RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 ZNF827Q17R98 1081 aa15.84■□□□□ 0.13
C9orf3-201ENST00000277198 TSPYL4Q9UJ04 414 aa15.84■□□□□ 0.13
C9orf3-201ENST00000277198 NKX1-1Q15270 411 aaPredicted RBP15.83■□□□□ 0.12
C9orf3-201ENST00000277198 MTHFSDQ2M296 383 aaKnown RBP15.83■□□□□ 0.12
C9orf3-201ENST00000277198 RBM42Q9BTD8 480 aaKnown RBP15.83■□□□□ 0.12
C9orf3-201ENST00000277198 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.83■□□□□ 0.128e-7■■■■■ 31.5
C9orf3-201ENST00000277198 PAPPAQ13219 1627 aa15.82■□□□□ 0.12
C9orf3-201ENST00000277198 ST18O60284 1047 aa15.82■□□□□ 0.12
C9orf3-201ENST00000277198 C16orf71Q8IYS4 520 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-201ENST00000277198 PIGBQ92521 554 aa15.82■□□□□ 0.12
C9orf3-201ENST00000277198 ZNF530Q6P9A1 599 aaPredicted RBP15.82■□□□□ 0.12
C9orf3-201ENST00000277198 IFNL2Q8IZJ0 200 aa15.82■□□□□ 0.12
C9orf3-201ENST00000277198 GNAI2P04899 355 aa15.81■□□□□ 0.12
C9orf3-201ENST00000277198 STK31Q9BXU1 1019 aa15.81■□□□□ 0.12
C9orf3-201ENST00000277198 KDM6AO15550 1401 aaPredicted RBP15.81■□□□□ 0.12
C9orf3-201ENST00000277198 ERC2O15083 957 aa15.8■□□□□ 0.12
C9orf3-201ENST00000277198 GNAI3P08754 354 aa15.8■□□□□ 0.12
C9orf3-201ENST00000277198 ITGB4P16144 1822 aa15.8■□□□□ 0.12
C9orf3-201ENST00000277198 KLHL40Q2TBA0 621 aa15.8■□□□□ 0.12
C9orf3-201ENST00000277198 SLC15A2Q16348 729 aa15.8■□□□□ 0.12
C9orf3-201ENST00000277198 PLEKHO1Q53GL0 409 aaPredicted RBP15.8■□□□□ 0.12
C9orf3-201ENST00000277198 CCDC30Q5VVM6 783 aa15.8■□□□□ 0.12
C9orf3-201ENST00000277198 CYP2E1P05181 493 aaPredicted RBP15.79■□□□□ 0.12
C9orf3-201ENST00000277198 STK32BQ9NY57 414 aa15.79■□□□□ 0.12
C9orf3-201ENST00000277198 PALLDQ8WX93 1383 aa15.79■□□□□ 0.12
C9orf3-201ENST00000277198 LY75O60449 1722 aa15.78■□□□□ 0.12
C9orf3-201ENST00000277198 BAG4O95429 457 aaKnown RBP15.78■□□□□ 0.12
C9orf3-201ENST00000277198 CLCN1P35523 988 aa15.78■□□□□ 0.12
C9orf3-201ENST00000277198 PDE1AP54750 535 aa15.78■□□□□ 0.12
C9orf3-201ENST00000277198 OTUD7AQ8TE49 926 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-201ENST00000277198 PANK2Q9BZ23 570 aa15.78■□□□□ 0.12
C9orf3-201ENST00000277198 RRAGDQ9NQL2 400 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-201ENST00000277198 CCNL1Q9UK58 526 aaPredicted RBP15.78■□□□□ 0.12
C9orf3-201ENST00000277198 ASAP1Q9ULH1 1129 aa15.78■□□□□ 0.12
C9orf3-201ENST00000277198 ZBTB7AO95365 584 aa15.78■□□□□ 0.12
C9orf3-201ENST00000277198 SSFA2P28290 1259 aa15.78■□□□□ 0.12
C9orf3-201ENST00000277198 EPB41L2O43491 1005 aaKnown RBP15.77■□□□□ 0.12
C9orf3-201ENST00000277198 MCM2P49736 904 aa15.77■□□□□ 0.12
C9orf3-201ENST00000277198 SRCIN1Q9C0H9 1055 aa15.77■□□□□ 0.12
C9orf3-201ENST00000277198 CASZ1Q86V15 1759 aa15.77■□□□□ 0.12
C9orf3-201ENST00000277198 LRP5O75197 1615 aa15.77■□□□□ 0.11
C9orf3-201ENST00000277198 GNAT3A8MTJ3 354 aa15.76■□□□□ 0.11
C9orf3-201ENST00000277198 SMARCA5O60264 1052 aaPredicted RBP15.76■□□□□ 0.11
C9orf3-201ENST00000277198 AMOTQ4VCS5 1084 aa15.76■□□□□ 0.11
C9orf3-201ENST00000277198 SLC27A3Q5K4L6 730 aa15.76■□□□□ 0.11
C9orf3-201ENST00000277198 AKT1S1Q96B36 256 aa15.76■□□□□ 0.11
C9orf3-201ENST00000277198 TMOD3Q9NYL9 352 aa15.76■□□□□ 0.11
C9orf3-201ENST00000277198 SALL3Q9BXA9 1300 aa15.76■□□□□ 0.11
C9orf3-201ENST00000277198 PXDNLA1KZ92 1463 aa15.76■□□□□ 0.11
C9orf3-201ENST00000277198 ATP8B2P98198 1209 aa15.76■□□□□ 0.11
C9orf3-201ENST00000277198 SLC4A10Q6U841 1118 aa15.76■□□□□ 0.11
C9orf3-201ENST00000277198 G2E3Q7L622 706 aa15.76■□□□□ 0.11
C9orf3-201ENST00000277198 CHMP4AQ9BY43 222 aa15.76■□□□□ 0.11
C9orf3-201ENST00000277198 ANAPC15P60006 121 aa15.75■□□□□ 0.11
C9orf3-201ENST00000277198 FLIIQ13045 1269 aa15.75■□□□□ 0.11
C9orf3-201ENST00000277198 SMIM5Q71RC9 77 aa15.75■□□□□ 0.11
C9orf3-201ENST00000277198 IL17RAQ96F46 866 aa15.75■□□□□ 0.11
C9orf3-201ENST00000277198 LRRCC1Q9C099 1032 aa15.75■□□□□ 0.11
C9orf3-201ENST00000277198 FOXD4L1Q9NU39 408 aa15.75■□□□□ 0.11
C9orf3-201ENST00000277198 MIS18AQ9NYP9 233 aa15.75■□□□□ 0.11
C9orf3-201ENST00000277198 PLEKHG2Q9H7P9 1386 aa15.75■□□□□ 0.11
C9orf3-201ENST00000277198 AOX1Q06278 1338 aa15.75■□□□□ 0.11
C9orf3-201ENST00000277198 DCAF5Q96JK2 942 aa15.75■□□□□ 0.11
C9orf3-201ENST00000277198 ATG3Q9NT62 314 aa15.75■□□□□ 0.11
C9orf3-201ENST00000277198 F6X3S4 739 aa15.74■□□□□ 0.11
C9orf3-201ENST00000277198 C1orf141Q5JVX7 400 aa15.74■□□□□ 0.11
C9orf3-201ENST00000277198 AMIGO3Q86WK7 504 aa15.74■□□□□ 0.11
C9orf3-201ENST00000277198 LGR6Q9HBX8 967 aa15.74■□□□□ 0.11
C9orf3-201ENST00000277198 STAP2Q9UGK3 403 aa15.74■□□□□ 0.11
C9orf3-201ENST00000277198 DDX49Q9Y6V7 483 aaKnown RBP15.74■□□□□ 0.11
C9orf3-201ENST00000277198 ATF5Q9Y2D1 282 aaPredicted RBP15.73■□□□□ 0.11
C9orf3-201ENST00000277198 MCCP23508 829 aa15.73■□□□□ 0.11
C9orf3-201ENST00000277198 ZNF445P59923 1031 aa15.73■□□□□ 0.11
C9orf3-201ENST00000277198 GAS2L3Q86XJ1 694 aa15.73■□□□□ 0.11
C9orf3-201ENST00000277198 ARXQ96QS3 562 aa15.73■□□□□ 0.11
C9orf3-201ENST00000277198 MAP3K5Q99683 1374 aa15.73■□□□□ 0.11
C9orf3-201ENST00000277198 PNPLA7Q6ZV29 1317 aa15.72■□□□□ 0.11
C9orf3-201ENST00000277198 TUBGCP6Q96RT7 1819 aa15.72■□□□□ 0.11
C9orf3-201ENST00000277198 MX1P20591 662 aa15.72■□□□□ 0.11
C9orf3-201ENST00000277198 FKBP5Q13451 457 aaPredicted RBP15.72■□□□□ 0.11
C9orf3-201ENST00000277198 ITPK1Q13572 414 aa15.72■□□□□ 0.11
C9orf3-201ENST00000277198 TAF7Q15545 349 aaPredicted RBP15.72■□□□□ 0.11
C9orf3-201ENST00000277198 SLC4A9Q96Q91 983 aa15.72■□□□□ 0.11
C9orf3-201ENST00000277198 LOC102724428A0A0B4J2F2 783 aa15.71■□□□□ 0.11
C9orf3-201ENST00000277198 ERVV-2B6SEH9 535 aa15.71■□□□□ 0.11
C9orf3-201ENST00000277198 APBB1O00213 710 aa15.71■□□□□ 0.11
C9orf3-201ENST00000277198 SIK1P57059 783 aa15.71■□□□□ 0.11
C9orf3-201ENST00000277198 CABP4P57796 275 aa15.71■□□□□ 0.11
C9orf3-201ENST00000277198 NFATC2IPQ8NCF5 419 aa15.71■□□□□ 0.11
C9orf3-201ENST00000277198 CCDC173Q0VFZ6 552 aa15.71■□□□□ 0.1
C9orf3-201ENST00000277198 AKAP4Q5JQC9 854 aa15.71■□□□□ 0.1
C9orf3-201ENST00000277198 LINC00116Q8NCU8 138 aa15.71■□□□□ 0.1
C9orf3-201ENST00000277198 TRIM44Q96DX7 344 aaPredicted RBP15.71■□□□□ 0.1
C9orf3-201ENST00000277198 ESYT1Q9BSJ8 1104 aa15.71■□□□□ 0.1
C9orf3-201ENST00000277198 TFCP2L1Q9NZI6 479 aa15.71■□□□□ 0.1
C9orf3-201ENST00000277198 C5P01031 1676 aa15.7■□□□□ 0.1
C9orf3-201ENST00000277198 PTGER2P43116 358 aa15.7■□□□□ 0.1
C9orf3-201ENST00000277198 ANP32BQ92688 251 aaKnown RBP15.7■□□□□ 0.1
C9orf3-201ENST00000277198 SMARCC1Q92922 1105 aaPredicted RBP15.7■□□□□ 0.1
C9orf3-201ENST00000277198 SPON1Q9HCB6 807 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 416.8 ms