RNA–Protein interactions for RNA: ENST00000275015.9

NFKBIE-201, Transcript of NFKB inhibitor epsilon, humanhuman

TSL 1 (best) BASIC

Gene NFKBIE, Length 2,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIE-201ENST00000275015 GADD45BO75293 160 aaPredicted RBP28.46■■■□□ 2.15
NFKBIE-201ENST00000275015 ZC3H6P61129 1189 aaKnown RBP28.46■■■□□ 2.15
NFKBIE-201ENST00000275015 PTH1RQ03431 593 aa28.46■■■□□ 2.15
NFKBIE-201ENST00000275015 SLC39A6Q13433 755 aa28.46■■■□□ 2.15
NFKBIE-201ENST00000275015 MBD3O95983 291 aa28.45■■■□□ 2.15
NFKBIE-201ENST00000275015 RUFY3Q7L099 469 aa28.45■■■□□ 2.15
NFKBIE-201ENST00000275015 AACSQ86V21 672 aa28.45■■■□□ 2.15
NFKBIE-201ENST00000275015 USP42Q9H9J4 1324 aaKnown RBP28.45■■■□□ 2.14
NFKBIE-201ENST00000275015 KAZALD1Q96I82 304 aa28.45■■■□□ 2.14
NFKBIE-201ENST00000275015 SUCLG2Q96I99 432 aa28.45■■■□□ 2.14
NFKBIE-201ENST00000275015 LMO7Q8WWI1 1683 aa28.44■■■□□ 2.14
NFKBIE-201ENST00000275015 CASTP20810 708 aaKnown RBP28.44■■■□□ 2.14
NFKBIE-201ENST00000275015 TPRNQ4KMQ1 711 aa28.44■■■□□ 2.14
NFKBIE-201ENST00000275015 RNF214Q8ND24 703 aa28.44■■■□□ 2.14
NFKBIE-201ENST00000275015 HEG1Q9ULI3 1381 aa28.43■■■□□ 2.14
NFKBIE-201ENST00000275015 DDX54Q8TDD1 881 aaKnown RBP28.43■■■□□ 2.14
NFKBIE-201ENST00000275015 BICC1Q9H694 974 aaKnown RBP28.43■■■□□ 2.14
NFKBIE-201ENST00000275015 HYPKQ9NX55 129 aa28.43■■■□□ 2.14
NFKBIE-201ENST00000275015 GRM8O00222 908 aa28.43■■■□□ 2.14
NFKBIE-201ENST00000275015 WDR33Q9C0J8 1336 aaKnown RBP28.43■■■□□ 2.14
NFKBIE-201ENST00000275015 KRT28Q7Z3Y7 464 aa28.42■■■□□ 2.14
NFKBIE-201ENST00000275015 ADCK5Q3MIX3 580 aa28.42■■■□□ 2.14
NFKBIE-201ENST00000275015 PRPF40BQ6NWY9 871 aaKnown RBP28.42■■■□□ 2.14
NFKBIE-201ENST00000275015 USP48Q86UV5 1035 aa28.42■■■□□ 2.14
NFKBIE-201ENST00000275015 LINS1Q8NG48 757 aa28.42■■■□□ 2.14
NFKBIE-201ENST00000275015 SIL1Q9H173 461 aa28.42■■■□□ 2.14
NFKBIE-201ENST00000275015 CCDC8Q9H0W5 538 aaPredicted RBP28.41■■■□□ 2.14
NFKBIE-201ENST00000275015 LIMCH1Q9UPQ0 1083 aa28.41■■■□□ 2.14
NFKBIE-201ENST00000275015 RPAP1Q9BWH6 1393 aaPredicted RBP28.41■■■□□ 2.14
NFKBIE-201ENST00000275015 MYL6BP14649 208 aa28.41■■■□□ 2.14
NFKBIE-201ENST00000275015 PDIA6Q15084 440 aa28.41■■■□□ 2.14
NFKBIE-201ENST00000275015 ZSCAN30Q86W11 494 aa28.41■■■□□ 2.14
NFKBIE-201ENST00000275015 SASH1O94885 1247 aa28.4■■■□□ 2.14
NFKBIE-201ENST00000275015 LARGE1O95461 756 aa28.4■■■□□ 2.14
NFKBIE-201ENST00000275015 KLHDC4Q8TBB5 520 aa28.4■■■□□ 2.14
NFKBIE-201ENST00000275015 NCAPD2Q15021 1401 aa28.4■■■□□ 2.14
NFKBIE-201ENST00000275015 EAF2Q96CJ1 260 aaPredicted RBP28.4■■■□□ 2.14
NFKBIE-201ENST00000275015 DDX21Q9NR30 783 aaKnown RBP eCLIP28.39■■■□□ 2.14
NFKBIE-201ENST00000275015 ERC1Q8IUD2 1116 aa28.39■■■□□ 2.13
NFKBIE-201ENST00000275015 GPATCH3Q96I76 525 aa28.39■■■□□ 2.13
NFKBIE-201ENST00000275015 JAKMIP1Q96N16 626 aaKnown RBP28.39■■■□□ 2.13
NFKBIE-201ENST00000275015 RUFY2Q8WXA3 655 aa28.38■■■□□ 2.13
NFKBIE-201ENST00000275015 TLR7Q9NYK1 1049 aaKnown RBP28.38■■■□□ 2.13
NFKBIE-201ENST00000275015 IGKV5-2P06315 115 aa28.38■■■□□ 2.13
NFKBIE-201ENST00000275015 RIC3Q7Z5B4 369 aa28.38■■■□□ 2.13
NFKBIE-201ENST00000275015 PRKCSHP14314 528 aaPredicted RBP28.37■■■□□ 2.13
NFKBIE-201ENST00000275015 FAM227BQ96M60 508 aa28.37■■■□□ 2.13
NFKBIE-201ENST00000275015 DDX58O95786 925 aaKnown RBP28.37■■■□□ 2.13
NFKBIE-201ENST00000275015 SYT1P21579 422 aa28.37■■■□□ 2.13
NFKBIE-201ENST00000275015 G3BP1Q13283 466 aaKnown RBP eCLIP28.37■■■□□ 2.13
NFKBIE-201ENST00000275015 ZNF790Q6PG37 636 aa28.37■■■□□ 2.13
NFKBIE-201ENST00000275015 NLRP2Q9NX02 1062 aa28.37■■■□□ 2.13
NFKBIE-201ENST00000275015 ERBB3P21860 1342 aa28.36■■■□□ 2.13
NFKBIE-201ENST00000275015 NFATC2IPQ8NCF5 419 aa28.36■■■□□ 2.13
NFKBIE-201ENST00000275015 PDLIM2Q96JY6 352 aa28.36■■■□□ 2.13
NFKBIE-201ENST00000275015 CNPY2Q9Y2B0 182 aa28.36■■■□□ 2.13
NFKBIE-201ENST00000275015 PIP4K2AP48426 406 aaPredicted RBP28.36■■■□□ 2.13
NFKBIE-201ENST00000275015 EVI5LQ96CN4 794 aa28.36■■■□□ 2.13
NFKBIE-201ENST00000275015 PHRF1Q9P1Y6 1649 aaKnown RBP28.36■■■□□ 2.13
NFKBIE-201ENST00000275015 CCDC83Q8IWF9 413 aa28.35■■■□□ 2.13
NFKBIE-201ENST00000275015 JARID2Q92833 1246 aaPredicted RBP28.35■■■□□ 2.13
NFKBIE-201ENST00000275015 SMC3Q9UQE7 1217 aa28.35■■■□□ 2.13
NFKBIE-201ENST00000275015 STX6O43752 255 aa28.34■■■□□ 2.13
NFKBIE-201ENST00000275015 PROSER2Q86WR7 435 aaPredicted RBP28.34■■■□□ 2.13
NFKBIE-201ENST00000275015 DDX17Q92841 729 aaKnown RBP28.34■■■□□ 2.13
NFKBIE-201ENST00000275015 HDAC5Q9UQL6 1122 aa28.34■■■□□ 2.13
NFKBIE-201ENST00000275015 SLIT3O75094 1523 aa28.34■■■□□ 2.13
NFKBIE-201ENST00000275015 ZSCAN22P10073 491 aaPredicted RBP28.34■■■□□ 2.13
NFKBIE-201ENST00000275015 MSNP26038 577 aaKnown RBP28.34■■■□□ 2.13
NFKBIE-201ENST00000275015 COL9A3Q14050 684 aaPredicted RBP28.34■■■□□ 2.13
NFKBIE-201ENST00000275015 RAPGEF4Q8WZA2 1011 aa28.34■■■□□ 2.13
NFKBIE-201ENST00000275015 BOLA2Q9H3K6 86 aa28.34■■■□□ 2.13
NFKBIE-201ENST00000275015 PDRG1Q9NUG6 133 aa28.34■■■□□ 2.13
NFKBIE-201ENST00000275015 NPHP4O75161 1426 aaPredicted RBP28.34■■■□□ 2.13
NFKBIE-201ENST00000275015 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.33■■■□□ 2.13
NFKBIE-201ENST00000275015 OVOS2A0A0G2JMS6 1433 aa28.32■■■□□ 2.12
NFKBIE-201ENST00000275015 XAGE3Q8WTP9 111 aa28.32■■■□□ 2.12
NFKBIE-201ENST00000275015 TCHHQ07283 1943 aa28.32■■■□□ 2.12
NFKBIE-201ENST00000275015 NMIQ13287 307 aaPredicted RBP28.32■■■□□ 2.12
NFKBIE-201ENST00000275015 COPS6Q7L5N1 327 aa28.32■■■□□ 2.12
NFKBIE-201ENST00000275015 UTYO14607 1347 aa28.32■■■□□ 2.12
NFKBIE-201ENST00000275015 KCNJ4P48050 445 aa28.31■■■□□ 2.12
NFKBIE-201ENST00000275015 EPHA10Q5JZY3 1008 aa28.31■■■□□ 2.12
NFKBIE-201ENST00000275015 CCDC171Q6TFL3 1326 aa28.31■■■□□ 2.12
NFKBIE-201ENST00000275015 NECTIN1Q15223 517 aa28.31■■■□□ 2.12
NFKBIE-201ENST00000275015 SLC52A2Q9HAB3 445 aa28.31■■■□□ 2.12
NFKBIE-201ENST00000275015 RBM8AQ9Y5S9 174 aaKnown RBP28.31■■■□□ 2.12
NFKBIE-201ENST00000275015 SYAP1Q96A49 352 aaPredicted RBP28.3■■■□□ 2.12
NFKBIE-201ENST00000275015 MYD88Q99836 296 aa28.3■■■□□ 2.12
NFKBIE-201ENST00000275015 TSPY26PQ9H489 355 aa28.3■■■□□ 2.12
NFKBIE-201ENST00000275015 CYP46A1Q9Y6A2 500 aa28.3■■■□□ 2.12
NFKBIE-201ENST00000275015 ZNF496Q96IT1 587 aaPredicted RBP28.3■■■□□ 2.12
NFKBIE-201ENST00000275015 ZSWIM6Q9HCJ5 1215 aa28.3■■■□□ 2.12
NFKBIE-201ENST00000275015 CRYBG1Q9Y4K1 1723 aa28.29■■■□□ 2.12
NFKBIE-201ENST00000275015 NEURL1BA8MQ27 555 aa28.29■■■□□ 2.12
NFKBIE-201ENST00000275015 VPS53Q5VIR6 699 aa28.29■■■□□ 2.12
NFKBIE-201ENST00000275015 NPHP3Q7Z494 1330 aa28.29■■■□□ 2.12
NFKBIE-201ENST00000275015 GJB2P29033 226 aa28.29■■■□□ 2.12
NFKBIE-201ENST00000275015 LARP1Q6PKG0 1096 aaKnown RBP28.29■■■□□ 2.12
NFKBIE-201ENST00000275015 NECAB1Q8N987 351 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 136.2 ms