RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 APPP05067 770 aa18.74■□□□□ 0.59
CTDSP1-201ENST00000273062 MX1P20591 662 aa18.74■□□□□ 0.59
CTDSP1-201ENST00000273062 OTUD7AQ8TE49 926 aaPredicted RBP18.74■□□□□ 0.59
CTDSP1-201ENST00000273062 USP31Q70CQ4 1352 aa18.74■□□□□ 0.59
CTDSP1-201ENST00000273062 NALCNQ8IZF0 1738 aa18.74■□□□□ 0.59
CTDSP1-201ENST00000273062 MCM10Q7L590 875 aa18.74■□□□□ 0.59
CTDSP1-201ENST00000273062 GCC1Q96CN9 775 aa18.74■□□□□ 0.59
CTDSP1-201ENST00000273062 TOMM22Q9NS69 142 aa18.74■□□□□ 0.59
CTDSP1-201ENST00000273062 NEK4P51957 841 aa18.73■□□□□ 0.59
CTDSP1-201ENST00000273062 GNAI1P63096 354 aa18.73■□□□□ 0.59
CTDSP1-201ENST00000273062 CNPY2Q9Y2B0 182 aa18.73■□□□□ 0.59
CTDSP1-201ENST00000273062 KRT24Q2M2I5 525 aa18.73■□□□□ 0.59
CTDSP1-201ENST00000273062 USP27XA6NNY8 438 aa18.72■□□□□ 0.59
CTDSP1-201ENST00000273062 ALDH1L2Q3SY69 923 aa18.72■□□□□ 0.59
CTDSP1-201ENST00000273062 PAXBP1Q9Y5B6 917 aa18.72■□□□□ 0.59
CTDSP1-201ENST00000273062 MYO1CO00159 1063 aa18.72■□□□□ 0.59
CTDSP1-201ENST00000273062 REC8O95072 547 aa18.72■□□□□ 0.59
CTDSP1-201ENST00000273062 CFAP44Q96MT7 982 aa18.72■□□□□ 0.59
CTDSP1-201ENST00000273062 TPD52L1Q16890 204 aaPredicted RBP18.71■□□□□ 0.59
CTDSP1-201ENST00000273062 KRBA2Q6ZNG9 492 aa18.71■□□□□ 0.59
CTDSP1-201ENST00000273062 MRPL50Q8N5N7 158 aaKnown RBP18.71■□□□□ 0.59
CTDSP1-201ENST00000273062 EXOC6BQ9Y2D4 811 aa18.71■□□□□ 0.59
CTDSP1-201ENST00000273062 FHOD1Q9Y613 1164 aa18.71■□□□□ 0.59
CTDSP1-201ENST00000273062 FOXO3O43524 673 aa18.71■□□□□ 0.59
CTDSP1-201ENST00000273062 TPM3P06753 285 aa18.71■□□□□ 0.59
CTDSP1-201ENST00000273062 TWISTNBQ3B726 338 aaPredicted RBP18.71■□□□□ 0.59
CTDSP1-201ENST00000273062 CEP135Q66GS9 1140 aa18.71■□□□□ 0.59
CTDSP1-201ENST00000273062 GOLGA6L6A8MZA4 724 aa18.7■□□□□ 0.58
CTDSP1-201ENST00000273062 ZBTB7BO15156 539 aaPredicted RBP18.7■□□□□ 0.58
CTDSP1-201ENST00000273062 ST5P78524 1137 aa18.7■□□□□ 0.58
CTDSP1-201ENST00000273062 TTC22Q5TAA0 569 aa18.7■□□□□ 0.58
CTDSP1-201ENST00000273062 PIK3C2AO00443 1686 aa18.7■□□□□ 0.58
CTDSP1-201ENST00000273062 DNAJC5Q9H3Z4 198 aa18.7■□□□□ 0.58
CTDSP1-201ENST00000273062 TTC21AQ8NDW8 1320 aa18.7■□□□□ 0.58
CTDSP1-201ENST00000273062 POLR3GO15318 223 aaPredicted RBP18.7■□□□□ 0.58
CTDSP1-201ENST00000273062 NLRP6P59044 892 aa18.7■□□□□ 0.58
CTDSP1-201ENST00000273062 ICE2Q659A1 982 aa18.7■□□□□ 0.58
CTDSP1-201ENST00000273062 IPO8O15397 1037 aaKnown RBP18.69■□□□□ 0.58
CTDSP1-201ENST00000273062 PLA2G4AP47712 749 aa18.69■□□□□ 0.58
CTDSP1-201ENST00000273062 CT47A1Q5JQC4 288 aaPredicted RBP18.69■□□□□ 0.58
CTDSP1-201ENST00000273062 ZSCAN25Q6NSZ9 544 aa18.69■□□□□ 0.58
CTDSP1-201ENST00000273062 CNPY4Q8N129 248 aa18.69■□□□□ 0.58
CTDSP1-201ENST00000273062 LMOD3Q0VAK6 560 aa18.69■□□□□ 0.58
CTDSP1-201ENST00000273062 INTS3Q68E01 1043 aaKnown RBP18.69■□□□□ 0.58
CTDSP1-201ENST00000273062 LRRN4CLQ8ND94 238 aa18.69■□□□□ 0.58
CTDSP1-201ENST00000273062 SRCIN1Q9C0H9 1055 aa18.69■□□□□ 0.58
CTDSP1-201ENST00000273062 ATG3Q9NT62 314 aa18.69■□□□□ 0.58
CTDSP1-201ENST00000273062 PTPRCP08575 1304 aa18.68■□□□□ 0.58
CTDSP1-201ENST00000273062 SDSP20132 328 aa18.68■□□□□ 0.58
CTDSP1-201ENST00000273062 TCHHQ07283 1943 aa18.68■□□□□ 0.58
CTDSP1-201ENST00000273062 CASQ1P31415 396 aa18.68■□□□□ 0.58
CTDSP1-201ENST00000273062 FAM193AP78312 1265 aa18.68■□□□□ 0.58
CTDSP1-201ENST00000273062 TSGA10IPQ3SY00 556 aa18.68■□□□□ 0.58
CTDSP1-201ENST00000273062 CREBRFQ8IUR6 639 aa18.68■□□□□ 0.58
CTDSP1-201ENST00000273062 MIS18AQ9NYP9 233 aa18.68■□□□□ 0.58
CTDSP1-201ENST00000273062 RGPD1P0DJD0 1748 aa18.68■□□□□ 0.58
CTDSP1-201ENST00000273062 AMPHP49418 695 aa18.67■□□□□ 0.58
CTDSP1-201ENST00000273062 LUZP1Q86V48 1076 aa18.67■□□□□ 0.58
CTDSP1-201ENST00000273062 CACTINQ8WUQ7 758 aaKnown RBP18.67■□□□□ 0.58
CTDSP1-201ENST00000273062 SMARCE1Q969G3 411 aa18.67■□□□□ 0.58
CTDSP1-201ENST00000273062 CLGNO14967 610 aa18.66■□□□□ 0.58
CTDSP1-201ENST00000273062 CUL4AQ13619 759 aa18.66■□□□□ 0.58
CTDSP1-201ENST00000273062 MUM1L1Q5H9M0 696 aa18.66■□□□□ 0.58
CTDSP1-201ENST00000273062 C14orf37Q86TY3 774 aa18.66■□□□□ 0.58
CTDSP1-201ENST00000273062 DTNBO60941 627 aa18.66■□□□□ 0.58
CTDSP1-201ENST00000273062 ANKLE2Q86XL3 938 aa18.66■□□□□ 0.58
CTDSP1-201ENST00000273062 GPATCH11Q8N954 259 aa18.66■□□□□ 0.58
CTDSP1-201ENST00000273062 FIBPO43427 364 aa18.65■□□□□ 0.58
CTDSP1-201ENST00000273062 MTHFSDQ2M296 383 aaKnown RBP18.65■□□□□ 0.58
CTDSP1-201ENST00000273062 DRC7Q8IY82 874 aa18.65■□□□□ 0.58
CTDSP1-201ENST00000273062 CCDC191Q8NCU4 936 aa18.65■□□□□ 0.58
CTDSP1-201ENST00000273062 EYA1Q99502 592 aa18.65■□□□□ 0.58
CTDSP1-201ENST00000273062 NCAPGQ9BPX3 1015 aa18.65■□□□□ 0.58
CTDSP1-201ENST00000273062 LRRFIP2Q9Y608 721 aaKnown RBP18.65■□□□□ 0.58
CTDSP1-201ENST00000273062 SBNO1A3KN83 1393 aa18.65■□□□□ 0.58
CTDSP1-201ENST00000273062 FLT4P35916 1363 aa18.65■□□□□ 0.58
CTDSP1-201ENST00000273062 PNMA6AP0CW24 399 aaPredicted RBP18.65■□□□□ 0.58
CTDSP1-201ENST00000273062 MYCBPQ99417 103 aaPredicted RBP18.65■□□□□ 0.58
CTDSP1-201ENST00000273062 PALD1Q9ULE6 856 aa18.65■□□□□ 0.58
CTDSP1-201ENST00000273062 CLCN6P51797 869 aa18.64■□□□□ 0.57
CTDSP1-201ENST00000273062 BRPF1P55201 1214 aaPredicted RBP18.64■□□□□ 0.57
CTDSP1-201ENST00000273062 ARID5BQ14865 1188 aa18.64■□□□□ 0.57
CTDSP1-201ENST00000273062 ERCC6LQ2NKX8 1250 aa18.64■□□□□ 0.57
CTDSP1-201ENST00000273062 CCDC144BQ3MJ40 725 aa18.64■□□□□ 0.57
CTDSP1-201ENST00000273062 CCDC144CPQ8IYA2 1237 aa18.64■□□□□ 0.57
CTDSP1-201ENST00000273062 ABTB2Q8N961 1025 aa18.64■□□□□ 0.57
CTDSP1-201ENST00000273062 ZCCHC17Q9NP64 241 aaKnown RBP18.64■□□□□ 0.57
CTDSP1-201ENST00000273062 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.64■□□□□ 0.57
CTDSP1-201ENST00000273062 FMN2Q9NZ56 1722 aa18.64■□□□□ 0.57
CTDSP1-201ENST00000273062 RPAP1Q9BWH6 1393 aaPredicted RBP18.64■□□□□ 0.57
CTDSP1-201ENST00000273062 BMS1Q14692 1282 aaKnown RBP18.64■□□□□ 0.57
CTDSP1-201ENST00000273062 SART3Q15020 963 aaKnown RBP18.64■□□□□ 0.57
CTDSP1-201ENST00000273062 SLFNL1Q499Z3 407 aa18.63■□□□□ 0.57
CTDSP1-201ENST00000273062 TMEM87AQ8NBN3 555 aa18.63■□□□□ 0.57
CTDSP1-201ENST00000273062 LTV1Q96GA3 475 aaPredicted RBP18.63■□□□□ 0.57
CTDSP1-201ENST00000273062 ERO1AQ96HE7 468 aa18.63■□□□□ 0.57
CTDSP1-201ENST00000273062 ANKARQ7Z5J8 1434 aa18.63■□□□□ 0.57
CTDSP1-201ENST00000273062 PIK3R4Q99570 1358 aa18.63■□□□□ 0.57
CTDSP1-201ENST00000273062 H2AFXP16104 143 aaPredicted RBP18.63■□□□□ 0.57
CTDSP1-201ENST00000273062 ZNF428Q96B54 188 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms