RNA–Protein interactions for RNA: ENST00000262812.8

COPE-201, Transcript of coatomer protein complex subunit epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPE, Length 1,141 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-201ENST00000262812 PIM2Q9P1W9 311 aa23.97■■□□□ 1.43
COPE-201ENST00000262812 NIP7Q9Y221 180 aaKnown RBP eCLIP23.97■■□□□ 1.43
COPE-201ENST00000262812 CARMIL3Q8ND23 1372 aa23.96■■□□□ 1.43
COPE-201ENST00000262812 ERBB4Q15303 1308 aa23.96■■□□□ 1.43
COPE-201ENST00000262812 PRR5LQ6MZQ0 368 aa23.96■■□□□ 1.43
COPE-201ENST00000262812 ELL2O00472 640 aaPredicted RBP23.95■■□□□ 1.42
COPE-201ENST00000262812 DUSP27Q5VZP5 1158 aa23.95■■□□□ 1.42
COPE-201ENST00000262812 NBPF5PQ86XG9 351 aaPredicted RBP23.95■■□□□ 1.42
COPE-201ENST00000262812 C2CD5Q86YS7 1000 aa23.95■■□□□ 1.42
COPE-201ENST00000262812 MAP3K15Q6ZN16 1313 aa23.94■■□□□ 1.42
COPE-201ENST00000262812 AIMP1Q12904 312 aaKnown RBP23.94■■□□□ 1.42
COPE-201ENST00000262812 DALRD3Q5D0E6 543 aaKnown RBP23.94■■□□□ 1.42
COPE-201ENST00000262812 WWC1Q8IX03 1113 aa23.94■■□□□ 1.42
COPE-201ENST00000262812 CNBD1Q8NA66 436 aa23.94■■□□□ 1.42
COPE-201ENST00000262812 ERVV-1B6SEH8 477 aa23.93■■□□□ 1.42
COPE-201ENST00000262812 HDGFL1Q5TGJ6 251 aa23.93■■□□□ 1.42
COPE-201ENST00000262812 H0YIN7 160 aa23.92■■□□□ 1.42
COPE-201ENST00000262812 CCDC27Q2M243 656 aa23.92■■□□□ 1.42
COPE-201ENST00000262812 ARHGAP27Q6ZUM4 889 aa23.92■■□□□ 1.42
COPE-201ENST00000262812 LRP10Q7Z4F1 713 aa23.92■■□□□ 1.42
COPE-201ENST00000262812 BRIP1Q9BX63 1249 aa23.92■■□□□ 1.42
COPE-201ENST00000262812 LAMB4A4D0S4 1761 aa23.91■■□□□ 1.42
COPE-201ENST00000262812 N4BP2Q86UW6 1770 aaPredicted RBP23.91■■□□□ 1.42
COPE-201ENST00000262812 ST5P78524 1137 aa23.91■■□□□ 1.42
COPE-201ENST00000262812 COPS6Q7L5N1 327 aa23.91■■□□□ 1.42
COPE-201ENST00000262812 XAGE3Q8WTP9 111 aa23.91■■□□□ 1.42
COPE-201ENST00000262812 DDX21Q9NR30 783 aaKnown RBP eCLIP23.91■■□□□ 1.42
COPE-201ENST00000262812 CHPF2Q9P2E5 772 aa23.91■■□□□ 1.42
COPE-201ENST00000262812 SCN7AQ01118 1682 aa23.91■■□□□ 1.42
COPE-201ENST00000262812 KIF13BQ9NQT8 1826 aa23.91■■□□□ 1.42
COPE-201ENST00000262812 RGL2O15211 777 aa23.9■■□□□ 1.42
COPE-201ENST00000262812 GPTP24298 496 aa23.9■■□□□ 1.42
COPE-201ENST00000262812 PDE6BP35913 854 aa23.9■■□□□ 1.42
COPE-201ENST00000262812 TPTE2Q6XPS3 522 aa23.9■■□□□ 1.42
COPE-201ENST00000262812 C8orf58Q8NAV2 365 aa23.9■■□□□ 1.42
COPE-201ENST00000262812 TSR2Q969E8 191 aaKnown RBP23.9■■□□□ 1.42
COPE-201ENST00000262812 HOXB7P09629 217 aa23.89■■□□□ 1.41
COPE-201ENST00000262812 GTF2E1P29083 439 aaPredicted RBP23.89■■□□□ 1.41
COPE-201ENST00000262812 ZNF622Q969S3 477 aaKnown RBP eCLIP23.89■■□□□ 1.41
COPE-201ENST00000262812 KIAA1551Q9HCM1 1747 aa23.87■■□□□ 1.41
COPE-201ENST00000262812 GIGYF2Q6Y7W6 1299 aaKnown RBP23.87■■□□□ 1.41
COPE-201ENST00000262812 DBF4Q9UBU7 674 aaPredicted RBP23.87■■□□□ 1.41
COPE-201ENST00000262812 AFDNP55196 1824 aaKnown RBP23.87■■□□□ 1.41
COPE-201ENST00000262812 TTLL6Q8N841 843 aa23.86■■□□□ 1.41
COPE-201ENST00000262812 ZNF784Q8NCA9 323 aaPredicted RBP23.86■■□□□ 1.41
COPE-201ENST00000262812 NRXN2Q9P2S2 1712 aa23.85■■□□□ 1.41
COPE-201ENST00000262812 TSPYL6Q8N831 410 aa23.85■■□□□ 1.41
COPE-201ENST00000262812 BCORQ6W2J9 1755 aa23.84■■□□□ 1.41
COPE-201ENST00000262812 NCBP3Q53F19 620 aaKnown RBP23.84■■□□□ 1.41
COPE-201ENST00000262812 SUSD4Q5VX71 490 aa23.84■■□□□ 1.41
COPE-201ENST00000262812 NUTM1Q86Y26 1132 aa23.84■■□□□ 1.41
COPE-201ENST00000262812 ZNF34Q8IZ26 560 aa23.84■■□□□ 1.41
COPE-201ENST00000262812 ZNF219Q9P2Y4 722 aaPredicted RBP23.84■■□□□ 1.41
COPE-201ENST00000262812 NYXQ9GZU5 481 aa23.83■■□□□ 1.41
COPE-201ENST00000262812 HYPKQ9NX55 129 aa23.83■■□□□ 1.41
COPE-201ENST00000262812 PDZRN3Q9UPQ7 1066 aa23.83■■□□□ 1.41
COPE-201ENST00000262812 UBN2Q6ZU65 1347 aa23.83■■□□□ 1.4
COPE-201ENST00000262812 ERFEQ4G0M1 354 aa23.82■■□□□ 1.4
COPE-201ENST00000262812 WDR63Q8IWG1 891 aa23.82■■□□□ 1.4
COPE-201ENST00000262812 IL16Q14005 1332 aa23.82■■□□□ 1.4
COPE-201ENST00000262812 SRGNP10124 158 aa23.81■■□□□ 1.4
COPE-201ENST00000262812 TCERG1O14776 1098 aaKnown RBP23.8■■□□□ 1.4
COPE-201ENST00000262812 ANKRD13DQ6ZTN6 518 aa23.8■■□□□ 1.4
COPE-201ENST00000262812 ZNF428Q96B54 188 aa23.8■■□□□ 1.4
COPE-201ENST00000262812 ATP10DQ9P241 1426 aa23.8■■□□□ 1.4
COPE-201ENST00000262812 CCDC30Q5VVM6 783 aa23.79■■□□□ 1.4
COPE-201ENST00000262812 PPP1R42Q7Z4L9 355 aa23.79■■□□□ 1.4
COPE-201ENST00000262812 MASTLQ96GX5 879 aa23.79■■□□□ 1.4
COPE-201ENST00000262812 PHAXQ9H814 394 aaKnown RBP23.79■■□□□ 1.4
COPE-201ENST00000262812 C21orf2O43822 256 aa23.78■■□□□ 1.4
COPE-201ENST00000262812 TCIRG1Q13488 830 aa23.78■■□□□ 1.4
COPE-201ENST00000262812 PARP10Q53GL7 1025 aa23.78■■□□□ 1.4
COPE-201ENST00000262812 HSP90AB3PQ58FF7 597 aa23.78■■□□□ 1.4
COPE-201ENST00000262812 STYK1Q6J9G0 422 aa23.78■■□□□ 1.4
COPE-201ENST00000262812 PLBD2Q8NHP8 589 aa23.78■■□□□ 1.4
COPE-201ENST00000262812 TWISTNBQ3B726 338 aaPredicted RBP23.77■■□□□ 1.4
COPE-201ENST00000262812 CNKSR1Q969H4 720 aa23.77■■□□□ 1.4
COPE-201ENST00000262812 UTP14AQ9BVJ6 771 aaKnown RBP23.77■■□□□ 1.4
COPE-201ENST00000262812 SPINK5Q9NQ38 1064 aaPredicted RBP23.77■■□□□ 1.4
COPE-201ENST00000262812 CHD4Q14839 1912 aa23.76■■□□□ 1.39
COPE-201ENST00000262812 NTSR2O95665 410 aa23.76■■□□□ 1.39
COPE-201ENST00000262812 NPR1P16066 1061 aa23.76■■□□□ 1.39
COPE-201ENST00000262812 ZNF526Q8TF50 670 aaPredicted RBP23.76■■□□□ 1.39
COPE-201ENST00000262812 CHMP4AQ9BY43 222 aa23.76■■□□□ 1.39
COPE-201ENST00000262812 FANCIQ9NVI1 1328 aa23.76■■□□□ 1.39
COPE-201ENST00000262812 KLRG2A4D1S0 409 aaPredicted RBP23.75■■□□□ 1.39
COPE-201ENST00000262812 CCER2I3L3R5 266 aa23.75■■□□□ 1.39
COPE-201ENST00000262812 C9orf131Q5VYM1 1079 aa23.75■■□□□ 1.39
COPE-201ENST00000262812 RIC3Q7Z5B4 369 aa23.75■■□□□ 1.39
COPE-201ENST00000262812 NLRP10Q86W26 655 aa23.75■■□□□ 1.39
COPE-201ENST00000262812 ABCC12Q96J65 1359 aa23.75■■□□□ 1.39
COPE-201ENST00000262812 ATP5J2-PTCD1G3V325 749 aa23.74■■□□□ 1.39
COPE-201ENST00000262812 RASSF7Q02833 373 aa23.74■■□□□ 1.39
COPE-201ENST00000262812 GOLGA2Q08379 1002 aa23.74■■□□□ 1.39
COPE-201ENST00000262812 DIEXFQ68CQ4 756 aaKnown RBP23.74■■□□□ 1.39
COPE-201ENST00000262812 PRPF40BQ6NWY9 871 aaKnown RBP23.74■■□□□ 1.39
COPE-201ENST00000262812 ANKRD31Q8N7Z5 1873 aa23.74■■□□□ 1.39
COPE-201ENST00000262812 EXOSC9Q06265 439 aaKnown RBP23.73■■□□□ 1.39
COPE-201ENST00000262812 STK31Q9BXU1 1019 aa23.73■■□□□ 1.39
COPE-201ENST00000262812 TRMT112Q9UI30 125 aaKnown RBP23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms