RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 LOC102724428A0A0B4J2F2 783 aa19.23■□□□□ 0.67
COPS3-201ENST00000268717 SIK1P57059 783 aa19.23■□□□□ 0.67
COPS3-201ENST00000268717 SIRT2Q8IXJ6 389 aa19.23■□□□□ 0.67
COPS3-201ENST00000268717 DNAAF4Q8WXU2 420 aa19.23■□□□□ 0.67
COPS3-201ENST00000268717 BACH2Q9BYV9 841 aa19.23■□□□□ 0.67
COPS3-201ENST00000268717 ZNF831Q5JPB2 1677 aa19.23■□□□□ 0.67
COPS3-201ENST00000268717 UBR2Q8IWV8 1755 aa19.22■□□□□ 0.67
COPS3-201ENST00000268717 ZBTB7AO95365 584 aa19.22■□□□□ 0.67
COPS3-201ENST00000268717 PDE4AP27815 886 aa19.22■□□□□ 0.67
COPS3-201ENST00000268717 NUCB1Q02818 461 aa19.22■□□□□ 0.67
COPS3-201ENST00000268717 PDIA6Q15084 440 aa19.22■□□□□ 0.67
COPS3-201ENST00000268717 CEP85Q6P2H3 762 aa19.22■□□□□ 0.67
COPS3-201ENST00000268717 C1orf115Q9H7X2 142 aa19.22■□□□□ 0.67
COPS3-201ENST00000268717 TFCP2L1Q9NZI6 479 aa19.22■□□□□ 0.67
COPS3-201ENST00000268717 PNPLA7Q6ZV29 1317 aa19.22■□□□□ 0.67
COPS3-201ENST00000268717 DDX58O95786 925 aaKnown RBP19.22■□□□□ 0.67
COPS3-201ENST00000268717 RGS3P49796 1198 aa19.22■□□□□ 0.67
COPS3-201ENST00000268717 KCPQ6ZWJ8 1503 aa19.21■□□□□ 0.67
COPS3-201ENST00000268717 LAMB4A4D0S4 1761 aa19.21■□□□□ 0.67
COPS3-201ENST00000268717 ADCY9O60503 1353 aa19.21■□□□□ 0.67
COPS3-201ENST00000268717 GNAI2P04899 355 aa19.21■□□□□ 0.67
COPS3-201ENST00000268717 SRCIN1Q9C0H9 1055 aa19.21■□□□□ 0.67
COPS3-201ENST00000268717 UBR3Q6ZT12 1888 aa19.2■□□□□ 0.66
COPS3-201ENST00000268717 FAM161AQ3B820 660 aa19.2■□□□□ 0.66
COPS3-201ENST00000268717 BEND3Q5T5X7 828 aa19.2■□□□□ 0.66
COPS3-201ENST00000268717 KSR2Q6VAB6 950 aa19.2■□□□□ 0.66
COPS3-201ENST00000268717 MTFR1LQ9H019 292 aa19.2■□□□□ 0.66
COPS3-201ENST00000268717 PI4KAP2A4QPH2 592 aa19.19■□□□□ 0.66
COPS3-201ENST00000268717 HMMRO75330 724 aa19.19■□□□□ 0.66
COPS3-201ENST00000268717 ATP6V1AP38606 617 aa19.19■□□□□ 0.66
COPS3-201ENST00000268717 PI4KAP1Q8N8J0 262 aa19.19■□□□□ 0.66
COPS3-201ENST00000268717 COL5A3P25940 1745 aaPredicted RBP19.18■□□□□ 0.66
COPS3-201ENST00000268717 ALDH1L1O75891 902 aa19.18■□□□□ 0.66
COPS3-201ENST00000268717 ANXA1P04083 346 aa19.18■□□□□ 0.66
COPS3-201ENST00000268717 PROSER3Q2NL68 480 aa19.18■□□□□ 0.66
COPS3-201ENST00000268717 DCTPP1Q9H773 170 aa19.18■□□□□ 0.66
COPS3-201ENST00000268717 ITPK1Q13572 414 aa19.18■□□□□ 0.66
COPS3-201ENST00000268717 CHD1LQ86WJ1 897 aa19.18■□□□□ 0.66
COPS3-201ENST00000268717 LINC00116Q8NCU8 138 aa19.18■□□□□ 0.66
COPS3-201ENST00000268717 SLC4A9Q96Q91 983 aa19.18■□□□□ 0.66
COPS3-201ENST00000268717 ATF5Q9Y2D1 282 aaPredicted RBP19.18■□□□□ 0.66
COPS3-201ENST00000268717 COL24A1Q17RW2 1714 aa19.17■□□□□ 0.66
COPS3-201ENST00000268717 PTGER2P43116 358 aa19.17■□□□□ 0.66
COPS3-201ENST00000268717 LRP10Q7Z4F1 713 aa19.17■□□□□ 0.66
COPS3-201ENST00000268717 VSIG10Q8N0Z9 540 aa19.17■□□□□ 0.66
COPS3-201ENST00000268717 SLC16A10Q8TF71 515 aa19.17■□□□□ 0.66
COPS3-201ENST00000268717 USP44Q9H0E7 712 aa19.17■□□□□ 0.66
COPS3-201ENST00000268717 RBM42Q9BTD8 480 aaKnown RBP19.16■□□□□ 0.66
COPS3-201ENST00000268717 USP16Q9Y5T5 823 aa19.16■□□□□ 0.66
COPS3-201ENST00000268717 AK7Q96M32 723 aa19.15■□□□□ 0.66
COPS3-201ENST00000268717 SGIP1Q9BQI5 828 aa19.15■□□□□ 0.66
COPS3-201ENST00000268717 HDAC5Q9UQL6 1122 aa19.15■□□□□ 0.66
COPS3-201ENST00000268717 CICQ96RK0 1608 aaPredicted RBP19.15■□□□□ 0.66
COPS3-201ENST00000268717 UBTFL1P0CB47 393 aaPredicted RBP19.14■□□□□ 0.66
COPS3-201ENST00000268717 C8orf34Q49A92 452 aa19.14■□□□□ 0.66
COPS3-201ENST00000268717 COL23A1Q86Y22 540 aaPredicted RBP19.14■□□□□ 0.66
COPS3-201ENST00000268717 TEX13AQ9BXU3 409 aaPredicted RBP19.14■□□□□ 0.66
COPS3-201ENST00000268717 PPP1R1BQ9UD71 204 aaPredicted RBP19.14■□□□□ 0.66
COPS3-201ENST00000268717 MAP3K2Q9Y2U5 619 aa19.14■□□□□ 0.66
COPS3-201ENST00000268717 MYH14Q7Z406 1995 aaKnown RBP19.14■□□□□ 0.65
COPS3-201ENST00000268717 PTCD1O75127 700 aaKnown RBP19.14■□□□□ 0.65
COPS3-201ENST00000268717 LINS1Q8NG48 757 aa19.14■□□□□ 0.65
COPS3-201ENST00000268717 TJP1Q07157 1748 aa19.13■□□□□ 0.65
COPS3-201ENST00000268717 FLAD1Q8NFF5 587 aa19.13■□□□□ 0.65
COPS3-201ENST00000268717 ATP8B2P98198 1209 aa19.12■□□□□ 0.65
COPS3-201ENST00000268717 AMIGO3Q86WK7 504 aa19.12■□□□□ 0.65
COPS3-201ENST00000268717 ANKRD45Q5TZF3 282 aa19.11■□□□□ 0.65
COPS3-201ENST00000268717 XAGE3Q8WTP9 111 aa19.11■□□□□ 0.65
COPS3-201ENST00000268717 UTYO14607 1347 aa19.11■□□□□ 0.65
COPS3-201ENST00000268717 MSH5O43196 834 aa19.11■□□□□ 0.65
COPS3-201ENST00000268717 SSFA2P28290 1259 aa19.11■□□□□ 0.65
COPS3-201ENST00000268717 GNPATO15228 680 aa19.1■□□□□ 0.65
COPS3-201ENST00000268717 NEXNQ0ZGT2 675 aa19.1■□□□□ 0.65
COPS3-201ENST00000268717 COPS6Q7L5N1 327 aa19.1■□□□□ 0.65
COPS3-201ENST00000268717 RIC3Q7Z5B4 369 aa19.1■□□□□ 0.65
COPS3-201ENST00000268717 LNPKQ9C0E8 428 aa19.1■□□□□ 0.65
COPS3-201ENST00000268717 LRRFIP2Q9Y608 721 aaKnown RBP19.1■□□□□ 0.65
COPS3-201ENST00000268717 CNTNAP4Q9C0A0 1308 aa19.09■□□□□ 0.65
COPS3-201ENST00000268717 MYL6BP14649 208 aa19.09■□□□□ 0.65
COPS3-201ENST00000268717 RC3H1Q5TC82 1133 aaKnown RBP19.09■□□□□ 0.65
COPS3-201ENST00000268717 ANKRD13DQ6ZTN6 518 aa19.09■□□□□ 0.65
COPS3-201ENST00000268717 METTL22Q9BUU2 404 aaPredicted RBP19.09■□□□□ 0.65
COPS3-201ENST00000268717 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.08■□□□□ 0.65
COPS3-201ENST00000268717 PHF14O94880 888 aa19.08■□□□□ 0.65
COPS3-201ENST00000268717 MTX1Q13505 466 aa19.08■□□□□ 0.65
COPS3-201ENST00000268717 SMIM5Q71RC9 77 aa19.08■□□□□ 0.65
COPS3-201ENST00000268717 AIMP1Q12904 312 aaKnown RBP19.07■□□□□ 0.64
COPS3-201ENST00000268717 PLBD2Q8NHP8 589 aa19.07■□□□□ 0.64
COPS3-201ENST00000268717 SSH3Q8TE77 659 aa19.07■□□□□ 0.64
COPS3-201ENST00000268717 ZBTB47Q9UFB7 747 aaPredicted RBP19.07■□□□□ 0.64
COPS3-201ENST00000268717 POLD1P28340 1107 aa19.07■□□□□ 0.64
COPS3-201ENST00000268717 POLA2Q14181 598 aa19.07■□□□□ 0.64
COPS3-201ENST00000268717 ARXQ96QS3 562 aa19.07■□□□□ 0.64
COPS3-201ENST00000268717 NBPF26B4DH59 902 aa19.06■□□□□ 0.64
COPS3-201ENST00000268717 NBPF7P0C2Y1 421 aaPredicted RBP19.06■□□□□ 0.64
COPS3-201ENST00000268717 PIP4K2AP48426 406 aaPredicted RBP19.06■□□□□ 0.64
COPS3-201ENST00000268717 NBPF10Q6P3W6 841 aaKnown RBP19.06■□□□□ 0.64
COPS3-201ENST00000268717 NBPF15Q8N660 670 aa19.06■□□□□ 0.64
COPS3-201ENST00000268717 RTCBQ9Y3I0 505 aaKnown RBP19.06■□□□□ 0.64
COPS3-201ENST00000268717 COL15A1P39059 1388 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms