RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 SLU7O95391 586 aaKnown RBP18.96■□□□□ 0.63
SREBF1-201ENST00000261646 CPA1P15085 419 aa18.96■□□□□ 0.63
SREBF1-201ENST00000261646 FILIP1LQ4L180 1135 aa18.96■□□□□ 0.63
SREBF1-201ENST00000261646 ZNF397Q8NF99 534 aaPredicted RBP18.96■□□□□ 0.63
SREBF1-201ENST00000261646 FOXO3O43524 673 aa18.96■□□□□ 0.63
SREBF1-201ENST00000261646 BRD1O95696 1058 aa18.96■□□□□ 0.63
SREBF1-201ENST00000261646 CAVIN2O95810 425 aa18.95■□□□□ 0.62
SREBF1-201ENST00000261646 CCAR1Q8IX12 1150 aaKnown RBP18.95■□□□□ 0.62
SREBF1-201ENST00000261646 RHPN1Q8TCX5 695 aa18.95■□□□□ 0.62
SREBF1-201ENST00000261646 ZSCAN12O43309 604 aa18.95■□□□□ 0.62
SREBF1-201ENST00000261646 LMAN1P49257 510 aa18.95■□□□□ 0.62
SREBF1-201ENST00000261646 DEF6Q9H4E7 631 aa18.95■□□□□ 0.62
SREBF1-201ENST00000261646 ZSWIM4Q9H7M6 989 aa18.95■□□□□ 0.62
SREBF1-201ENST00000261646 ECHDC1Q9NTX5 307 aa18.95■□□□□ 0.62
SREBF1-201ENST00000261646 ISM2Q6H9L7 571 aa18.94■□□□□ 0.62
SREBF1-201ENST00000261646 DNAI1Q9UI46 699 aa18.94■□□□□ 0.62
SREBF1-201ENST00000261646 PATL2C9JE40 543 aaKnown RBP18.94■□□□□ 0.62
SREBF1-201ENST00000261646 TOP1P11387 765 aaKnown RBP18.94■□□□□ 0.62
SREBF1-201ENST00000261646 FAM173BQ6P4H8 233 aa18.94■□□□□ 0.62
SREBF1-201ENST00000261646 ZNF530Q6P9A1 599 aaPredicted RBP18.94■□□□□ 0.62
SREBF1-201ENST00000261646 SMARCE1Q969G3 411 aa18.94■□□□□ 0.62
SREBF1-201ENST00000261646 CCT2P78371 535 aaKnown RBP18.93■□□□□ 0.62
SREBF1-201ENST00000261646 PTPRTO14522 1441 aa18.93■□□□□ 0.62
SREBF1-201ENST00000261646 EIF2AK4Q9P2K8 1649 aaKnown RBP18.93■□□□□ 0.62
SREBF1-201ENST00000261646 NAP1L1P55209 391 aaKnown RBP18.93■□□□□ 0.62
SREBF1-201ENST00000261646 FAM193AP78312 1265 aa18.93■□□□□ 0.62
SREBF1-201ENST00000261646 PLCD3Q8N3E9 789 aa18.93■□□□□ 0.62
SREBF1-201ENST00000261646 WDR7Q9Y4E6 1490 aa18.92■□□□□ 0.62
SREBF1-201ENST00000261646 CCDC69A6NI79 296 aa18.92■□□□□ 0.62
SREBF1-201ENST00000261646 MYL6BP14649 208 aa18.92■□□□□ 0.62
SREBF1-201ENST00000261646 ARHGAP29Q52LW3 1261 aa18.92■□□□□ 0.62
SREBF1-201ENST00000261646 UGGT1Q9NYU2 1555 aa18.92■□□□□ 0.62
SREBF1-201ENST00000261646 GTF3C6Q969F1 213 aa18.92■□□□□ 0.62
SREBF1-201ENST00000261646 ZBTB9Q96C00 473 aa18.92■□□□□ 0.62
SREBF1-201ENST00000261646 ACEP12821 1306 aa18.91■□□□□ 0.62
SREBF1-201ENST00000261646 NPHP3Q7Z494 1330 aa18.91■□□□□ 0.62
SREBF1-201ENST00000261646 VGLL3A8MV65 326 aa18.91■□□□□ 0.62
SREBF1-201ENST00000261646 CASQ1P31415 396 aa18.91■□□□□ 0.62
SREBF1-201ENST00000261646 JAKMIP3Q5VZ66 844 aa18.91■□□□□ 0.62
SREBF1-201ENST00000261646 GNAT3A8MTJ3 354 aa18.91■□□□□ 0.62
SREBF1-201ENST00000261646 SLC3A2P08195 630 aaKnown RBP18.91■□□□□ 0.62
SREBF1-201ENST00000261646 GNG11P61952 73 aa18.9■□□□□ 0.62
SREBF1-201ENST00000261646 KIF4BQ2VIQ3 1234 aa18.9■□□□□ 0.62
SREBF1-201ENST00000261646 ATP8B2P98198 1209 aa18.9■□□□□ 0.62
SREBF1-201ENST00000261646 RAPGEF4Q8WZA2 1011 aa18.9■□□□□ 0.62
SREBF1-201ENST00000261646 RDXP35241 583 aaKnown RBP18.89■□□□□ 0.62
SREBF1-201ENST00000261646 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.89■□□□□ 0.628e-7■■□□□ 12.8
SREBF1-201ENST00000261646 ERICH2A1L162 156 aa18.89■□□□□ 0.61
SREBF1-201ENST00000261646 DMTNQ08495 405 aa18.89■□□□□ 0.61
SREBF1-201ENST00000261646 AOPEPQ8N6M6 819 aa18.89■□□□□ 0.61
SREBF1-201ENST00000261646 RBM8AQ9Y5S9 174 aaKnown RBP18.89■□□□□ 0.61
SREBF1-201ENST00000261646 LRRIQ1Q96JM4 1722 aa18.89■□□□□ 0.61
SREBF1-201ENST00000261646 SAMD9LQ8IVG5 1584 aa18.89■□□□□ 0.61
SREBF1-201ENST00000261646 EIF4A2Q14240 407 aaKnown RBP18.89■□□□□ 0.61
SREBF1-201ENST00000261646 EVI5LQ96CN4 794 aa18.89■□□□□ 0.61
SREBF1-201ENST00000261646 IBTKQ9P2D0 1353 aaPredicted RBP18.89■□□□□ 0.61
SREBF1-201ENST00000261646 ADGBQ8N7X0 1667 aa18.89■□□□□ 0.61
SREBF1-201ENST00000261646 AMOTL2Q9Y2J4 779 aa18.88■□□□□ 0.61
SREBF1-201ENST00000261646 MAST1Q9Y2H9 1570 aa18.88■□□□□ 0.61
SREBF1-201ENST00000261646 DNAAF4Q8WXU2 420 aa18.88■□□□□ 0.61
SREBF1-201ENST00000261646 SYT10Q6XYQ8 523 aa18.88■□□□□ 0.61
SREBF1-201ENST00000261646 ABCC2Q92887 1545 aa18.87■□□□□ 0.61
SREBF1-201ENST00000261646 LRRC2Q9BYS8 371 aa18.87■□□□□ 0.61
SREBF1-201ENST00000261646 NSFL1CQ9UNZ2 370 aaKnown RBP18.87■□□□□ 0.61
SREBF1-201ENST00000261646 GABPB1Q06547 395 aaPredicted RBP18.87■□□□□ 0.61
SREBF1-201ENST00000261646 MPRIPQ6WCQ1 1025 aa18.87■□□□□ 0.61
SREBF1-201ENST00000261646 C8orf76Q96K31 380 aa18.87■□□□□ 0.61
SREBF1-201ENST00000261646 EPB41L2O43491 1005 aaKnown RBP18.87■□□□□ 0.61
SREBF1-201ENST00000261646 ZC3H6P61129 1189 aaKnown RBP18.87■□□□□ 0.61
SREBF1-201ENST00000261646 ATP10AO60312 1499 aa18.87■□□□□ 0.61
SREBF1-201ENST00000261646 POLR3DP05423 398 aaPredicted RBP18.86■□□□□ 0.61
SREBF1-201ENST00000261646 CPLX3Q8WVH0 158 aa18.86■□□□□ 0.61
SREBF1-201ENST00000261646 BRF1Q92994 677 aa18.86■□□□□ 0.61
SREBF1-201ENST00000261646 ARFGAP3Q9NP61 516 aa18.86■□□□□ 0.61
SREBF1-201ENST00000261646 DACH1Q9UI36 760 aa18.86■□□□□ 0.61
SREBF1-201ENST00000261646 LRMPQ12912 555 aa18.86■□□□□ 0.61
SREBF1-201ENST00000261646 CCDC150Q8NCX0 1101 aa18.86■□□□□ 0.61
SREBF1-201ENST00000261646 FKBP4Q02790 459 aaKnown RBP eCLIP18.86■□□□□ 0.61
SREBF1-201ENST00000261646 ELF2Q15723 593 aa18.86■□□□□ 0.61
SREBF1-201ENST00000261646 PALD1Q9ULE6 856 aa18.85■□□□□ 0.61
SREBF1-201ENST00000261646 PI4KAP2A4QPH2 592 aa18.85■□□□□ 0.61
SREBF1-201ENST00000261646 MCM6Q14566 821 aa18.85■□□□□ 0.61
SREBF1-201ENST00000261646 RRP12Q5JTH9 1297 aaKnown RBP18.85■□□□□ 0.61
SREBF1-201ENST00000261646 TXLNBQ8N3L3 684 aa18.85■□□□□ 0.61
SREBF1-201ENST00000261646 PI4KAP1Q8N8J0 262 aa18.85■□□□□ 0.61
SREBF1-201ENST00000261646 BTBD11A6QL63 1104 aa18.85■□□□□ 0.61
SREBF1-201ENST00000261646 G2E3Q7L622 706 aa18.85■□□□□ 0.61
SREBF1-201ENST00000261646 CCDC47Q96A33 483 aaKnown RBP18.85■□□□□ 0.61
SREBF1-201ENST00000261646 NEK1Q96PY6 1258 aa18.85■□□□□ 0.61
SREBF1-201ENST00000261646 CBX8Q9HC52 389 aa18.85■□□□□ 0.61
SREBF1-201ENST00000261646 TRIM34Q9BYJ4 488 aa18.85■□□□□ 0.61
SREBF1-201ENST00000261646 PYCARDQ9ULZ3 195 aa18.85■□□□□ 0.61
SREBF1-201ENST00000261646 KIF5CO60282 957 aa18.84■□□□□ 0.61
SREBF1-201ENST00000261646 KIAA0754O94854 1291 aa18.84■□□□□ 0.61
SREBF1-201ENST00000261646 PLEKHO1Q53GL0 409 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-201ENST00000261646 KLHL10Q6JEL2 608 aa18.84■□□□□ 0.61
SREBF1-201ENST00000261646 ERO1AQ96HE7 468 aa18.84■□□□□ 0.61
SREBF1-201ENST00000261646 ZSCAN16Q9H4T2 348 aaPredicted RBP18.84■□□□□ 0.61
SREBF1-201ENST00000261646 USP16Q9Y5T5 823 aa18.84■□□□□ 0.61
SREBF1-201ENST00000261646 ABCA8O94911 1581 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms