ENST00000278916 NTSR2O95665 410 aa15.06■□□□□ 0
CHEK1-201ENST00000278916 PELP1Q8IZL8 1130 aaKnown RBP15.06■□□□□ 0
CHEK1-201ENST00000278916 METTL22Q9BUU2 404 aaPredicted RBP15.06■□□□□ 0
CHEK1-201ENST00000278916 CACNA1FO60840 1977 aa15.05■□□□□ -0
CHEK1-201ENST00000278916 IGKV5-2P06315 115 aa15.05■□□□□ -0
CHEK1-201ENST00000278916 DPEP1P16444 411 aa15.05■□□□□ -0
CHEK1-201ENST00000278916 HSP90AB3PQ58FF7 597 aa15.05■□□□□ -0
CHEK1-201ENST00000278916 SLC4A10Q6U841 1118 aa15.05■□□□□ -0
CHEK1-201ENST00000278916 ISCA1Q9BUE6 129 aa15.05■□□□□ -0
CHEK1-201ENST00000278916 CD2APQ9Y5K6 639 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms