RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 MPRIPQ6WCQ1 1025 aa30.44■■■□□ 2.46
ROM1-201ENST00000278833 IL1RAPL2Q9NP60 686 aa30.44■■■□□ 2.46
ROM1-201ENST00000278833 KSR2Q6VAB6 950 aa30.43■■■□□ 2.46
ROM1-201ENST00000278833 SGSM2O43147 1006 aa30.42■■■□□ 2.46
ROM1-201ENST00000278833 ZC3H6P61129 1189 aaKnown RBP30.42■■■□□ 2.46
ROM1-201ENST00000278833 PKP1Q13835 747 aa30.42■■■□□ 2.46
ROM1-201ENST00000278833 CNTROBQ8N137 903 aa30.42■■■□□ 2.46
ROM1-201ENST00000278833 MCTP1Q6DN14 999 aa30.42■■■□□ 2.46
ROM1-201ENST00000278833 RRAGDQ9NQL2 400 aaPredicted RBP30.42■■■□□ 2.46
ROM1-201ENST00000278833 HYPKQ9NX55 129 aa30.42■■■□□ 2.46
ROM1-201ENST00000278833 MRC1P22897 1456 aa30.41■■■□□ 2.46
ROM1-201ENST00000278833 COL18A1P39060 1754 aa30.41■■■□□ 2.46
ROM1-201ENST00000278833 BRD1O95696 1058 aa30.4■■■□□ 2.46
ROM1-201ENST00000278833 NUTM1Q86Y26 1132 aa30.4■■■□□ 2.46
ROM1-201ENST00000278833 ERC1Q8IUD2 1116 aa30.4■■■□□ 2.46
ROM1-201ENST00000278833 C8orf37Q96NL8 207 aa30.4■■■□□ 2.46
ROM1-201ENST00000278833 C5P01031 1676 aa30.4■■■□□ 2.46
ROM1-201ENST00000278833 GLRX3O76003 335 aaKnown RBP30.39■■■□□ 2.46
ROM1-201ENST00000278833 ERBB3P21860 1342 aa30.39■■■□□ 2.46
ROM1-201ENST00000278833 MAP3K2Q9Y2U5 619 aa30.37■■■□□ 2.45
ROM1-201ENST00000278833 PKD1L3Q7Z443 1732 aa30.36■■■□□ 2.45
ROM1-201ENST00000278833 NGLY1Q96IV0 654 aa30.36■■■□□ 2.45
ROM1-201ENST00000278833 ARXQ96QS3 562 aa30.36■■■□□ 2.45
ROM1-201ENST00000278833 DDX21Q9NR30 783 aaKnown RBP eCLIP30.36■■■□□ 2.45
ROM1-201ENST00000278833 LINS1Q8NG48 757 aa30.36■■■□□ 2.45
ROM1-201ENST00000278833 LSG1Q9H089 658 aaKnown RBP30.36■■■□□ 2.45
ROM1-201ENST00000278833 CLCN1P35523 988 aa30.35■■■□□ 2.45
ROM1-201ENST00000278833 IL25Q9H293 177 aa30.35■■■□□ 2.45
ROM1-201ENST00000278833 PRDM11Q9NQV5 511 aa30.35■■■□□ 2.45
ROM1-201ENST00000278833 PPP1R9BQ96SB3 815 aa30.34■■■□□ 2.45
ROM1-201ENST00000278833 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.34■■■□□ 2.45
ROM1-201ENST00000278833 PARP4Q9UKK3 1724 aaKnown RBP30.34■■■□□ 2.45
ROM1-201ENST00000278833 CPDO75976 1380 aa30.34■■■□□ 2.45
ROM1-201ENST00000278833 ZBTB7CA1YPR0 619 aa30.33■■■□□ 2.45
ROM1-201ENST00000278833 DDX58O95786 925 aaKnown RBP30.33■■■□□ 2.45
ROM1-201ENST00000278833 CHRNA2Q15822 529 aa30.33■■■□□ 2.45
ROM1-201ENST00000278833 CLASRPQ8N2M8 674 aaKnown RBP30.33■■■□□ 2.45
ROM1-201ENST00000278833 AXIN2Q9Y2T1 843 aa30.33■■■□□ 2.45
ROM1-201ENST00000278833 KDM6AO15550 1401 aaPredicted RBP30.32■■■□□ 2.44
ROM1-201ENST00000278833 CCDC173Q0VFZ6 552 aa30.32■■■□□ 2.44
ROM1-201ENST00000278833 MBD3O95983 291 aa30.31■■■□□ 2.44
ROM1-201ENST00000278833 ANXA1P04083 346 aa30.31■■■□□ 2.44
ROM1-201ENST00000278833 PROSER3Q2NL68 480 aa30.31■■■□□ 2.44
ROM1-201ENST00000278833 GPATCH3Q96I76 525 aa30.31■■■□□ 2.44
ROM1-201ENST00000278833 ZSCAN23Q3MJ62 389 aa30.31■■■□□ 2.44
ROM1-201ENST00000278833 C9orf78Q9NZ63 289 aaPredicted RBP30.31■■■□□ 2.44
ROM1-201ENST00000278833 FNBP4Q8N3X1 1017 aaPredicted RBP30.3■■■□□ 2.44
ROM1-201ENST00000278833 KCNB2Q92953 911 aa30.3■■■□□ 2.44
ROM1-201ENST00000278833 TTC14Q96N46 770 aa30.3■■■□□ 2.44
ROM1-201ENST00000278833 ECHDC1Q9NTX5 307 aa30.3■■■□□ 2.44
ROM1-201ENST00000278833 AFF2P51816 1311 aa30.3■■■□□ 2.44
ROM1-201ENST00000278833 RUFY2Q8WXA3 655 aa30.29■■■□□ 2.44
ROM1-201ENST00000278833 GRM8O00222 908 aa30.29■■■□□ 2.44
ROM1-201ENST00000278833 LAMB4A4D0S4 1761 aa30.28■■■□□ 2.44
ROM1-201ENST00000278833 PDIA6Q15084 440 aa30.28■■■□□ 2.44
ROM1-201ENST00000278833 GPT2Q8TD30 523 aa30.28■■■□□ 2.44
ROM1-201ENST00000278833 SNX14Q9Y5W7 946 aa30.28■■■□□ 2.44
ROM1-201ENST00000278833 COL15A1P39059 1388 aa30.28■■■□□ 2.44
ROM1-201ENST00000278833 NASPP49321 788 aaPredicted RBP30.27■■■□□ 2.44
ROM1-201ENST00000278833 CAVIN1Q6NZI2 390 aaKnown RBP30.27■■■□□ 2.44
ROM1-201ENST00000278833 RGS17Q9UGC6 210 aaPredicted RBP30.27■■■□□ 2.44
ROM1-201ENST00000278833 SLIT2O94813 1529 aa30.26■■■□□ 2.44
ROM1-201ENST00000278833 PRPF40AO75400 957 aaKnown RBP30.26■■■□□ 2.43
ROM1-201ENST00000278833 OS9Q13438 667 aaPredicted RBP30.26■■■□□ 2.43
ROM1-201ENST00000278833 SNRKQ9NRH2 765 aa30.26■■■□□ 2.43
ROM1-201ENST00000278833 COL14A1Q05707 1796 aaKnown RBP30.25■■■□□ 2.43
ROM1-201ENST00000278833 SLC52A2Q9HAB3 445 aa30.25■■■□□ 2.43
ROM1-201ENST00000278833 BTG4Q9NY30 223 aa30.25■■■□□ 2.43
ROM1-201ENST00000278833 KIAA1211Q6ZU35 1233 aa30.25■■■□□ 2.43
ROM1-201ENST00000278833 MEGF6O75095 1541 aa30.24■■■□□ 2.43
ROM1-201ENST00000278833 ZNF790Q6PG37 636 aa30.24■■■□□ 2.43
ROM1-201ENST00000278833 EVI5LQ96CN4 794 aa30.24■■■□□ 2.43
ROM1-201ENST00000278833 KAZALD1Q96I82 304 aa30.24■■■□□ 2.43
ROM1-201ENST00000278833 UPF3BQ9BZI7 483 aaKnown RBP30.24■■■□□ 2.43
ROM1-201ENST00000278833 TM6SF1Q9BZW5 370 aa30.24■■■□□ 2.43
ROM1-201ENST00000278833 USP21Q9UK80 565 aa30.24■■■□□ 2.43
ROM1-201ENST00000278833 GLI3P10071 1580 aa30.24■■■□□ 2.43
ROM1-201ENST00000278833 WDR33Q9C0J8 1336 aaKnown RBP30.24■■■□□ 2.43
ROM1-201ENST00000278833 LARP1Q6PKG0 1096 aaKnown RBP30.23■■■□□ 2.43
ROM1-201ENST00000278833 BCL9LQ86UU0 1499 aa30.23■■■□□ 2.43
ROM1-201ENST00000278833 PLCH1Q4KWH8 1693 aa30.23■■■□□ 2.43
ROM1-201ENST00000278833 HIP1O00291 1037 aa30.23■■■□□ 2.43
ROM1-201ENST00000278833 RAPGEF4Q8WZA2 1011 aa30.23■■■□□ 2.43
ROM1-201ENST00000278833 PHKG2P15735 406 aa30.22■■■□□ 2.43
ROM1-201ENST00000278833 SUCLG2Q96I99 432 aa30.22■■■□□ 2.43
ROM1-201ENST00000278833 SPG7Q9UQ90 795 aa30.22■■■□□ 2.43
ROM1-201ENST00000278833 ESPNB1AK53 854 aa30.21■■■□□ 2.43
ROM1-201ENST00000278833 MAP4K4O95819 1239 aaPredicted RBP30.21■■■□□ 2.43
ROM1-201ENST00000278833 CWF19L2Q2TBE0 894 aaKnown RBP30.21■■■□□ 2.43
ROM1-201ENST00000278833 TMEM87AQ8NBN3 555 aa30.21■■■□□ 2.43
ROM1-201ENST00000278833 DIAPH3Q9NSV4 1193 aa30.21■■■□□ 2.43
ROM1-201ENST00000278833 PRAMEF22A3QJZ6 481 aa30.21■■■□□ 2.43
ROM1-201ENST00000278833 IFIT2P09913 472 aaKnown RBP30.21■■■□□ 2.43
ROM1-201ENST00000278833 TATP17735 454 aaPredicted RBP30.21■■■□□ 2.43
ROM1-201ENST00000278833 RPAP1Q9BWH6 1393 aaPredicted RBP30.2■■■□□ 2.43
ROM1-201ENST00000278833 ANP32BQ92688 251 aaKnown RBP30.2■■■□□ 2.42
ROM1-201ENST00000278833 TRIM44Q96DX7 344 aaPredicted RBP30.2■■■□□ 2.42
ROM1-201ENST00000278833 ARFGEF2Q9Y6D5 1785 aa30.19■■■□□ 2.42
ROM1-201ENST00000278833 NWD2Q9ULI1 1742 aa30.19■■■□□ 2.42
ROM1-201ENST00000278833 ZNF772Q68DY9 489 aaPredicted RBP30.19■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms