RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 CCDC61Q9Y6R9 512 aa17.79■□□□□ 0.44
XRCC1-201ENST00000262887 FOXO3O43524 673 aa17.78■□□□□ 0.44
XRCC1-201ENST00000262887 TPD52L1Q16890 204 aaPredicted RBP17.78■□□□□ 0.44
XRCC1-201ENST00000262887 FBXO31Q5XUX0 539 aaPredicted RBP17.78■□□□□ 0.44
XRCC1-201ENST00000262887 UBTFL1P0CB47 393 aaPredicted RBP17.78■□□□□ 0.44
XRCC1-201ENST00000262887 KRT85P78386 507 aa17.78■□□□□ 0.44
XRCC1-201ENST00000262887 ARHGAP30Q7Z6I6 1101 aaPredicted RBP17.78■□□□□ 0.44
XRCC1-201ENST00000262887 NECTIN2Q92692 538 aa17.78■□□□□ 0.44
XRCC1-201ENST00000262887 TRIM5Q9C035 493 aa17.78■□□□□ 0.44
XRCC1-201ENST00000262887 SURF6O75683 361 aaKnown RBP17.77■□□□□ 0.44
XRCC1-201ENST00000262887 ZNF75DP51815 510 aa17.77■□□□□ 0.44
XRCC1-201ENST00000262887 TTC6Q86TZ1 520 aa17.77■□□□□ 0.44
XRCC1-201ENST00000262887 CBX8Q9HC52 389 aa17.77■□□□□ 0.44
XRCC1-201ENST00000262887 PDRG1Q9NUG6 133 aa17.77■□□□□ 0.44
XRCC1-201ENST00000262887 MON2Q7Z3U7 1717 aa17.77■□□□□ 0.44
XRCC1-201ENST00000262887 ANO6Q4KMQ2 910 aa17.77■□□□□ 0.44
XRCC1-201ENST00000262887 HSP90AB2PQ58FF8 381 aa17.77■□□□□ 0.44
XRCC1-201ENST00000262887 CCDC30Q5VVM6 783 aa17.77■□□□□ 0.44
XRCC1-201ENST00000262887 PLA2G4DQ86XP0 818 aa17.77■□□□□ 0.44
XRCC1-201ENST00000262887 CKAP2LQ8IYA6 745 aa17.77■□□□□ 0.44
XRCC1-201ENST00000262887 ZSCAN31Q96LW9 406 aaPredicted RBP17.77■□□□□ 0.44
XRCC1-201ENST00000262887 SH2B1Q9NRF2 756 aaPredicted RBP17.77■□□□□ 0.44
XRCC1-201ENST00000262887 RAB11FIP3O75154 756 aa17.76■□□□□ 0.43
XRCC1-201ENST00000262887 LIG1P18858 919 aa17.76■□□□□ 0.43
XRCC1-201ENST00000262887 TERF2Q15554 542 aa17.76■□□□□ 0.43
XRCC1-201ENST00000262887 KRT222Q8N1A0 295 aa17.76■□□□□ 0.43
XRCC1-201ENST00000262887 JAKMIP1Q96N16 626 aaKnown RBP17.76■□□□□ 0.43
XRCC1-201ENST00000262887 TNMDQ9H2S6 317 aa17.76■□□□□ 0.43
XRCC1-201ENST00000262887 DIP2BQ9P265 1576 aa17.76■□□□□ 0.43
XRCC1-201ENST00000262887 VPS53Q5VIR6 699 aa17.76■□□□□ 0.43
XRCC1-201ENST00000262887 SSH3Q8TE77 659 aa17.76■□□□□ 0.43
XRCC1-201ENST00000262887 CCDC66A2RUB6 948 aa17.76■□□□□ 0.43
XRCC1-201ENST00000262887 RHPN1Q8TCX5 695 aa17.76■□□□□ 0.43
XRCC1-201ENST00000262887 USP44Q9H0E7 712 aa17.76■□□□□ 0.43
XRCC1-201ENST00000262887 C3P01024 1663 aa17.75■□□□□ 0.43
XRCC1-201ENST00000262887 IRX5P78411 483 aaPredicted RBP17.75■□□□□ 0.43
XRCC1-201ENST00000262887 MTHFSDQ2M296 383 aaKnown RBP17.75■□□□□ 0.43
XRCC1-201ENST00000262887 CEP135Q66GS9 1140 aa17.75■□□□□ 0.43
XRCC1-201ENST00000262887 FERMT3Q86UX7 667 aa17.75■□□□□ 0.43
XRCC1-201ENST00000262887 ZNF397Q8NF99 534 aaPredicted RBP17.75■□□□□ 0.43
XRCC1-201ENST00000262887 CYP46A1Q9Y6A2 500 aa17.75■□□□□ 0.43
XRCC1-201ENST00000262887 GOLGA6L4A6NEF3 574 aa17.74■□□□□ 0.43
XRCC1-201ENST00000262887 ADCK5Q3MIX3 580 aa17.74■□□□□ 0.43
XRCC1-201ENST00000262887 LARP1BQ659C4 914 aaKnown RBP17.74■□□□□ 0.43
XRCC1-201ENST00000262887 ZNF592Q92610 1267 aa17.74■□□□□ 0.43
XRCC1-201ENST00000262887 DACT1Q9NYF0 836 aa17.74■□□□□ 0.43
XRCC1-201ENST00000262887 PPP1R42Q7Z4L9 355 aa17.74■□□□□ 0.43
XRCC1-201ENST00000262887 CACTINQ8WUQ7 758 aaKnown RBP17.74■□□□□ 0.43
XRCC1-201ENST00000262887 ELP1O95163 1332 aa17.74■□□□□ 0.43
XRCC1-201ENST00000262887 XRN1Q8IZH2 1706 aaKnown RBP17.73■□□□□ 0.43
XRCC1-201ENST00000262887 ST3GAL1Q11201 340 aa17.73■□□□□ 0.43
XRCC1-201ENST00000262887 ME3Q16798 604 aa17.73■□□□□ 0.43
XRCC1-201ENST00000262887 PRPF40BQ6NWY9 871 aaKnown RBP17.73■□□□□ 0.43
XRCC1-201ENST00000262887 NECAB1Q8N987 351 aa17.73■□□□□ 0.43
XRCC1-201ENST00000262887 TDRD7Q8NHU6 1098 aaKnown RBP17.73■□□□□ 0.43
XRCC1-201ENST00000262887 KIF1BPQ96EK5 621 aa17.73■□□□□ 0.43
XRCC1-201ENST00000262887 CLIP2Q9UDT6 1046 aa17.73■□□□□ 0.43
XRCC1-201ENST00000262887 FAM173BQ6P4H8 233 aa17.73■□□□□ 0.43
XRCC1-201ENST00000262887 MAP3K19Q56UN5 1328 aa17.72■□□□□ 0.43
XRCC1-201ENST00000262887 CDC37L1Q7L3B6 337 aa17.72■□□□□ 0.43
XRCC1-201ENST00000262887 TXNDC2Q86VQ3 553 aa17.72■□□□□ 0.43
XRCC1-201ENST00000262887 KMT5BQ4FZB7 885 aa17.72■□□□□ 0.43
XRCC1-201ENST00000262887 RUFY2Q8WXA3 655 aa17.72■□□□□ 0.43
XRCC1-201ENST00000262887 ZSWIM6Q9HCJ5 1215 aa17.72■□□□□ 0.43
XRCC1-201ENST00000262887 SOX12O15370 315 aa17.71■□□□□ 0.43
XRCC1-201ENST00000262887 PTH1RQ03431 593 aa17.71■□□□□ 0.43
XRCC1-201ENST00000262887 DDX19AQ9NUU7 478 aaKnown RBP17.71■□□□□ 0.43
XRCC1-201ENST00000262887 CCDC171Q6TFL3 1326 aa17.71■□□□□ 0.43
XRCC1-201ENST00000262887 KCNJ4P48050 445 aa17.71■□□□□ 0.43
XRCC1-201ENST00000262887 TM6SF1Q9BZW5 370 aa17.71■□□□□ 0.43
XRCC1-201ENST00000262887 TTC21BQ7Z4L5 1316 aa17.71■□□□□ 0.43
XRCC1-201ENST00000262887 SRGAP3O43295 1099 aa17.71■□□□□ 0.42
XRCC1-201ENST00000262887 ZNF165P49910 485 aa17.71■□□□□ 0.42
XRCC1-201ENST00000262887 SLC20A2Q08357 652 aa17.71■□□□□ 0.42
XRCC1-201ENST00000262887 DDX54Q8TDD1 881 aaKnown RBP17.71■□□□□ 0.42
XRCC1-201ENST00000262887 CCDC144BQ3MJ40 725 aa17.7■□□□□ 0.42
XRCC1-201ENST00000262887 CCDC144CPQ8IYA2 1237 aa17.7■□□□□ 0.42
XRCC1-201ENST00000262887 SPATA32Q96LK8 384 aa17.7■□□□□ 0.42
XRCC1-201ENST00000262887 SCAND2PQ9GZW5 306 aaPredicted RBP17.7■□□□□ 0.42
XRCC1-201ENST00000262887 ITSN1Q15811 1721 aa17.7■□□□□ 0.42
XRCC1-201ENST00000262887 FAM208AQ9UK61 1670 aaKnown RBP17.7■□□□□ 0.42
XRCC1-201ENST00000262887 TTC21AQ8NDW8 1320 aa17.7■□□□□ 0.42
XRCC1-201ENST00000262887 POLA2Q14181 598 aa17.7■□□□□ 0.42
XRCC1-201ENST00000262887 RBM43Q6ZSC3 357 aaKnown RBP17.7■□□□□ 0.42
XRCC1-201ENST00000262887 ZNF215Q9UL58 517 aaPredicted RBP17.7■□□□□ 0.42
XRCC1-201ENST00000262887 RGPD1P0DJD0 1748 aa17.69■□□□□ 0.42
XRCC1-201ENST00000262887 NPHP3Q7Z494 1330 aa17.69■□□□□ 0.42
XRCC1-201ENST00000262887 PXDNLA1KZ92 1463 aa17.69■□□□□ 0.42
XRCC1-201ENST00000262887 PDCP20941 246 aa17.69■□□□□ 0.42
XRCC1-201ENST00000262887 CDC25BP30305 580 aa17.69■□□□□ 0.42
XRCC1-201ENST00000262887 CLSTN2Q9H4D0 955 aa17.69■□□□□ 0.42
XRCC1-201ENST00000262887 FAM53CQ9NYF3 392 aa17.69■□□□□ 0.42
XRCC1-201ENST00000262887 TPCN1Q9ULQ1 816 aa17.69■□□□□ 0.42
XRCC1-201ENST00000262887 AKAP12Q02952 1782 aa17.69■□□□□ 0.42
XRCC1-201ENST00000262887 ZKSCAN1P17029 563 aaPredicted RBP17.69■□□□□ 0.42
XRCC1-201ENST00000262887 TIGD1Q96MW7 591 aa17.69■□□□□ 0.42
XRCC1-201ENST00000262887 DNAJC2Q99543 621 aaKnown RBP17.69■□□□□ 0.42
XRCC1-201ENST00000262887 DNAJC25Q9H1X3 360 aa17.69■□□□□ 0.42
XRCC1-201ENST00000262887 PPP6R1Q9UPN7 881 aa17.69■□□□□ 0.42
XRCC1-201ENST00000262887 GLRX3O76003 335 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms