RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 NUTM1Q86Y26 1132 aa12.8□□□□□ -0.36
CHFR-201ENST00000266880 CCDC63Q8NA47 563 aa12.8□□□□□ -0.36
CHFR-201ENST00000266880 SMARCA5O60264 1052 aaPredicted RBP12.8□□□□□ -0.36
CHFR-201ENST00000266880 ZSCAN23Q3MJ62 389 aa12.8□□□□□ -0.36
CHFR-201ENST00000266880 CABP2Q9NPB3 220 aa12.8□□□□□ -0.36
CHFR-201ENST00000266880 NBPF11Q86T75 865 aa12.8□□□□□ -0.36
CHFR-201ENST00000266880 C8orf76Q96K31 380 aa12.8□□□□□ -0.36
CHFR-201ENST00000266880 GGNBP2Q9H3C7 697 aa12.8□□□□□ -0.36
CHFR-201ENST00000266880 STIM2Q9P246 746 aa12.8□□□□□ -0.36
CHFR-201ENST00000266880 FHOD3Q2V2M9 1422 aa12.8□□□□□ -0.36
CHFR-201ENST00000266880 RPAINQ86UA6 219 aa12.8□□□□□ -0.36
CHFR-201ENST00000266880 MIA2Q96PC5 1412 aa12.8□□□□□ -0.36
CHFR-201ENST00000266880 DNAI1Q9UI46 699 aa12.8□□□□□ -0.36
CHFR-201ENST00000266880 CNNM3Q8NE01 707 aa12.8□□□□□ -0.36
CHFR-201ENST00000266880 CPLX4Q7Z7G2 160 aa12.79□□□□□ -0.36
CHFR-201ENST00000266880 SLC4A2P04920 1241 aa12.79□□□□□ -0.36
CHFR-201ENST00000266880 RRBP1Q9P2E9 1410 aaKnown RBP12.79□□□□□ -0.36
CHFR-201ENST00000266880 TMEM110-MUSTN1A8MSY1 372 aa12.79□□□□□ -0.36
CHFR-201ENST00000266880 MVPQ14764 893 aaKnown RBP12.79□□□□□ -0.36
CHFR-201ENST00000266880 PHAXQ9H814 394 aaKnown RBP12.79□□□□□ -0.36
CHFR-201ENST00000266880 GBP7Q8N8V2 638 aaPredicted RBP12.79□□□□□ -0.36
CHFR-201ENST00000266880 STMN4Q9H169 189 aaPredicted RBP12.79□□□□□ -0.36
CHFR-201ENST00000266880 STMN2Q93045 179 aa12.79□□□□□ -0.36
CHFR-201ENST00000266880 KIAA0753Q2KHM9 967 aa12.79□□□□□ -0.36
CHFR-201ENST00000266880 CCDC144CPQ8IYA2 1237 aa12.79□□□□□ -0.36
CHFR-201ENST00000266880 PRC1O43663 620 aa12.79□□□□□ -0.36
CHFR-201ENST00000266880 NACADO15069 1562 aa12.79□□□□□ -0.36
CHFR-201ENST00000266880 A0A1B0GUA9 196 aa12.79□□□□□ -0.36
CHFR-201ENST00000266880 CTAGE15A4D2H0 777 aa12.79□□□□□ -0.36
CHFR-201ENST00000266880 CTAGE8P0CG41 777 aa12.79□□□□□ -0.36
CHFR-201ENST00000266880 CTAGE6Q86UF2 777 aa12.79□□□□□ -0.36
CHFR-201ENST00000266880 CTAGE4Q8IX94 777 aa12.79□□□□□ -0.36
CHFR-201ENST00000266880 CCDC170Q8IYT3 715 aa12.78□□□□□ -0.36
CHFR-201ENST00000266880 PLEKHH1Q9ULM0 1364 aa12.78□□□□□ -0.36
CHFR-201ENST00000266880 ATP11AP98196 1134 aa12.78□□□□□ -0.36
CHFR-201ENST00000266880 TNIP1Q15025 636 aa12.78□□□□□ -0.36
CHFR-201ENST00000266880 CARMIL2Q6F5E8 1435 aa12.78□□□□□ -0.36
CHFR-201ENST00000266880 CTAGE9A4FU28 777 aa12.78□□□□□ -0.36
CHFR-201ENST00000266880 LARP6Q9BRS8 491 aaKnown RBP12.78□□□□□ -0.36
CHFR-201ENST00000266880 SSX2IPQ9Y2D8 614 aa12.78□□□□□ -0.36
CHFR-201ENST00000266880 CEP85LQ5SZL2 805 aa12.78□□□□□ -0.36
CHFR-201ENST00000266880 SAMD15Q9P1V8 674 aa12.78□□□□□ -0.36
CHFR-201ENST00000266880 ZNF853P0CG23 659 aa12.78□□□□□ -0.36
CHFR-201ENST00000266880 GOLGA8BA8MQT2 603 aa12.78□□□□□ -0.36
CHFR-201ENST00000266880 ZSCAN25Q6NSZ9 544 aa12.78□□□□□ -0.36
CHFR-201ENST00000266880 TTC14Q96N46 770 aa12.78□□□□□ -0.36
CHFR-201ENST00000266880 KRT13P13646 458 aa12.77□□□□□ -0.36
CHFR-201ENST00000266880 LMNTD2Q8IXW0 634 aa12.77□□□□□ -0.36
CHFR-201ENST00000266880 KCNK9Q9NPC2 374 aa12.77□□□□□ -0.36
CHFR-201ENST00000266880 SH2B1Q9NRF2 756 aaPredicted RBP12.77□□□□□ -0.36
CHFR-201ENST00000266880 GBP1P32455 592 aa12.77□□□□□ -0.36
CHFR-201ENST00000266880 PRKAR2BP31323 418 aa12.77□□□□□ -0.36
CHFR-201ENST00000266880 PPP4R3AQ6IN85 833 aa12.77□□□□□ -0.36
CHFR-201ENST00000266880 TMEM57Q8N5G2 664 aa12.77□□□□□ -0.36
CHFR-201ENST00000266880 FAM76AQ8TAV0 307 aa12.77□□□□□ -0.37
CHFR-201ENST00000266880 PPP1R12CQ9BZL4 782 aa12.77□□□□□ -0.37
CHFR-201ENST00000266880 NOLC1Q14978 699 aaKnown RBP eCLIP12.77□□□□□ -0.37
CHFR-201ENST00000266880 TCERG1LQ5VWI1 586 aa12.77□□□□□ -0.37
CHFR-201ENST00000266880 ZMAT2Q96NC0 199 aaKnown RBP12.77□□□□□ -0.37
CHFR-201ENST00000266880 IL1RAPL2Q9NP60 686 aa12.77□□□□□ -0.37
CHFR-201ENST00000266880 MAP3K9P80192 1104 aa12.77□□□□□ -0.37
CHFR-201ENST00000266880 SKAP1Q86WV1 359 aa12.77□□□□□ -0.37
CHFR-201ENST00000266880 RGS22Q8NE09 1264 aa12.77□□□□□ -0.37
CHFR-201ENST00000266880 RHOXF2BP0C7M4 288 aa12.77□□□□□ -0.37
CHFR-201ENST00000266880 RHOXF2Q9BQY4 288 aa12.77□□□□□ -0.37
CHFR-201ENST00000266880 PANK2Q9BZ23 570 aa12.77□□□□□ -0.37
CHFR-201ENST00000266880 SKILP12757 684 aa12.76□□□□□ -0.37
CHFR-201ENST00000266880 HCLS1P14317 486 aaPredicted RBP12.76□□□□□ -0.37
CHFR-201ENST00000266880 CCDC174Q6PII3 467 aa12.76□□□□□ -0.37
CHFR-201ENST00000266880 MMRN2Q9H8L6 949 aa12.76□□□□□ -0.37
CHFR-201ENST00000266880 SMG6Q86US8 1419 aaKnown RBP12.76□□□□□ -0.37
CHFR-201ENST00000266880 CASQ2O14958 399 aaPredicted RBP12.76□□□□□ -0.37
CHFR-201ENST00000266880 PTGS1P23219 599 aa12.76□□□□□ -0.37
CHFR-201ENST00000266880 DBN1Q16643 649 aa12.76□□□□□ -0.37
CHFR-201ENST00000266880 MPHOSPH8Q99549 860 aa12.76□□□□□ -0.37
CHFR-201ENST00000266880 GJC1P36383 396 aa12.76□□□□□ -0.37
CHFR-201ENST00000266880 HSP90AA4PQ58FG1 418 aa12.76□□□□□ -0.37
CHFR-201ENST00000266880 HDGFL1Q5TGJ6 251 aa12.76□□□□□ -0.37
CHFR-201ENST00000266880 RBM42Q9BTD8 480 aaKnown RBP12.76□□□□□ -0.37
CHFR-201ENST00000266880 MKRN1Q9UHC7 482 aaKnown RBP12.76□□□□□ -0.37
CHFR-201ENST00000266880 DDX27Q96GQ7 796 aaKnown RBP12.76□□□□□ -0.37
CHFR-201ENST00000266880 U3KPZ7 1027 aaPredicted RBP12.76□□□□□ -0.37
CHFR-201ENST00000266880 ACTN2P35609 894 aa12.76□□□□□ -0.37
CHFR-201ENST00000266880 RABGAP1Q9Y3P9 1069 aa12.76□□□□□ -0.37
CHFR-201ENST00000266880 RAD54L2Q9Y4B4 1467 aa12.76□□□□□ -0.37
CHFR-201ENST00000266880 CCT2P78371 535 aaKnown RBP12.76□□□□□ -0.37
CHFR-201ENST00000266880 CCDC25Q86WR0 208 aa12.76□□□□□ -0.37
CHFR-201ENST00000266880 EPSTI1Q96J88 318 aa12.76□□□□□ -0.37
CHFR-201ENST00000266880 ZNF165P49910 485 aa12.75□□□□□ -0.37
CHFR-201ENST00000266880 DIXDC1Q155Q3 683 aa12.75□□□□□ -0.37
CHFR-201ENST00000266880 IFT81Q8WYA0 676 aa12.75□□□□□ -0.37
CHFR-201ENST00000266880 AKR1B10O60218 316 aa12.75□□□□□ -0.37
CHFR-201ENST00000266880 MTHFSP49914 203 aa12.75□□□□□ -0.37
CHFR-201ENST00000266880 TFIP11Q9UBB9 837 aaKnown RBP12.75□□□□□ -0.37
CHFR-201ENST00000266880 TMEM266Q2M3C6 531 aa12.75□□□□□ -0.37
CHFR-201ENST00000266880 DDX12PQ92771 950 aa12.75□□□□□ -0.37
CHFR-201ENST00000266880 DDX19AQ9NUU7 478 aaKnown RBP12.75□□□□□ -0.37
CHFR-201ENST00000266880 MYL6BP14649 208 aa12.75□□□□□ -0.37
CHFR-201ENST00000266880 MAP2K2P36507 400 aa12.75□□□□□ -0.37
CHFR-201ENST00000266880 INTS8Q75QN2 995 aaKnown RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms