RNA–Protein interactions for RNA: ENST00000268383.6

CDR2-201, Transcript of cerebellar degeneration related protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDR2, Length 2,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-201ENST00000268383 MAP3K2Q9Y2U5 619 aa26.65■■□□□ 1.86
CDR2-201ENST00000268383 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP26.65■■□□□ 1.86
CDR2-201ENST00000268383 BABAM1Q9NWV8 329 aa26.65■■□□□ 1.86
CDR2-201ENST00000268383 N4BP2Q86UW6 1770 aaPredicted RBP26.64■■□□□ 1.86
CDR2-201ENST00000268383 FAM13BQ9NYF5 915 aa26.64■■□□□ 1.86
CDR2-201ENST00000268383 C9orf78Q9NZ63 289 aaPredicted RBP26.64■■□□□ 1.86
CDR2-201ENST00000268383 NECAB1Q8N987 351 aa26.64■■□□□ 1.85
CDR2-201ENST00000268383 HYPKQ9NX55 129 aa26.63■■□□□ 1.85
CDR2-201ENST00000268383 IP6K1Q92551 441 aa26.63■■□□□ 1.85
CDR2-201ENST00000268383 GJB2P29033 226 aa26.62■■□□□ 1.85
CDR2-201ENST00000268383 DNM1Q05193 864 aaKnown RBP26.62■■□□□ 1.85
CDR2-201ENST00000268383 UQCRHLA0A096LP55 91 aa26.62■■□□□ 1.85
CDR2-201ENST00000268383 F13A1P00488 732 aa26.62■■□□□ 1.85
CDR2-201ENST00000268383 UQCRHP07919 91 aa26.62■■□□□ 1.85
CDR2-201ENST00000268383 CLASRPQ8N2M8 674 aaKnown RBP26.62■■□□□ 1.85
CDR2-201ENST00000268383 TCEANC2Q96MN5 208 aa26.62■■□□□ 1.85
CDR2-201ENST00000268383 PHF8Q9UPP1 1060 aa26.62■■□□□ 1.85
CDR2-201ENST00000268383 RGPD2P0DJD1 1756 aa26.62■■□□□ 1.85
CDR2-201ENST00000268383 GLRX3O76003 335 aaKnown RBP26.61■■□□□ 1.85
CDR2-201ENST00000268383 C17orf53Q8N3J3 647 aaPredicted RBP26.61■■□□□ 1.85
CDR2-201ENST00000268383 ARID3AQ99856 593 aa26.61■■□□□ 1.85
CDR2-201ENST00000268383 PLCB2Q00722 1185 aa26.61■■□□□ 1.85
CDR2-201ENST00000268383 GIMAP6Q6P9H5 292 aa26.61■■□□□ 1.85
CDR2-201ENST00000268383 FAM227BQ96M60 508 aa26.61■■□□□ 1.85
CDR2-201ENST00000268383 LTN1O94822 1766 aa26.61■■□□□ 1.85
CDR2-201ENST00000268383 AIMP1Q12904 312 aaKnown RBP26.6■■□□□ 1.85
CDR2-201ENST00000268383 ST3GAL1Q11201 340 aa26.6■■□□□ 1.85
CDR2-201ENST00000268383 AACSQ86V21 672 aa26.6■■□□□ 1.85
CDR2-201ENST00000268383 PDRG1Q9NUG6 133 aa26.6■■□□□ 1.85
CDR2-201ENST00000268383 CCDC183Q5T5S1 534 aa26.59■■□□□ 1.85
CDR2-201ENST00000268383 THEMISQ8N1K5 641 aaPredicted RBP26.59■■□□□ 1.85
CDR2-201ENST00000268383 CCDC8Q9H0W5 538 aaPredicted RBP26.59■■□□□ 1.85
CDR2-201ENST00000268383 VPS37CA5D8V6 355 aaPredicted RBP26.59■■□□□ 1.85
CDR2-201ENST00000268383 IFIT2P09913 472 aaKnown RBP26.59■■□□□ 1.85
CDR2-201ENST00000268383 CHMP3Q9Y3E7 222 aa26.59■■□□□ 1.85
CDR2-201ENST00000268383 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.59■■□□□ 1.85
CDR2-201ENST00000268383 PHF14O94880 888 aa26.59■■□□□ 1.85
CDR2-201ENST00000268383 JARID2Q92833 1246 aaPredicted RBP26.59■■□□□ 1.85
CDR2-201ENST00000268383 SIL1Q9H173 461 aa26.59■■□□□ 1.85
CDR2-201ENST00000268383 ECHDC1Q9NTX5 307 aa26.59■■□□□ 1.85
CDR2-201ENST00000268383 KLHDC4Q8TBB5 520 aa26.58■■□□□ 1.85
CDR2-201ENST00000268383 TTC12Q9H892 705 aaPredicted RBP26.58■■□□□ 1.85
CDR2-201ENST00000268383 ARHGAP23Q9P227 1491 aa26.58■■□□□ 1.84
CDR2-201ENST00000268383 GLIPR1L2Q4G1C9 344 aa26.58■■□□□ 1.84
CDR2-201ENST00000268383 FAM173BQ6P4H8 233 aa26.58■■□□□ 1.84
CDR2-201ENST00000268383 TLR7Q9NYK1 1049 aaKnown RBP26.58■■□□□ 1.84
CDR2-201ENST00000268383 ME3Q16798 604 aa26.57■■□□□ 1.84
CDR2-201ENST00000268383 TMEM87AQ8NBN3 555 aa26.57■■□□□ 1.84
CDR2-201ENST00000268383 SLIT1O75093 1534 aa26.57■■□□□ 1.84
CDR2-201ENST00000268383 EPB41L2O43491 1005 aaKnown RBP26.57■■□□□ 1.84
CDR2-201ENST00000268383 TAF6LQ9Y6J9 622 aa26.57■■□□□ 1.84
CDR2-201ENST00000268383 ADCY5O95622 1261 aa26.56■■□□□ 1.84
CDR2-201ENST00000268383 HSP90AB4PQ58FF6 505 aa26.56■■□□□ 1.84
CDR2-201ENST00000268383 ESCO1Q5FWF5 840 aa26.56■■□□□ 1.84
CDR2-201ENST00000268383 FERMT3Q86UX7 667 aa26.56■■□□□ 1.84
CDR2-201ENST00000268383 MTMR6Q9Y217 621 aa26.56■■□□□ 1.84
CDR2-201ENST00000268383 TTC41PQ6P2S7 1318 aa26.56■■□□□ 1.84
CDR2-201ENST00000268383 UBE2HP62256 183 aa26.56■■□□□ 1.84
CDR2-201ENST00000268383 LMOD2Q6P5Q4 547 aa26.56■■□□□ 1.84
CDR2-201ENST00000268383 DBF4Q9UBU7 674 aaPredicted RBP26.56■■□□□ 1.84
CDR2-201ENST00000268383 KCNJ4P48050 445 aa26.55■■□□□ 1.84
CDR2-201ENST00000268383 PSME1Q06323 249 aa26.55■■□□□ 1.84
CDR2-201ENST00000268383 SUCLG2Q96I99 432 aa26.55■■□□□ 1.84
CDR2-201ENST00000268383 PXDNQ92626 1479 aa26.54■■□□□ 1.84
CDR2-201ENST00000268383 EAF2Q96CJ1 260 aaPredicted RBP26.54■■□□□ 1.84
CDR2-201ENST00000268383 RBM8AQ9Y5S9 174 aaKnown RBP26.54■■□□□ 1.84
CDR2-201ENST00000268383 ANKARQ7Z5J8 1434 aa26.54■■□□□ 1.84
CDR2-201ENST00000268383 SASH1O94885 1247 aa26.54■■□□□ 1.84
CDR2-201ENST00000268383 AKAP4Q5JQC9 854 aa26.54■■□□□ 1.84
CDR2-201ENST00000268383 KAZALD1Q96I82 304 aa26.54■■□□□ 1.84
CDR2-201ENST00000268383 CYP46A1Q9Y6A2 500 aa26.54■■□□□ 1.84
CDR2-201ENST00000268383 USP42Q9H9J4 1324 aaKnown RBP26.54■■□□□ 1.84
CDR2-201ENST00000268383 RNMTO43148 476 aaKnown RBP26.53■■□□□ 1.84
CDR2-201ENST00000268383 MCM5P33992 734 aa26.53■■□□□ 1.84
CDR2-201ENST00000268383 NMIQ13287 307 aaPredicted RBP26.53■■□□□ 1.84
CDR2-201ENST00000268383 BOLA2Q9H3K6 86 aa26.53■■□□□ 1.84
CDR2-201ENST00000268383 BICC1Q9H694 974 aaKnown RBP26.53■■□□□ 1.84
CDR2-201ENST00000268383 TPCN1Q9ULQ1 816 aa26.53■■□□□ 1.84
CDR2-201ENST00000268383 GIGYF1O75420 1035 aaPredicted RBP26.53■■□□□ 1.84
CDR2-201ENST00000268383 RUFY2Q8WXA3 655 aa26.52■■□□□ 1.84
CDR2-201ENST00000268383 NECTIN1Q15223 517 aa26.52■■□□□ 1.84
CDR2-201ENST00000268383 PDCL3Q9H2J4 239 aa26.52■■□□□ 1.84
CDR2-201ENST00000268383 ZSWIM6Q9HCJ5 1215 aa26.52■■□□□ 1.84
CDR2-201ENST00000268383 AP5Z1O43299 807 aa26.52■■□□□ 1.84
CDR2-201ENST00000268383 HOXB7P09629 217 aa26.52■■□□□ 1.84
CDR2-201ENST00000268383 KIAA2012Q0VF49 1180 aa26.52■■□□□ 1.84
CDR2-201ENST00000268383 DNTTIP2Q5QJE6 756 aaKnown RBP26.52■■□□□ 1.84
CDR2-201ENST00000268383 KSR2Q6VAB6 950 aa26.52■■□□□ 1.84
CDR2-201ENST00000268383 EDC3Q96F86 508 aaKnown RBP26.52■■□□□ 1.84
CDR2-201ENST00000268383 CCDC171Q6TFL3 1326 aa26.51■■□□□ 1.84
CDR2-201ENST00000268383 KDM3BQ7LBC6 1761 aa26.51■■□□□ 1.83
CDR2-201ENST00000268383 MTX1Q13505 466 aa26.51■■□□□ 1.83
CDR2-201ENST00000268383 VPS53Q5VIR6 699 aa26.51■■□□□ 1.83
CDR2-201ENST00000268383 CREB3L3Q68CJ9 461 aa26.51■■□□□ 1.83
CDR2-201ENST00000268383 CSPP1Q1MSJ5 1256 aa26.51■■□□□ 1.83
CDR2-201ENST00000268383 PLEKHO1Q53GL0 409 aaPredicted RBP26.51■■□□□ 1.83
CDR2-201ENST00000268383 TSC1Q92574 1164 aa26.51■■□□□ 1.83
CDR2-201ENST00000268383 A0A0D9SFI3 127 aa26.5■■□□□ 1.83
CDR2-201ENST00000268383 C1orf141Q5JVX7 400 aa26.5■■□□□ 1.83
CDR2-201ENST00000268383 MED1Q15648 1581 aaPredicted RBP26.5■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms