RNA–Protein interactions for RNA: ENST00000254853.9

SLC52A1-201, Transcript of solute carrier family 52 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC52A1, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1-201ENST00000254853 TCHHQ07283 1943 aa20.55■□□□□ 0.88
SLC52A1-201ENST00000254853 CCDC183Q5T5S1 534 aa20.55■□□□□ 0.88
SLC52A1-201ENST00000254853 MPRIPQ6WCQ1 1025 aa20.55■□□□□ 0.88
SLC52A1-201ENST00000254853 PTMAP06454 111 aaKnown RBP20.54■□□□□ 0.88
SLC52A1-201ENST00000254853 MTX1Q13505 466 aa20.54■□□□□ 0.88
SLC52A1-201ENST00000254853 ZNF530Q6P9A1 599 aaPredicted RBP20.54■□□□□ 0.88
SLC52A1-201ENST00000254853 CLASRPQ8N2M8 674 aaKnown RBP20.54■□□□□ 0.88
SLC52A1-201ENST00000254853 CHMP4AQ9BY43 222 aa20.54■□□□□ 0.88
SLC52A1-201ENST00000254853 HYPKQ9NX55 129 aa20.54■□□□□ 0.88
SLC52A1-201ENST00000254853 F13A1P00488 732 aa20.54■□□□□ 0.88
SLC52A1-201ENST00000254853 GLIPR1L2Q4G1C9 344 aa20.54■□□□□ 0.88
SLC52A1-201ENST00000254853 LRRC59Q96AG4 307 aaKnown RBP20.54■□□□□ 0.88
SLC52A1-201ENST00000254853 PA2G4Q9UQ80 394 aaKnown RBP20.54■□□□□ 0.88
SLC52A1-201ENST00000254853 DTNBO60941 627 aa20.53■□□□□ 0.88
SLC52A1-201ENST00000254853 ADCK5Q3MIX3 580 aa20.53■□□□□ 0.88
SLC52A1-201ENST00000254853 ECHDC1Q9NTX5 307 aa20.53■□□□□ 0.88
SLC52A1-201ENST00000254853 MAP3K2Q9Y2U5 619 aa20.53■□□□□ 0.88
SLC52A1-201ENST00000254853 NFAT5O94916 1531 aa20.53■□□□□ 0.88
SLC52A1-201ENST00000254853 CSPP1Q1MSJ5 1256 aa20.53■□□□□ 0.88
SLC52A1-201ENST00000254853 AKAP4Q5JQC9 854 aa20.53■□□□□ 0.88
SLC52A1-201ENST00000254853 PRPF40BQ6NWY9 871 aaKnown RBP20.53■□□□□ 0.88
SLC52A1-201ENST00000254853 RUFY2Q8WXA3 655 aa20.53■□□□□ 0.88
SLC52A1-201ENST00000254853 JAKMIP1Q96N16 626 aaKnown RBP20.53■□□□□ 0.88
SLC52A1-201ENST00000254853 PROSER3Q2NL68 480 aa20.52■□□□□ 0.88
SLC52A1-201ENST00000254853 CCDC83Q8IWF9 413 aa20.52■□□□□ 0.88
SLC52A1-201ENST00000254853 PDRG1Q9NUG6 133 aa20.52■□□□□ 0.88
SLC52A1-201ENST00000254853 C9orf78Q9NZ63 289 aaPredicted RBP20.52■□□□□ 0.88
SLC52A1-201ENST00000254853 DBF4Q9UBU7 674 aaPredicted RBP20.52■□□□□ 0.88
SLC52A1-201ENST00000254853 FIBPO43427 364 aa20.52■□□□□ 0.88
SLC52A1-201ENST00000254853 UBE2HP62256 183 aa20.52■□□□□ 0.88
SLC52A1-201ENST00000254853 FAM184AQ8NB25 1140 aa20.52■□□□□ 0.88
SLC52A1-201ENST00000254853 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.52■□□□□ 0.88
SLC52A1-201ENST00000254853 UVSSAQ2YD98 709 aa20.51■□□□□ 0.87
SLC52A1-201ENST00000254853 IFIT2P09913 472 aaKnown RBP20.51■□□□□ 0.87
SLC52A1-201ENST00000254853 GJB2P29033 226 aa20.51■□□□□ 0.87
SLC52A1-201ENST00000254853 SETD1BQ9UPS6 1966 aaKnown RBP20.51■□□□□ 0.87
SLC52A1-201ENST00000254853 ALDH1L1O75891 902 aa20.5■□□□□ 0.87
SLC52A1-201ENST00000254853 CWF19L2Q2TBE0 894 aaKnown RBP20.5■□□□□ 0.87
SLC52A1-201ENST00000254853 PLEKHO1Q53GL0 409 aaPredicted RBP20.5■□□□□ 0.87
SLC52A1-201ENST00000254853 VPS53Q5VIR6 699 aa20.5■□□□□ 0.87
SLC52A1-201ENST00000254853 DDX54Q8TDD1 881 aaKnown RBP20.5■□□□□ 0.87
SLC52A1-201ENST00000254853 KCNB2Q92953 911 aa20.5■□□□□ 0.87
SLC52A1-201ENST00000254853 RBM33Q96EV2 1170 aaKnown RBP20.5■□□□□ 0.87
SLC52A1-201ENST00000254853 ZSWIM6Q9HCJ5 1215 aa20.5■□□□□ 0.87
SLC52A1-201ENST00000254853 USP25Q9UHP3 1055 aa20.5■□□□□ 0.87
SLC52A1-201ENST00000254853 RNMTO43148 476 aaKnown RBP20.49■□□□□ 0.87
SLC52A1-201ENST00000254853 RBM10P98175 930 aaKnown RBP20.49■□□□□ 0.87
SLC52A1-201ENST00000254853 KSR2Q6VAB6 950 aa20.49■□□□□ 0.87
SLC52A1-201ENST00000254853 MPNDQ8N594 471 aa20.49■□□□□ 0.87
SLC52A1-201ENST00000254853 GPATCH3Q96I76 525 aa20.49■□□□□ 0.87
SLC52A1-201ENST00000254853 PDCL3Q9H2J4 239 aa20.49■□□□□ 0.87
SLC52A1-201ENST00000254853 MTMR6Q9Y217 621 aa20.49■□□□□ 0.87
SLC52A1-201ENST00000254853 ATP6V1DQ9Y5K8 247 aa20.49■□□□□ 0.87
SLC52A1-201ENST00000254853 CYP46A1Q9Y6A2 500 aa20.49■□□□□ 0.87
SLC52A1-201ENST00000254853 LMO7Q8WWI1 1683 aa20.49■□□□□ 0.87
SLC52A1-201ENST00000254853 UQCRHLA0A096LP55 91 aa20.49■□□□□ 0.87
SLC52A1-201ENST00000254853 LETM1O95202 739 aaPredicted RBP20.49■□□□□ 0.87
SLC52A1-201ENST00000254853 UQCRHP07919 91 aa20.49■□□□□ 0.87
SLC52A1-201ENST00000254853 HCLS1P14317 486 aaPredicted RBP20.49■□□□□ 0.87
SLC52A1-201ENST00000254853 AACSQ86V21 672 aa20.49■□□□□ 0.87
SLC52A1-201ENST00000254853 ERC1Q8IUD2 1116 aa20.49■□□□□ 0.87
SLC52A1-201ENST00000254853 TM6SF1Q9BZW5 370 aa20.49■□□□□ 0.87
SLC52A1-201ENST00000254853 RGPD2P0DJD1 1756 aa20.48■□□□□ 0.87
SLC52A1-201ENST00000254853 PRAMEF22A3QJZ6 481 aa20.48■□□□□ 0.87
SLC52A1-201ENST00000254853 GIGYF1O75420 1035 aaPredicted RBP20.48■□□□□ 0.87
SLC52A1-201ENST00000254853 ST3GAL1Q11201 340 aa20.48■□□□□ 0.87
SLC52A1-201ENST00000254853 EVI5LQ96CN4 794 aa20.48■□□□□ 0.87
SLC52A1-201ENST00000254853 DNM1Q05193 864 aaKnown RBP20.48■□□□□ 0.87
SLC52A1-201ENST00000254853 NECTIN1Q15223 517 aa20.48■□□□□ 0.87
SLC52A1-201ENST00000254853 ZSCAN31Q96LW9 406 aaPredicted RBP20.48■□□□□ 0.87
SLC52A1-201ENST00000254853 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.48■□□□□ 0.87
SLC52A1-201ENST00000254853 PXDNQ92626 1479 aa20.47■□□□□ 0.87
SLC52A1-201ENST00000254853 CCDC171Q6TFL3 1326 aa20.47■□□□□ 0.87
SLC52A1-201ENST00000254853 KIAA2012Q0VF49 1180 aa20.47■□□□□ 0.87
SLC52A1-201ENST00000254853 PSME1Q06323 249 aa20.46■□□□□ 0.87
SLC52A1-201ENST00000254853 SH2B1Q9NRF2 756 aaPredicted RBP20.46■□□□□ 0.87
SLC52A1-201ENST00000254853 ME3Q16798 604 aa20.46■□□□□ 0.87
SLC52A1-201ENST00000254853 C1orf141Q5JVX7 400 aa20.46■□□□□ 0.87
SLC52A1-201ENST00000254853 NECAB1Q8N987 351 aa20.46■□□□□ 0.87
SLC52A1-201ENST00000254853 KCNH5Q8NCM2 988 aa20.46■□□□□ 0.87
SLC52A1-201ENST00000254853 FAM227BQ96M60 508 aa20.46■□□□□ 0.87
SLC52A1-201ENST00000254853 RBM8AQ9Y5S9 174 aaKnown RBP20.46■□□□□ 0.87
SLC52A1-201ENST00000254853 ADCY5O95622 1261 aa20.45■□□□□ 0.86
SLC52A1-201ENST00000254853 AMOTQ4VCS5 1084 aa20.45■□□□□ 0.86
SLC52A1-201ENST00000254853 SUCLG2Q96I99 432 aa20.45■□□□□ 0.86
SLC52A1-201ENST00000254853 ZNF830Q96NB3 372 aaPredicted RBP20.45■□□□□ 0.86
SLC52A1-201ENST00000254853 SASH1O94885 1247 aa20.45■□□□□ 0.86
SLC52A1-201ENST00000254853 CREB3L3Q68CJ9 461 aa20.45■□□□□ 0.86
SLC52A1-201ENST00000254853 GIMAP6Q6P9H5 292 aa20.45■□□□□ 0.86
SLC52A1-201ENST00000254853 KAZALD1Q96I82 304 aa20.45■□□□□ 0.86
SLC52A1-201ENST00000254853 NMIQ13287 307 aaPredicted RBP20.44■□□□□ 0.86
SLC52A1-201ENST00000254853 ESCO1Q5FWF5 840 aa20.44■□□□□ 0.86
SLC52A1-201ENST00000254853 EAF2Q96CJ1 260 aaPredicted RBP20.44■□□□□ 0.86
SLC52A1-201ENST00000254853 ADGRL3Q9HAR2 1447 aa20.44■□□□□ 0.86
SLC52A1-201ENST00000254853 FER1L4A9Z1Z3 1794 aa20.44■□□□□ 0.86
SLC52A1-201ENST00000254853 VPS37CA5D8V6 355 aaPredicted RBP20.44■□□□□ 0.86
SLC52A1-201ENST00000254853 ZKSCAN1P17029 563 aaPredicted RBP20.44■□□□□ 0.86
SLC52A1-201ENST00000254853 SASS6Q6UVJ0 657 aa20.44■□□□□ 0.86
SLC52A1-201ENST00000254853 FUCA2Q9BTY2 467 aa20.44■□□□□ 0.86
SLC52A1-201ENST00000254853 CCDC8Q9H0W5 538 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms